Ecosyste.ms: Issues

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GitHub / microsoft/BioGPT issues and pull requests

#129 - Model Checkpoints Links Broken

Issue - State: open - Opened by chrisagrams 18 days ago

#128 - Get open Source

Issue - State: open - Opened by ahm3delsayed about 1 month ago - 1 comment

#126 - Bump torch from 1.12.0 to 2.2.0

Pull Request - State: open - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#115 - Cannot download pre trained model

Issue - State: open - Opened by benag over 1 year ago - 6 comments

#109 - Drugbank entity replacement

Issue - State: open - Opened by lir0ni over 1 year ago

#109 - Drugbank entity replacement

Issue - State: open - Opened by lir0ni over 1 year ago

#108 - can't download the checkpoints now

Issue - State: closed - Opened by lewislovelock over 1 year ago

#108 - can't download the checkpoints now

Issue - State: closed - Opened by lewislovelock over 1 year ago

#106 - Not able to access the pretrained models via the links.

Issue - State: closed - Opened by dingusagar over 1 year ago - 5 comments

#106 - Not able to access the pretrained models via the links.

Issue - State: closed - Opened by dingusagar over 1 year ago - 4 comments

#105 - Token classification is not working

Issue - State: open - Opened by TekeshwarHirwani over 1 year ago - 2 comments

#105 - Token classification is not working

Issue - State: open - Opened by TekeshwarHirwani over 1 year ago - 2 comments

#104 - Can't download models

Issue - State: closed - Opened by mahmouds-cerebras over 1 year ago - 7 comments

#104 - Can't download models

Issue - State: closed - Opened by mahmouds-cerebras over 1 year ago - 7 comments

#103 - PubMedQA Finetuning

Issue - State: open - Opened by mahmouds-cerebras over 1 year ago - 1 comment

#103 - PubMedQA Finetuning

Issue - State: open - Opened by mahmouds-cerebras over 1 year ago - 1 comment

#102 - Java code

Issue - State: open - Opened by tanishdewase over 1 year ago - 1 comment

#102 - Java code

Issue - State: open - Opened by tanishdewase over 1 year ago - 1 comment

#101 - Valid set and test set of HoC task

Issue - State: open - Opened by Gio-2020 almost 2 years ago

#101 - Valid set and test set of HoC task

Issue - State: open - Opened by Gio-2020 almost 2 years ago

#100 - BioGPT and NVIDIA Tesla K80

Issue - State: open - Opened by dorijan almost 2 years ago

#100 - BioGPT and NVIDIA Tesla K80

Issue - State: open - Opened by dorijan almost 2 years ago

#99 - Oi

Issue - State: open - Opened by Naviomacaco almost 2 years ago

#99 - Oi

Issue - State: open - Opened by Naviomacaco almost 2 years ago

#98 - How to run model and finetune it.

Issue - State: open - Opened by nageshpindi almost 2 years ago - 1 comment

#98 - How to run model and finetune it.

Issue - State: open - Opened by nageshpindi almost 2 years ago - 1 comment

#97 - Question Answering task

Issue - State: open - Opened by rajkumar-surana almost 2 years ago

#97 - Question Answering task

Issue - State: open - Opened by rajkumar-surana almost 2 years ago

#96 - How to get last layer embedding

Issue - State: open - Opened by rajkumar-surana almost 2 years ago

#96 - How to get last layer embedding

Issue - State: open - Opened by rajkumar-surana almost 2 years ago

#95 - Deploy to GCP using Pulumi

Pull Request - State: open - Opened by calufa almost 2 years ago - 2 comments

#95 - Deploy to GCP using Pulumi

Pull Request - State: open - Opened by calufa almost 2 years ago - 2 comments

#94 - Can we have train.sh file for the PubMedQA Model?

Issue - State: open - Opened by dhargopala almost 2 years ago - 1 comment

#94 - Can we have train.sh file for the PubMedQA Model?

