mne-tools/mne-connectivity issues and pull requests

#275 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 9 days ago - 1 comment

#274 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 16 days ago

#273 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago

#272 - Fix spelling error in `spectral_connectivity_epochs` docstring

Pull Request - State: closed - Opened by tsbinns about 1 month ago

#271 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago

#270 - remove crufty conditional

Pull Request - State: closed - Opened by drammock about 1 month ago - 1 comment

#269 - azure pipelines installs wrong Python version

Issue - State: closed - Opened by drammock about 1 month ago

#268 - [MAINT] Add missing changelog entries

Pull Request - State: closed - Opened by tsbinns about 1 month ago - 2 comments

#267 - unpin website theme

Pull Request - State: closed - Opened by drammock about 1 month ago - 5 comments

#266 - Add note in doc

Pull Request - State: open - Opened by ruuskas about 1 month ago

#265 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago

#264 - [MAINT] Clean up CI pins

Pull Request - State: closed - Opened by tsbinns about 1 month ago - 1 comment

#263 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 months ago

#262 - Add option to set colorbar ticks and label in `plot_connectivity_circle`

Issue - State: closed - Opened by ruuskas about 2 months ago - 7 comments

#261 - fix version on website

Pull Request - State: closed - Opened by drammock about 2 months ago - 2 comments

#260 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 months ago

#259 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 2 months ago

#258 - Bump codecov/codecov-action from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#257 - [MAINT] Remove deprecated plotting parameters

Pull Request - State: open - Opened by tsbinns 2 months ago

#256 - [DOC, BUG] Incorrect version shown in dev documentation

Issue - State: closed - Opened by tsbinns 2 months ago

#255 - [DOC] `subplot` parameter in `plot_connectivity_circle` is supposed to be deprecated

Issue - State: open - Opened by tsbinns 2 months ago - 5 comments

#254 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 2 months ago

#253 - mne_connectivity.viz.plot_connectivity_circle: Don't render figure until all axes are created when using the ax argument

Issue - State: open - Opened by JohannesWiesner 3 months ago - 3 comments

#252 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago

#251 - Within-epoch surrogate generation

Issue - State: open - Opened by seqasim 3 months ago - 8 comments

#250 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago

#249 - Don't plot nan values in mne-connectivity.viz.plot_connectivity_circle

Issue - State: closed - Opened by JohannesWiesner 3 months ago - 2 comments

#248 - Plotting connectivity matrices with both negative and positive values should change default colorbar

Issue - State: open - Opened by JohannesWiesner 3 months ago - 17 comments

#247 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 3 months ago

#246 - Allow to plot asymmetric connectivity matrix with mne-connectivity.viz.plot_connectivity_circle

Issue - State: open - Opened by JohannesWiesner 3 months ago - 5 comments

#245 - Allow to plot multiple node colors in mne_connectivity.viz.plot_connectivity_circle

Issue - State: open - Opened by JohannesWiesner 3 months ago - 2 comments

#244 - add categorical legend to mne_connectivity.viz.plot_connectivity_circle so node_colors can be interpreted

Issue - State: open - Opened by JohannesWiesner 3 months ago - 4 comments

#243 - Option to implement Granger causality analysis from the time domain?

Issue - State: open - Opened by an99xf 3 months ago - 1 comment

#242 - [DOC] Improve documentation of freqs

Pull Request - State: closed - Opened by richardkoehler 3 months ago - 1 comment

#241 - [DOC] Use `sphinx_gallery_multi_image` in decomposition example

Pull Request - State: closed - Opened by tsbinns 4 months ago - 1 comment

#240 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago

#239 - Bump mamba-org/setup-micromamba from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#238 - Remove `mne-bids` dev branch in CI when v0.16 released

Issue - State: closed - Opened by tsbinns 4 months ago - 1 comment

#237 - [MAINT] Fix hanging micromamba in CI

Pull Request - State: closed - Opened by tsbinns 4 months ago - 4 comments

#236 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago - 1 comment

#235 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago

#234 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago - 2 comments

#232 - [GSOC] Add `EpochsTFR` support to spectral connectivity functions

Pull Request - State: open - Opened by tsbinns 5 months ago - 7 comments

#230 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago

#229 - Update version number and date in `CITATION.cff` on v0.8 release

Issue - State: open - Opened by tsbinns 5 months ago

#228 - [MAINT] Upgrade from Python 3.9 to 3.10

Pull Request - State: closed - Opened by tsbinns 5 months ago - 2 comments

#227 - unpin pytest

Pull Request - State: closed - Opened by drammock 5 months ago - 1 comment

#226 - Enhance plotting features

Issue - State: open - Opened by tsbinns 6 months ago

#225 - GSOC Cleanup: Add `EpochsTFR` support to `spectral_connectivity_epochs()` and `spectral_connectivity_time()`

Issue - State: open - Opened by tsbinns 6 months ago

#224 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#223 - [GSOC] Add surrogate data generation for significant connectivity estimation

