mlcommons/GaNDLF issues and pull requests

#975 - Version updated for development

Pull Request - State: closed - Opened by scap3yvt 9 days ago - 2 comments

#974 - [FEATURE] Improve code quality through Codacy

Issue - State: open - Opened by sarthakpati 9 days ago

#973 - Version updated for release

Pull Request - State: closed - Opened by scap3yvt 9 days ago - 2 comments

#972 - Update PyTorch to previous stable

Pull Request - State: closed - Opened by scap3yvt 9 days ago - 2 comments

#971 - Updated PyTorch to newer version

Pull Request - State: closed - Opened by scap3yvt 9 days ago - 2 comments

#970 - Added new optimizers

Pull Request - State: closed - Opened by scap3yvt 10 days ago - 2 comments

#969 - Pytorch Conda dependencies might stop working

Issue - State: closed - Opened by Geeks-Sid 15 days ago - 1 comment
Labels: documentation, dependencies

#968 - [FEATURE] Add new optimizers

Issue - State: closed - Opened by sarthakpati 17 days ago - 2 comments
Labels: enhancement

#967 - Add documentation about the log file parameter

Pull Request - State: closed - Opened by benmalef 20 days ago - 1 comment

#966 - Change the default logfile

Pull Request - State: closed - Opened by benmalef 20 days ago - 2 comments

#965 - Refactor the code related to loss computation

Pull Request - State: closed - Opened by szmazurek 20 days ago - 6 comments

#964 - Added a faq point for the version mismatch

Pull Request - State: closed - Opened by scap3yvt 24 days ago - 1 comment

#963 - [BUG] Logging is not flushing to console if `--log-file` is `None`

Issue - State: closed - Opened by sarthakpati 24 days ago - 11 comments

#962 - [FEATURE] Add documentation about ``--log-file`` usage

Issue - State: closed - Opened by sarthakpati 24 days ago - 1 comment

#961 - Version updated for development

Pull Request - State: closed - Opened by scap3yvt 29 days ago - 1 comment

#960 - Getting ready to tag new version with update dependencies

Pull Request - State: closed - Opened by sarthakpati 30 days ago - 1 comment

#959 - Add support for DICOM WSI by using OpenSlide

Pull Request - State: closed - Opened by benmalef about 1 month ago - 1 comment

#958 - Added logo

Pull Request - State: closed - Opened by sarthakpati about 1 month ago - 1 comment

#957 - [BUG] inpainting metrics are not computed correctly

Issue - State: open - Opened by neuronflow about 2 months ago - 1 comment

#956 - [FEATURE] Calculate the median spacing and size of the training data

Issue - State: open - Opened by benmalef about 2 months ago - 3 comments

#955 - Automatic set strides kernels in dynunet

Pull Request - State: closed - Opened by benmalef about 2 months ago - 2 comments

#954 - [BUG] Classification issue if "include_validation_with_hausdorff" is explicitly set to false

Issue - State: closed - Opened by Linardos about 2 months ago - 1 comment

#953 - [BUG] Classification - forced to calculate all metrics

Issue - State: open - Opened by Linardos about 2 months ago - 3 comments

#952 - Added documentation on private model training

Pull Request - State: closed - Opened by scap3yvt 2 months ago - 1 comment

#951 - [FEATURE] Add documentation for DP training

Issue - State: closed - Opened by sarthakpati 2 months ago

#950 - Upload code coverage only from master

Pull Request - State: closed - Opened by scap3yvt 2 months ago - 2 comments

#949 - [FEATURE] Set automatilacy the numbers of parameters (strides and kernels) in dynunet

