mmollina/MAPpoly issues and pull requests

#76 - The dataset used for the "Building a genetic map in a tetraploid potato full-sib population using MAPpoly" isn't specified

Issue - State: open - Opened by behling3 23 days ago

#75 - Septaploid organism

Issue - State: open - Opened by PhiliptheoD 5 months ago

#74 - Bug in make_seq_mappoly

Issue - State: open - Opened by jeekinlau 9 months ago - 1 comment

#73 - Testless

Pull Request - State: closed - Opened by mmollina 11 months ago

#72 - Genetic Map in diploid species

Issue - State: open - Opened by bechee 12 months ago - 4 comments

#71 - Fix linking to RcppParallel

Pull Request - State: closed - Opened by jeroen about 1 year ago

#70 - bugfix

Pull Request - State: closed - Opened by Cristianetaniguti about 1 year ago

#69 - New functions updates

Pull Request - State: closed - Opened by Cristianetaniguti about 1 year ago

#68 - update plot_progeny_dosage_change

Pull Request - State: closed - Opened by jeekinlau about 1 year ago

#67 - get_solcap_snp_pos.R not assigning markers per sequence

Issue - State: open - Opened by wrengs over 1 year ago

#66 - Improving calc_homologprob

Pull Request - State: closed - Opened by gabrielgesteira over 1 year ago - 1 comment

#65 - plot dosage changes by hmm chain

Pull Request - State: closed - Opened by jeekinlau over 1 year ago - 3 comments

#64 - New functions

Pull Request - State: closed - Opened by Cristianetaniguti over 1 year ago

#63 - est_rf_hmm_sequential error

Issue - State: open - Opened by kaurharpreet-umn over 1 year ago - 3 comments

#62 - Select more than 1 LG in make_seq_mappoly when group object

Pull Request - State: closed - Opened by Cristianetaniguti almost 2 years ago

#61 - Function to edit interactively the markers genomic order

Pull Request - State: closed - Opened by Cristianetaniguti almost 2 years ago

#60 - make_seq_mappoly by chromosome

Issue - State: open - Opened by txuemei almost 2 years ago

#59 - Does MAPpoly have an option for allotetraploids populations?

Issue - State: open - Opened by PaulaEB about 2 years ago - 6 comments

#58 - Best practice for Multiparent population (half-sibs)?

Issue - State: open - Opened by jjdevega about 2 years ago - 1 comment

#57 - fix test run

Pull Request - State: closed - Opened by Cristianetaniguti over 2 years ago

#56 - add marker genomic position info

Pull Request - State: closed - Opened by Cristianetaniguti over 2 years ago

#55 - read_geno_csv arguement not passing to table_to_mappoly

Issue - State: closed - Opened by jeekinlau over 2 years ago - 1 comment

#54 - import phased map from CSV

Issue - State: open - Opened by KillianLrnt over 2 years ago

#53 - Triploids coming from a cross-population

Issue - State: closed - Opened by KillianLrnt over 2 years ago - 2 comments

#52 - Using MAPpoly for potato population

Issue - State: closed - Opened by jxandyq almost 3 years ago - 4 comments

#51 - Small updates

Pull Request - State: closed - Opened by gabrielgesteira about 3 years ago - 3 comments

#50 - Updating hex sticker

Pull Request - State: closed - Opened by gabrielgesteira over 3 years ago

#49 - Updating output object of rf_2pt_rcpp_parallel

Pull Request - State: closed - Opened by gabrielgesteira over 3 years ago

#48 - Implementing rf parallel calculation in C++

Pull Request - State: closed - Opened by gabrielgesteira over 3 years ago

#47 - Error in ordering markers using MDS

Issue - State: closed - Opened by baozg over 3 years ago - 1 comment

#46 - using fread in data.table for speed up reading file

Issue - State: closed - Opened by baozg over 3 years ago - 1 comment

#45 - Can MAPpoly fit single generation of selfing population in tetraploidy potato？

Issue - State: closed - Opened by baozg over 3 years ago - 1 comment

#44 - est_rf_pairwise n.batches=1 and n.batches>1 gives different results

Issue - State: closed - Opened by jeekinlau over 3 years ago - 1 comment

#43 - Using MAPpoly for oats

Issue - State: closed - Opened by VianeiRother almost 4 years ago - 25 comments

#42 - Fixing Issue #41

Pull Request - State: closed - Opened by gabrielgesteira almost 4 years ago - 2 comments

#41 - Read csv file to start using mappoly

Issue - State: closed - Opened by Eduardo-Venske almost 4 years ago - 16 comments

#40 - Updating lazy load for CRAN

Pull Request - State: closed - Opened by gabrielgesteira almost 4 years ago

#39 - Fix CRAN + updates

Pull Request - State: closed - Opened by gabrielgesteira about 4 years ago - 1 comment

#37 - update gg hue

Pull Request - State: closed - Opened by mmollina about 4 years ago

#36 - Fix LD issue (CRAN)

Pull Request - State: closed - Opened by gabrielgesteira about 4 years ago

#35 - Genotype probabilities

Pull Request - State: closed - Opened by mmollina over 4 years ago

#34 - Bug fix on update_map

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago - 1 comment

#33 - Updating summary_maps and update_map

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago - 1 comment

#32 - Changes in read_vcf function

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago - 1 comment

#31 - Fixing Travis

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago - 1 comment

#30 - Fixing examples and Travis

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago - 1 comment

#29 - Fixing Travis error

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago

#28 - Some updates

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago

#27 - Some updates

Pull Request - State: closed - Opened by gabrielgesteira over 4 years ago