molgenis/vibe issues and pull requests

#34 - Benchmark disease-related performance across tools

Issue - State: open - Opened by joerivandervelde over 4 years ago
Labels: enhancement

#34 - Benchmark disease-related performance across tools

Issue - State: open - Opened by joerivandervelde over 4 years ago
Labels: enhancement

#34 - Benchmark disease-related performance across tools

Issue - State: open - Opened by joerivandervelde over 4 years ago
Labels: enhancement

#33 - Provide PPV metric for output genes

Issue - State: open - Opened by joerivandervelde over 4 years ago
Labels: enhancement

#33 - Provide PPV metric for output genes

Issue - State: open - Opened by joerivandervelde over 4 years ago
Labels: enhancement

#32 - Update README.md

Pull Request - State: closed - Opened by joerivandervelde over 4 years ago - 1 comment

#32 - Update README.md

Pull Request - State: closed - Opened by joerivandervelde over 4 years ago - 1 comment

#31 - Tdb changes & adjustments to output

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 2 comments

#31 - Tdb changes & adjustments to output

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 2 comments

#31 - Tdb changes & adjustments to output

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 2 comments

#30 - HOOM RDF/XML download link not version-specific

Issue - State: open - Opened by svandenhoek over 4 years ago

#29 - Database version validation

Issue - State: open - Opened by svandenhoek over 4 years ago - 1 comment
Labels: enhancement

#28 - New TDB, added gene-symbols to output & unit-test fixes.

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 3 comments

#27 - Tdb creation automation

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 2 comments

#27 - Tdb creation automation

Pull Request - State: closed - Opened by svandenhoek over 4 years ago - 2 comments

#26 - Allow for using ORDO terms as input

Issue - State: open - Opened by svandenhoek over 4 years ago

#25 - Automatically include alternative HPO id's

Issue - State: open - Opened by svandenhoek over 4 years ago - 1 comment
Labels: bug, enhancement

#25 - Automatically include alternative HPO id's

Issue - State: open - Opened by svandenhoek over 4 years ago - 1 comment
Labels: bug, enhancement

#24 - New output writer + Docker update

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago - 2 comments

#24 - New output writer + Docker update

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago - 2 comments

#23 - Jenkinsfile related adjustments

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#23 - Jenkinsfile related adjustments

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#22 - Sonar gives 0% code coverage

Issue - State: closed - Opened by svandenhoek almost 5 years ago - 1 comment

#22 - Sonar gives 0% code coverage

Issue - State: closed - Opened by svandenhoek almost 5 years ago - 1 comment

#21 - Jenkins & Docker

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#20 - Additional SPARQL scripts.

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#20 - Additional SPARQL scripts.

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#19 - Fixed incorrect maven versioning.

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#19 - Fixed incorrect maven versioning.

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#18 - TestNGPreprocessing fails on windows

Issue - State: closed - Opened by bartcharbon almost 5 years ago - 1 comment
Labels: bug

#18 - TestNGPreprocessing fails on windows

Issue - State: closed - Opened by bartcharbon almost 5 years ago - 1 comment
Labels: bug

#18 - TestNGPreprocessing fails on windows

Issue - State: closed - Opened by bartcharbon almost 5 years ago - 1 comment
Labels: bug

#17 - IO adjustments + Maven version update

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago - 4 comments

#17 - IO adjustments + Maven version update

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago - 4 comments

#16 - Enforce correct output file extension

Issue - State: open - Opened by svandenhoek almost 5 years ago
Labels: enhancement

#16 - Enforce correct output file extension

Issue - State: open - Opened by svandenhoek almost 5 years ago
Labels: enhancement

#16 - Enforce correct output file extension

Issue - State: open - Opened by svandenhoek almost 5 years ago
Labels: enhancement

#15 - Revamped package structure

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#14 - Improved database/querying (+ additional changes).

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#14 - Improved database/querying (+ additional changes).

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#13 - Minor adjustments to readme unit-testing preprocessing script

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#13 - Minor adjustments to readme unit-testing preprocessing script

Pull Request - State: closed - Opened by svandenhoek almost 5 years ago

#12 - Update README.md

Pull Request - State: closed - Opened by joerivandervelde almost 5 years ago

#12 - Update README.md

Pull Request - State: closed - Opened by joerivandervelde almost 5 years ago

#12 - Update README.md

Pull Request - State: closed - Opened by joerivandervelde almost 5 years ago

#11 - Fixed code compiling using Java11 and command line fix

Pull Request - State: closed - Opened by svandenhoek about 5 years ago - 2 comments

#11 - Fixed code compiling using Java11 and command line fix

Pull Request - State: closed - Opened by svandenhoek about 5 years ago - 2 comments

#11 - Fixed code compiling using Java11 and command line fix

Pull Request - State: closed - Opened by svandenhoek about 5 years ago - 2 comments

#10 - Build failure using Java v11

Issue - State: closed - Opened by svandenhoek about 5 years ago
Labels: bug

#9 - Possible fix for build fail issue

Pull Request - State: closed - Opened by svandenhoek over 5 years ago

#9 - Possible fix for build fail issue

Pull Request - State: closed - Opened by svandenhoek over 5 years ago

#9 - Possible fix for build fail issue

Pull Request - State: closed - Opened by svandenhoek over 5 years ago

#8 - Could not find artifact com.github.jsonld-java.jsonld-java:jsonld-java:bundle:0.11.1

Issue - State: closed - Opened by dennishendriksen over 5 years ago - 1 comment
Labels: bug

#8 - Could not find artifact com.github.jsonld-java.jsonld-java:jsonld-java:bundle:0.11.1

Issue - State: closed - Opened by dennishendriksen over 5 years ago - 1 comment
Labels: bug

#8 - Could not find artifact com.github.jsonld-java.jsonld-java:jsonld-java:bundle:0.11.1

Issue - State: closed - Opened by dennishendriksen over 5 years ago - 1 comment
Labels: bug

#7 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#7 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#7 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#6 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#6 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#6 - Update readme

Pull Request - State: closed - Opened by joerivandervelde over 5 years ago

#5 - README adjustments

Pull Request - State: closed - Opened by svandenhoek almost 6 years ago

#5 - README adjustments

Pull Request - State: closed - Opened by svandenhoek almost 6 years ago

#4 - Better handling exception & minor cleanup/documentation of test code

Pull Request - State: closed - Opened by svandenhoek about 6 years ago

#3 - Additional scores added (can be used for prioritization).

Pull Request - State: closed - Opened by svandenhoek about 6 years ago

#2 - New DisGeNET data retrieval and additional features/adjustments (such as HPO retrieval using ontology).

Pull Request - State: closed - Opened by svandenhoek over 6 years ago

#1 - Initial implementation

Pull Request - State: closed - Opened by svandenhoek over 6 years ago

GitHub / molgenis/vibe issues and pull requests