Issue - State: closed - Opened by benmalef 2 months ago
Labels: enhancement

#948 - Version updated for development

Pull Request - State: closed - Opened by scap3yvt 2 months ago - 3 comments

#947 - Version updated for tagging

Pull Request - State: closed - Opened by scap3yvt 2 months ago - 3 comments

#946 - Added the option to upload coverage to codacy

Pull Request - State: closed - Opened by sarthakpati 2 months ago - 3 comments

#945 - Added functionality related to DP training

Pull Request - State: closed - Opened by scap3yvt 2 months ago - 5 comments

#944 - [FEATURE] Add DP-enabled training

Issue - State: closed - Opened by sarthakpati 2 months ago
Labels: enhancement

#943 - Update requests version

Pull Request - State: closed - Opened by benmalef 2 months ago - 1 comment

#942 - MLCubes CI

Pull Request - State: open - Opened by hasan7n 2 months ago - 2 comments

#941 - Added the ability to perform automated spell checking

Pull Request - State: closed - Opened by szmazurek 2 months ago - 8 comments

#940 - add docker compose file

Pull Request - State: closed - Opened by benmalef 3 months ago - 6 comments

#939 - Added migration guide

Pull Request - State: closed - Opened by scap3yvt 3 months ago - 1 comment

#938 - Added itcr connectivity map

Pull Request - State: closed - Opened by sarthakpati 3 months ago - 2 comments

#937 - [FEATURE] Add documentation related to ITCR connectivity map

Issue - State: closed - Opened by sarthakpati 3 months ago
Labels: documentation

#936 - Added the ademamix optimizer

Pull Request - State: closed - Opened by scap3yvt 3 months ago - 1 comment

#935 - [FEATURE] Add the AdEMAMix optimizer

Issue - State: closed - Opened by sarthakpati 3 months ago
Labels: enhancement

#934 - Fix spurious errors in OpenFL Github Actions workflow

Pull Request - State: closed - Opened by psfoley 3 months ago - 3 comments

#933 - Changed warning message

Pull Request - State: closed - Opened by Linardos 3 months ago - 1 comment

#932 - [FEATURE] Add histology anonymization

Issue - State: open - Opened by sarthakpati 3 months ago - 1 comment
Labels: enhancement, histology

#931 - [FEATURE] Add support to process multi-label annotation histology files

Issue - State: open - Opened by sarthakpati 3 months ago - 1 comment
Labels: enhancement, histology

#930 - [FEATURE] Extend the files supported for ingestion

Issue - State: open - Opened by sarthakpati 3 months ago - 1 comment
Labels: enhancement

#929 - [FEATURE] Add a "debug mode" to help detailed analysis

Issue - State: open - Opened by sarthakpati 3 months ago - 1 comment

#927 - Updated docs for clarity

Pull Request - State: closed - Opened by Linardos 3 months ago - 1 comment

#926 - [QUESTION] gandlf: command not found

Issue - State: closed - Opened by ujjwalbaid0408 3 months ago - 1 comment

#925 - [FEATURE] Change "Label" to "SegmentationMask" for clarity

Issue - State: open - Opened by Linardos 3 months ago - 2 comments

#924 - [BUG] Classification/regression does not seem to work when `patch_size` is smaller than image size

Issue - State: closed - Opened by sarthakpati 3 months ago - 5 comments
Labels: bug, no-issue-activity

#923 - Assert messages to flush to the log file

Pull Request - State: closed - Opened by benmalef 3 months ago - 13 comments

#922 - Fixed bug in inference

Pull Request - State: closed - Opened by vahluw 4 months ago - 2 comments

#921 - Standardized dependency installation for GitHub actions

Pull Request - State: closed - Opened by scap3yvt 4 months ago - 3 comments

#920 - [FEATURE] Standardize dependency installation for GitHub actions

Issue - State: closed - Opened by sarthakpati 4 months ago - 1 comment
Labels: dependencies

#919 - Torch version updated

Pull Request - State: closed - Opened by scap3yvt 4 months ago - 1 comment

#918 - Add assert messages to flush to the log file

Pull Request - State: closed - Opened by benmalef 4 months ago - 1 comment

#917 - Update sample configuration for classification

Pull Request - State: closed - Opened by scap3yvt 4 months ago - 2 comments

#916 - Add Huggingface Integration

Pull Request - State: closed - Opened by pranayasinghcsmpl 4 months ago - 8 comments

#915 - Updated GaNDLF documentation for clarity

Pull Request - State: closed - Opened by Linardos 4 months ago - 2 comments

#914 - Fix binary auroc error

Pull Request - State: closed - Opened by VukW 4 months ago - 1 comment

#913 - [FEATURE] How to ensure that `assert` messages are logged?

Issue - State: closed - Opened by sarthakpati 4 months ago - 4 comments
Labels: enhancement

#912 - Add log file parameter to cli commands

Pull Request - State: closed - Opened by benmalef 4 months ago - 1 comment

#911 - Ensure all build commands are in single step

Pull Request - State: closed - Opened by scap3yvt 4 months ago - 1 comment

#910 - Updated version check for nightly builds

Pull Request - State: closed - Opened by sarthakpati 4 months ago - 2 comments

#909 - Update preprocess.py

Pull Request - State: closed - Opened by szmazurek 4 months ago - 1 comment

#908 - Adding proper parameter usage in the class constructor

Pull Request - State: closed - Opened by szmazurek 4 months ago - 1 comment

#907 - Rescale transform does not properly use input parameters

Issue - State: closed - Opened by szmazurek 4 months ago - 3 comments
Labels: bug

