Ecosyste.ms: Issues

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GitHub / mohuangx/SAVER issues and pull requests

#41 - Error with R4.0+

Issue - State: closed - Opened by danielgreenwood 3 months ago - 2 comments

#40 - Subsetting Dataset

Issue - State: closed - Opened by sylvia-science 9 months ago - 2 comments

#38 - Error in class() examination while using SAVER

Issue - State: open - Opened by avsarg almost 2 years ago - 2 comments

#37 - Tutorial doesn't work

Issue - State: closed - Opened by inoue0426 about 2 years ago - 3 comments

#36 - Can't install this module

Issue - State: closed - Opened by inoue0426 about 2 years ago - 4 comments

#35 - is it possible to do correlation analyses without running the correction

Issue - State: open - Opened by hk20013106 about 2 years ago - 1 comment

#34 - nFeatureRNA value became zero for all cells

Issue - State: open - Opened by Lumskie over 2 years ago - 1 comment

#33 - Error when I use SAVER with size.factor =1

Issue - State: open - Opened by ScarletChieftain over 2 years ago - 3 comments

#32 - Problem running SAVER on large dataset

Issue - State: open - Opened by RomiGoldner almost 3 years ago - 4 comments

#31 - Error in serialize(data, node$con) : error writing to connection

Issue - State: open - Opened by stingo93 almost 3 years ago - 1 comment

#30 - Error in is.data.frame(x) : object 'mu' not found

Issue - State: open - Opened by zji90 about 3 years ago - 4 comments

#29 - Error in checkForRemoteErrors(lapply(cl, recvResult))

Issue - State: open - Opened by ZhengJIN94 about 3 years ago - 2 comments

#28 - Error reading from connection

Issue - State: closed - Opened by arielah about 3 years ago - 2 comments

#27 - Saver in docker

Issue - State: closed - Opened by alessandriLuca over 3 years ago - 2 comments

#26 - problem too large error in rowMeans inside saver()

Issue - State: open - Opened by vertesy over 3 years ago - 4 comments

#25 - questions about prior variance optimization step

Issue - State: closed - Opened by KangchengHou over 4 years ago - 6 comments

#24 - Error in lm.fit ... 0 (non-NA) cases

Issue - State: open - Opened by mbernste almost 5 years ago - 3 comments

#23 - Input and Output

Issue - State: closed - Opened by Winnie09 over 5 years ago - 1 comment

#22 - Difference in output while using all genes vs using pred.genes

Issue - State: closed - Opened by ravipatel4 over 5 years ago - 1 comment

#21 - SAVER vs Seurat normalization

Issue - State: closed - Opened by igordot over 5 years ago - 7 comments

#20 - SAVER fails when using multi-threading.

Issue - State: closed - Opened by LuyiTian over 5 years ago - 11 comments

#19 - SAVER keeps crashing due to non-finite values

Issue - State: closed - Opened by jamesrhowe over 5 years ago - 2 comments

#18 - Question: Integration in Seurat workflow?

Issue - State: closed - Opened by tilofrei over 5 years ago - 4 comments

#17 - Error in UseMethod("units<-") :

Issue - State: closed - Opened by joonlee3 over 5 years ago - 1 comment

#16 - Error in cbind2(1, newx) : object 'newx' not found

Issue - State: closed - Opened by mkywall over 5 years ago - 1 comment

#15 - Correlation cutoff to increase speed

Issue - State: closed - Opened by zji90 almost 6 years ago - 1 comment

#14 - Less total expression after saver?

Issue - State: closed - Opened by ericvon11 almost 6 years ago - 2 comments

#13 - Is SAVER output compatible with typical scRNAseq analyses

Issue - State: closed - Opened by ravipatel4 almost 6 years ago - 2 comments

#12 - Patch 1

Pull Request - State: closed - Opened by bharris12 almost 6 years ago - 2 comments

#11 - Error while running SAVER

Issue - State: closed - Opened by ravipatel4 almost 6 years ago - 2 comments

#10 - Cell selection

Issue - State: closed - Opened by dylanmr about 6 years ago - 2 comments

#9 - Output of estimated prior parameters

Issue - State: closed - Opened by WT215 about 6 years ago - 2 comments

#8 - A query about the detailed procedure for filtering Drop seq data

Issue - State: closed - Opened by WT215 about 6 years ago - 5 comments

#7 - combine.saver() : object 'x' not found

Issue - State: closed - Opened by bvieth about 6 years ago - 1 comment

#6 - Error: number of items to replace is not a multiple of replacement length

Issue - State: closed - Opened by XueyiDong about 6 years ago - 1 comment

#5 - 10x_HDF5 format support

Issue - State: closed - Opened by radio1988 over 6 years ago - 6 comments

#4 - A bug detected

Issue - State: closed - Opened by WT215 over 6 years ago - 4 comments

#3 - missing entries in NAMESPACE file

Issue - State: closed - Opened by bvieth over 6 years ago - 2 comments

#2 - Any speed optimization planned for large datasets?

Issue - State: closed - Opened by FloWuenne over 6 years ago - 2 comments

#1 - error in optimize

Issue - State: closed - Opened by mcieslik-mctp about 7 years ago - 35 comments