molgenis/molgenis-r-datashield issues and pull requests

#90 - Throw proper error when loading workspace over 2GBs

Issue - State: closed - Opened by marikaris 2 months ago

#89 - chore: make CI bump version number in description

Pull Request - State: closed - Opened by timcadman 4 months ago - 1 comment

#88 - fix: return correct error message when workspace doesn't exist

Pull Request - State: closed - Opened by timcadman 4 months ago - 1 comment

#87 - Feature request: datashield.workspace_restore

Issue - State: open - Opened by davraam 5 months ago

#86 - fix: cran

Pull Request - State: closed - Opened by timcadman 5 months ago - 1 comment

#85 - fix: prep release 2.0.8

Pull Request - State: closed - Opened by marikaris 5 months ago - 1 comment

#84 - Output of DSI::datashield.workspaces() function with Armadillo servers

Issue - State: closed - Opened by davraam 5 months ago - 1 comment

#83 - When assigning tables whilst logging in, two extra objects are created

Issue - State: open - Opened by timcadman 5 months ago - 1 comment

#82 - As a developer I would like version numbers in description to be bumped on PR merge

Issue - State: closed - Opened by timcadman 5 months ago

#81 - As a researcher I would like Armadillo to return errors in the same format as Opal

Issue - State: closed - Opened by clemens-tolboom 9 months ago - 15 comments
Labels: enhancement

#80 - As a developer, I would like to use httr2 for API calls

Issue - State: closed - Opened by marikaris 5 months ago - 1 comment

#79 - chore: add cache back in to CI

Pull Request - State: closed - Opened by timcadman 5 months ago - 1 comment

#78 - fix: align error handling with opal

Pull Request - State: closed - Opened by timcadman 6 months ago - 2 comments

#77 - chore: fix circle CI

Pull Request - State: closed - Opened by timcadman 6 months ago - 1 comment

#76 - docs: simplified to make only relevant to this package

Pull Request - State: closed - Opened by timcadman 6 months ago - 1 comment

#75 - Fix: list methods

Pull Request - State: closed - Opened by timcadman 6 months ago - 2 comments

#74 - docs: add warning for saving big workspaces

Pull Request - State: closed - Opened by marikaris 6 months ago

#73 - datashield.assign.resource returns unhelpful error message if user does have access to resource

Issue - State: open - Opened by timcadman 9 months ago

#72 - When using datashield.assign, no message is returned if trying to assign variables which you don't have access to

Issue - State: open - Opened by timcadman 9 months ago

#71 - When using Armadillo, `datashield.assign` does not return an error when attempting to assign a table that does not exist, if an object with the same name as 'symbol' already exists in the R environment

Issue - State: open - Opened by timcadman 9 months ago

#70 - build: replace jenkins with circleci

Pull Request - State: closed - Opened by marikaris about 1 year ago

#69 - Build/jenkins to circleci

Pull Request - State: closed - Opened by marikaris about 1 year ago

#68 - chore: update and fix vignettes

Pull Request - State: closed - Opened by marikaris about 1 year ago - 1 comment

#67 - Update DESCRIPTION

Pull Request - State: closed - Opened by marikaris about 1 year ago

#66 - chore: fix cran comments and description (for real)

Pull Request - State: closed - Opened by marikaris about 1 year ago - 2 comments

#65 - Revert "Revert "chore: update cran comments""

Pull Request - State: closed - Opened by marikaris about 1 year ago

#64 - Revert "chore: update cran comments"

Pull Request - State: closed - Opened by marikaris about 1 year ago

#63 - chore: update cran comments

Pull Request - State: closed - Opened by marikaris about 1 year ago - 1 comment
Labels: hacktoberfest-accepted

#62 - Use connection instead of handle.

Pull Request - State: closed - Opened by clemens-tolboom about 1 year ago - 1 comment

#61 - Update README.md

Pull Request - State: closed - Opened by marikaris over 1 year ago

#60 - chore: armadillo 3 compatibility

Pull Request - State: closed - Opened by marikaris almost 2 years ago

#59 - fix(jenkinsfile): dubious ownership error

Pull Request - State: closed - Opened by marikaris almost 2 years ago

#58 - Prepare for Armadillo 3.0

Pull Request - State: closed - Opened by tommydeboer almost 2 years ago

#57 - More informative error messages when loading workspace which doesn't exist

Issue - State: closed - Opened by timcadman over 3 years ago - 1 comment
Labels: enhancement

#56 - If an SSL error would occur then Armadillo Client should provide more informational error message

Issue - State: open - Opened by christianhilbrands over 2 years ago
Labels: enhancement, molgenis-r-datashield

#55 - Update cran-comments.md

Pull Request - State: closed - Opened by marikaris over 2 years ago - 1 comment

#54 - chore: move to external pod template and change maintainer to Mariska

Pull Request - State: closed - Opened by sidohaakma over 2 years ago - 1 comment

#53 - Add vignettes for profiles

Issue - State: open - Opened by sidohaakma about 3 years ago
Labels: enhancement

#52 - feat: profiles

Pull Request - State: closed - Opened by sidohaakma about 3 years ago
Labels: hacktoberfest-accepted