Pull Request - State: closed - Opened by tsbinns 6 months ago - 11 comments

#222 - [MAINT] Give intersphinx links explicit roles

Issue - State: open - Opened by tsbinns 6 months ago

#221 - [BUG, ENH] Improve error checking of `plot_sensors_connectivity` and add a `min_distance` parameter

Pull Request - State: closed - Opened by tsbinns 6 months ago - 1 comment

#220 - [GSOC] Add support for `EpochsSpectrum` objects in `spectral_connectivity_epochs`

Pull Request - State: closed - Opened by tsbinns 6 months ago - 10 comments

#219 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago

#218 - [DOC] Switch Granger causality to expected failing example

Pull Request - State: closed - Opened by tsbinns 6 months ago - 1 comment

#217 - [MAINT] Add `plot_sensors_connectivity` data shape check

Pull Request - State: closed - Opened by tsbinns 6 months ago - 1 comment

#216 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago

#215 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago

#214 - [DOC] Update functon-container cross-references and fix incorrect types

Pull Request - State: closed - Opened by tsbinns 7 months ago - 2 comments

#213 - [GSOC] Add support for multiple components of multivariate connectivity

Pull Request - State: closed - Opened by tsbinns 7 months ago - 7 comments

#212 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago

#211 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago

#210 - Phase-slope index using spectral_connectivity_time instead of spectral_connectivity_epochs

Pull Request - State: open - Opened by seqasim 7 months ago - 8 comments

#209 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago

#208 - [GSOC] Add decomposition plotting

Pull Request - State: closed - Opened by tsbinns 7 months ago - 2 comments

#207 - v0.7 documentation unavailable

Issue - State: closed - Opened by tsbinns 7 months ago - 2 comments

#206 - [MAINT] Modernise super method calls

Pull Request - State: closed - Opened by tsbinns 7 months ago

#205 - [MAINT] Clean up string formatting

Pull Request - State: closed - Opened by tsbinns 7 months ago - 2 comments

#204 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago

#203 - [MAINT] Reminder: change call to super methods

Issue - State: closed - Opened by tsbinns 7 months ago - 1 comment

#202 - [MAINT] Reminder: switch to f-strings

Issue - State: closed - Opened by tsbinns 7 months ago - 1 comment

#201 - [MAINT] Replace np.matmul with @ operator

Pull Request - State: closed - Opened by tsbinns 7 months ago

#200 - MAINT: Switch to setuptools_scm for version

Pull Request - State: closed - Opened by larsoner 7 months ago - 3 comments

#199 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago

#198 - [MAINT] Add release workflow

Pull Request - State: closed - Opened by tsbinns 8 months ago

#197 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago

#196 - [MAINT] Retry improve clarity, thumbnails, and fix mistakes in multivariate examples

Pull Request - State: closed - Opened by tsbinns 8 months ago

#195 - [RELEASE] V0.7

Pull Request - State: closed - Opened by tsbinns 8 months ago

#194 - [MAINT] Improve clarity, thumbnails, and fix mistakes in multivariate examples

Pull Request - State: closed - Opened by tsbinns 8 months ago - 7 comments

#193 - [GSOC] Add decoding module

Pull Request - State: closed - Opened by tsbinns 8 months ago - 13 comments

#192 - [GSOC] Store multivariate connectivity filters

Pull Request - State: closed - Opened by tsbinns 8 months ago - 2 comments

#191 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 8 months ago

#190 - Bump actions/setup-python from 2 to 5

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#189 - Bump actions/checkout from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#188 - Bump codecov/codecov-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#187 - MAINT: Test on macOS arm64

Pull Request - State: closed - Opened by larsoner 8 months ago - 2 comments

#186 - [MAINT] Fix codespell error

Pull Request - State: closed - Opened by tsbinns 8 months ago - 2 comments

#185 - [MAINT] Add logic for handling AverageTFRArray in old MNE versions

Pull Request - State: closed - Opened by tsbinns 8 months ago - 3 comments

#184 - [ENH] Reduce compute time for multivariate coherency methods

Pull Request - State: closed - Opened by tsbinns 8 months ago - 11 comments

#183 - [GSOC] Expand multivariate methods to support >1 component

Issue - State: closed - Opened by tsbinns 8 months ago - 1 comment

#182 - [GSOC] Add a 'decoding' module to expand flexibility of multivariate methods

Issue - State: closed - Opened by tsbinns 8 months ago - 1 comment

#181 - Release v0.7

Issue - State: closed - Opened by adam2392 9 months ago - 18 comments

#180 - [DOC] Update install.rst to reflect pyproject.toml

Pull Request - State: closed - Opened by JonathanShor 9 months ago - 3 comments

#179 - avoid FutureWarning from zero_mean default change

Pull Request - State: closed - Opened by drammock 10 months ago - 1 comment

GitHub / mne-tools/mne-connectivity issues and pull requests