mojaveazure/seurat-object issues and pull requests

#72 - Fix FetchData.StdAssay column order

Pull Request - State: closed - Opened by AustinHartman almost 2 years ago

#71 - fix VariableFeaturePlot command search bug

Pull Request - State: closed - Opened by AustinHartman almost 2 years ago

#70 - Standard updates

Pull Request - State: closed - Opened by mojaveazure almost 2 years ago

#69 - Feat/rename

Pull Request - State: closed - Opened by mojaveazure almost 2 years ago

#68 - SeuratObject v4.1.3

Pull Request - State: closed - Opened by mojaveazure almost 2 years ago

#67 - Allow as.sparse conversion of character matrix

Pull Request - State: closed - Opened by timoast almost 2 years ago

#66 - add subset cells dim reduc

Pull Request - State: closed - Opened by yuhanH almost 2 years ago

#65 - Add .PropagateList

Pull Request - State: closed - Opened by yuhanH almost 2 years ago

#64 - reorder cell embeddings

Pull Request - State: closed - Opened by yuhanH almost 2 years ago

#63 - Move {rgeos} to Suggests

Pull Request - State: closed - Opened by mojaveazure almost 2 years ago
Labels: enhancement

#62 - Default random seed in WhichCells prevents random sampling with []

Issue - State: open - Opened by nicolaromano almost 2 years ago - 1 comment

#61 - fix segmentation subset method

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#60 - Add missing Keys in UpdateSeuratObject

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#59 - fix error for Crops() with 0 cells

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#58 - Release 4.1.2

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#57 - Release 4.1.1

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#56 - visualization updates

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#55 - Feat/doc5 update

Pull Request - State: closed - Opened by yuhanH about 2 years ago

#54 - Updates to standard branch

Pull Request - State: open - Opened by timoast about 2 years ago

#53 - Feat/docs5 dollar

Pull Request - State: closed - Opened by yuhanH about 2 years ago

#52 - Feat/standard dollar

Pull Request - State: closed - Opened by yuhanH about 2 years ago

#51 - SeuratObject install fails with segfault

Issue - State: open - Opened by TDCasasent about 2 years ago

#50 - Updates for Matrix 1.4.2

Pull Request - State: closed - Opened by AustinHartman about 2 years ago

#49 - Feature request for atlas analyses - port DelayedArray to Seurat

Issue - State: open - Opened by stemangiola over 2 years ago - 1 comment

#48 - Move rgeos to suggests

Issue - State: closed - Opened by mojaveazure over 2 years ago - 1 comment
Labels: enhancement

#47 - Feat/stand supp

Pull Request - State: closed - Opened by yuhanH over 2 years ago

#46 - CI fix: Install geos library on linux

Pull Request - State: closed - Opened by aaronwolen over 2 years ago - 1 comment

#45 - SeuratObject v4.1.0

Pull Request - State: closed - Opened by mojaveazure over 2 years ago

#44 - Prep release 4.1.0

Pull Request - State: closed - Opened by mojaveazure over 2 years ago

#43 - Support for imaging-based spatial datasets

Pull Request - State: closed - Opened by mojaveazure over 2 years ago

#42 - Fix issue with R-devel 4.3.x

Pull Request - State: closed - Opened by mojaveazure over 2 years ago

#41 - The vapply error strikes again: values must be length 1, but FUN(X[[2]]) result is length 0 (Issue #1072)

Issue - State: open - Opened by LilianaLucca over 2 years ago

#40 - fix the error message

Pull Request - State: closed - Opened by DawnEve over 2 years ago

#39 - Cannot `RenameCells` if only 1 cell

Issue - State: open - Opened by JZL over 2 years ago

#38 - Allow UpdateAssay to work when `data` is NULL

Pull Request - State: closed - Opened by milescsmith over 2 years ago - 1 comment

#37 - is column order guaranteed when adding new assay to Seurat object

Issue - State: closed - Opened by rhodesch almost 3 years ago

#36 - Add pkgdown url

Pull Request - State: closed - Opened by timoast almost 3 years ago

#35 - SeuratObject v4.0.4

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago

#34 - Prep release 4.0.4

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago

#33 - Unable to install SeuratObject_4.0.2

Issue - State: open - Opened by chzh1418 almost 3 years ago

#32 - Avoid warning when creating assay from non-dgCMatrix

Pull Request - State: closed - Opened by timoast almost 3 years ago

#31 - Add matrix checks

Pull Request - State: closed - Opened by timoast almost 3 years ago - 1 comment

#30 - Fix website address

Pull Request - State: closed - Opened by timoast almost 3 years ago

#29 - Set key when creating Seurat objects from Assays

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago - 2 comments

#28 - SeuratObject v4.0.3

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago

#27 - Prep release 4.0.3

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago

#26 - Fix allowing duplicate keys

Pull Request - State: closed - Opened by mojaveazure almost 3 years ago

#25 - Warning when calling SpatiallyVariableFeatures

Issue - State: open - Opened by johnyaku about 3 years ago - 3 comments

#24 - subset cell order

Pull Request - State: closed - Opened by yuhanH about 3 years ago

#23 - Fix/create s5

Pull Request - State: closed - Opened by yuhanH about 3 years ago

#22 - Export new utility functions

Pull Request - State: closed - Opened by mojaveazure about 3 years ago

#21 - swap dispersion to third col

Pull Request - State: closed - Opened by yuhanH about 3 years ago

#20 - Error when using as.Seurat function

Issue - State: open - Opened by bapoorva about 3 years ago - 1 comment

#19 - Fail to merge large objects

Issue - State: closed - Opened by GreenGilad over 3 years ago - 6 comments

#18 - Can't install the package!

Issue - State: closed - Opened by AidenSb over 3 years ago - 2 comments

#17 - SeuratObject v4.0.2

Pull Request - State: closed - Opened by mojaveazure over 3 years ago

#16 - Fix issue with CheckDots

Pull Request - State: closed - Opened by mojaveazure over 3 years ago

#15 - CreateSeuratObject fails when counts is a matrix

Issue - State: closed - Opened by lazappi over 3 years ago - 4 comments

#14 - ReadRDS and Seurat-object

Issue - State: open - Opened by ice4prince over 3 years ago - 25 comments

#13 - Newly Introduced Warning

Issue - State: closed - Opened by bbimber over 3 years ago - 2 comments

#12 - SeuratObject v4.0.1

Pull Request - State: closed - Opened by mojaveazure over 3 years ago

#11 - Fix issue with update Matrix package

Pull Request - State: closed - Opened by mojaveazure over 3 years ago

#10 - no slot scale.data in SCT assay after merge

Issue - State: closed - Opened by mAGLAVE over 3 years ago - 1 comment

#9 - Enable support for zero-cell subsetting

Pull Request - State: closed - Opened by mojaveazure over 3 years ago - 1 comment
Labels: enhancement

#8 - Throw a warning message when pulling metadata with the same name as a feature

Pull Request - State: closed - Opened by mojaveazure over 3 years ago - 2 comments
Labels: enhancement

#7 - improve error message

Pull Request - State: closed - Opened by yuhanH over 3 years ago
Labels: enhancement

#3 - Add possibility to rename features

Issue - State: open - Opened by frederikziebell over 3 years ago - 4 comments
Labels: enhancement

GitHub / mojaveazure/seurat-object issues and pull requests