#51 - feat: add profiles

Pull Request - State: closed - Opened by fdlk about 3 years ago - 1 comment

#50 - fix: styling errors in tests and ArmadilloResult

Pull Request - State: closed - Opened by sidohaakma about 3 years ago - 1 comment

#49 - fix: endless loop in FAILING request

Pull Request - State: closed - Opened by sidohaakma about 3 years ago - 1 comment

#48 - fix: added .handle_last_command to isCompleted function to prevent infinite loops when status is FAILED

Pull Request - State: closed - Opened by sidohaakma about 3 years ago - 1 comment

#47 - fix: make sido maintainer

Pull Request - State: closed - Opened by fdlk about 3 years ago - 1 comment

#46 - When exceuting datashield.pkg_status() and datashield.pkg_version() it is not giving the expected output

Issue - State: closed - Opened by sidohaakma over 3 years ago - 4 comments
Labels: bug

#45 - chore(travis): add obiba repo

Pull Request - State: closed - Opened by fdlk over 3 years ago - 2 comments

#44 - chore: use inheritFrom instead of label

Pull Request - State: closed - Opened by sidohaakma over 3 years ago - 2 comments

#43 - feat: implement DSI 1.2 methods

Pull Request - State: closed - Opened by fdlk over 3 years ago - 2 comments

#42 - fix(ArmadilloResult): let dsGetInfo await completion

Pull Request - State: closed - Opened by fdlk about 4 years ago - 1 comment

#41 - dsGetInfo should await result

Issue - State: closed - Opened by fdlk about 4 years ago

#40 - chore: point to dev registry

Pull Request - State: closed - Opened by sidohaakma about 4 years ago - 2 comments

#39 - feat: implement resource methods

Pull Request - State: closed - Opened by fdlk about 4 years ago - 1 comment

#38 - chore: moved some parts to readme and seperate workspaces vignette

Pull Request - State: closed - Opened by sidohaakma about 4 years ago - 1 comment

#37 - docs/rewrite vignettes

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 5 comments

#36 - feat: file per table

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#35 - doc: add package docs

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#34 - chore: remove DSI from first install

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#33 - feat: add molgenis auth as dep

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 3 comments

#32 - chore: add orcid

Pull Request - State: closed - Opened by fdlk over 4 years ago

#31 - docs: add vignette

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#30 - feat: login using token

Pull Request - State: closed - Opened by fdlk over 4 years ago - 2 comments

#29 - Fix httr URL issues

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#28 - Update test script to use new login method

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#27 - Cannot assign data with DSMolgenisArmadillo

Issue - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#26 - fix: column renames

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#25 - Remove TODO

Pull Request - State: closed - Opened by tommydeboer over 4 years ago

#24 - test/need moar tests

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#23 - test/keep up the good work

Pull Request - State: closed - Opened by fdlk over 4 years ago - 2 comments

#22 - Create unit tests, first batch

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#21 - chore: rename the package to DSMolgenisArmadillo

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 5 comments
Labels: enhancement

#20 - doc: fix documentation warnings

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#19 - feat/info

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#18 - style: style using tidyverse styling

Pull Request - State: closed - Opened by fdlk over 4 years ago

#17 - chore: lint using forked lintr that detects jenkins

Pull Request - State: closed - Opened by fdlk over 4 years ago - 2 comments

#16 - chore/lint comments

Pull Request - State: closed - Opened by fdlk over 4 years ago - 3 comments

#15 - Use new methods endpoint

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#14 - Friendly error message when workspace is not accessible

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#13 - fix: expr to string fails, can be call as well

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#12 - fix: restore endpoint needs to be called with request param instead o…

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#11 - Apply lintr and run it at build time

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#10 - Partially implement DSI methods concerning symbols

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 2 comments

#9 - feat: add retry after timeout

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#8 - feat: implement async flow

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment
Labels: enhancement

#7 - feat: added async flow on aggregate function

Pull Request - State: closed - Opened by sidohaakma over 4 years ago

#6 - feat: use content negotiation in aggregate method

Pull Request - State: closed - Opened by fdlk over 4 years ago - 1 comment

#5 - Add stubs for all DSI methods and improve the docs

Pull Request - State: closed - Opened by tommydeboer over 4 years ago - 1 comment

#4 - feat: add symbol assignment

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#3 - fix: added ci and parsed the "raw" result

Pull Request - State: closed - Opened by sidohaakma over 4 years ago - 1 comment

#2 - Use /exists endpoint in dsHasTable

Pull Request - State: closed - Opened by tommydeboer over 4 years ago

#1 - Project setup

Pull Request - State: closed - Opened by tommydeboer over 4 years ago

GitHub / molgenis/molgenis-r-datashield issues and pull requests