#906 - Add logging to cli commands

Pull Request - State: closed - Opened by benmalef 4 months ago - 3 comments

#905 - Add Torch profiling

Pull Request - State: closed - Opened by pranayasinghcsmpl 4 months ago - 6 comments

#904 - Updated version for release

Pull Request - State: closed - Opened by sarthakpati 4 months ago - 2 comments

#903 - Sync

Pull Request - State: closed - Opened by sarthakpati 4 months ago - 1 comment

#902 - [FEATURE] CD for MLCubes

Issue - State: open - Opened by sarthakpati 5 months ago - 4 comments
Labels: enhancement

#901 - [BUG] MLCubes are always the same version

Issue - State: open - Opened by sarthakpati 5 months ago - 4 comments
Labels: bug

#900 - Metrics library updated to support comma separate inputs

Pull Request - State: closed - Opened by scap3yvt 5 months ago - 5 comments

#899 - added huggingface cli documentation

Pull Request - State: closed - Opened by pranayasinghcsmpl 5 months ago - 1 comment

#898 - Fixed pip version for CI tests

Pull Request - State: closed - Opened by sarthakpati 5 months ago - 1 comment

#897 - Corrected forward operations order

Pull Request - State: closed - Opened by hongbozheng 5 months ago - 13 comments

#896 - Added output path for optimize model

Pull Request - State: closed - Opened by scap3yvt 5 months ago - 3 comments

#895 - [FEATURE] Add the ability to save optimized models in different location

Issue - State: closed - Opened by sarthakpati 5 months ago - 1 comment
Labels: enhancement

#894 - [BUG] SimpleITK version 2.3.0 causes errors

Issue - State: closed - Opened by Linardos 5 months ago - 3 comments

#893 - Add logging final version

Pull Request - State: closed - Opened by benmalef 5 months ago - 9 comments

#892 - Added huggingface integration

Pull Request - State: closed - Opened by pranayasinghcsmpl 5 months ago - 24 comments

#891 - Add Huggingface Hub Cli Tests

Pull Request - State: closed - Opened by pranayasinghcsmpl 5 months ago - 1 comment

#890 - Cleaning setup

Pull Request - State: closed - Opened by VukW 5 months ago - 4 comments

#889 - Adding function to get augmentation transforms

Pull Request - State: closed - Opened by szmazurek 5 months ago - 10 comments

#888 - [FEATURE] add function to retrieve augmentations from config

Issue - State: closed - Opened by szmazurek 5 months ago - 1 comment
Labels: enhancement

#887 - Hardcoding pip version for workflows

Pull Request - State: closed - Opened by benmalef 5 months ago - 2 comments

#886 - checking updated deadsnake repo

Pull Request - State: closed - Opened by sarthakpati 5 months ago - 2 comments

#885 - Added metrics for BraTS Path challenge

Pull Request - State: closed - Opened by sarthakpati 5 months ago - 3 comments
Labels: enhancement

#884 - [FEATURE] Update PyTorch dependency

Issue - State: closed - Opened by sarthakpati 5 months ago - 9 comments
Labels: dependencies

#883 - [BUG] dice_per_label metric fails

Issue - State: closed - Opened by VukW 6 months ago - 1 comment

#882 - Minor typos removed

Pull Request - State: closed - Opened by scap3yvt 6 months ago - 1 comment

#881 - Add logging - DEPRECATED

Pull Request - State: closed - Opened by benmalef 6 months ago - 13 comments

#880 - Added huggingface integration - DEPRECATED

Pull Request - State: closed - Opened by pranayasinghcsmpl 6 months ago - 7 comments

#879 - HuggingFace integration

Pull Request - State: closed - Opened by pranayasinghcsmpl 6 months ago - 1 comment

#878 - Make sure Hugging Face downloads work, better discoverability

Pull Request - State: closed - Opened by NielsRogge 6 months ago - 2 comments

#877 - Huggingface Hub Integration

Pull Request - State: closed - Opened by pranayasinghcsmpl 6 months ago - 2 comments

#876 - Update black action with specific version

Pull Request - State: closed - Opened by sarthakpati 6 months ago - 1 comment

#875 - [FEATURE] Add Docker Compose

Issue - State: closed - Opened by benmalef 6 months ago - 5 comments
Labels: enhancement, no-issue-activity

GitHub / mlcommons/GaNDLF issues and pull requests