Issue - State: open - Opened by dhargopala almost 2 years ago - 1 comment

#93 - [BioGPT-Large-QA] run inference.sh error

Issue - State: open - Opened by ZON-ZONG-MIN almost 2 years ago - 1 comment

#93 - [BioGPT-Large-QA] run inference.sh error

Issue - State: open - Opened by ZON-ZONG-MIN almost 2 years ago - 1 comment

#91 - Question Answering on PubMedQA in Reasoning Required Setting

Issue - State: closed - Opened by ZON-ZONG-MIN almost 2 years ago - 2 comments

#91 - Question Answering on PubMedQA in Reasoning Required Setting

Issue - State: closed - Opened by ZON-ZONG-MIN almost 2 years ago - 2 comments

#90 - 关系抽取DDI、DTI任务复现结果低于论文写的指标十多个点

Issue - State: open - Opened by Yun-Peng-Wang almost 2 years ago - 2 comments

#90 - 关系抽取DDI、DTI任务复现结果低于论文写的指标十多个点

Issue - State: open - Opened by Yun-Peng-Wang almost 2 years ago - 2 comments

#89 - Text getting split into multiple entries

Issue - State: open - Opened by atulkakrana almost 2 years ago

#89 - Text getting split into multiple entries

Issue - State: open - Opened by atulkakrana almost 2 years ago

#87 - Where does the relis-bin folder come from?

Issue - State: open - Opened by David-Degnan almost 2 years ago - 1 comment

#87 - Where does the relis-bin folder come from?

Issue - State: open - Opened by David-Degnan almost 2 years ago - 1 comment

#86 - PubMedQA Prompt format.

Issue - State: open - Opened by badger-lord almost 2 years ago - 12 comments

#86 - PubMedQA Prompt format.

Issue - State: open - Opened by badger-lord almost 2 years ago - 13 comments

#85 - Size Mismatch Error using GPT large

Issue - State: open - Opened by shashank140195 almost 2 years ago - 2 comments

#85 - Size Mismatch Error using GPT large

Issue - State: open - Opened by shashank140195 almost 2 years ago - 2 comments

#84 - Reproducibility issue

Issue - State: open - Opened by yuhangjiang22 almost 2 years ago

#84 - Reproducibility issue

Issue - State: open - Opened by yuhangjiang22 almost 2 years ago

#83 - Could make Gradio join in?

Issue - State: open - Opened by foce123 almost 2 years ago - 1 comment

#82 - error trying to retrain the model

Issue - State: open - Opened by raghav20 almost 2 years ago

#82 - error trying to retrain the model

Issue - State: open - Opened by raghav20 almost 2 years ago

#81 - I get an "Killed" error on trying to load the checpoints

Issue - State: open - Opened by bdutta19 almost 2 years ago - 1 comment

#81 - I get an "Killed" error on trying to load the checpoints

Issue - State: open - Opened by bdutta19 almost 2 years ago - 1 comment

#79 - Medical

Issue - State: open - Opened by 8790fq0bndoew almost 2 years ago

#79 - Medical

Issue - State: open - Opened by 8790fq0bndoew almost 2 years ago

#78 - Why did you decided to use GPT instead of BERT for extractive Q/A?

Issue - State: open - Opened by timothylimyl almost 2 years ago - 1 comment

#78 - Why did you decided to use GPT instead of BERT for extractive Q/A?

Issue - State: open - Opened by timothylimyl almost 2 years ago - 1 comment

#76 - dry run

Pull Request - State: closed - Opened by HyeongSubKim almost 2 years ago - 2 comments

#76 - dry run

Pull Request - State: closed - Opened by HyeongSubKim almost 2 years ago - 2 comments

#75 - Unable to convert BioGpt slow tokenizer to fast: token out of vocabulary

Issue - State: open - Opened by seantaud almost 2 years ago - 2 comments

#75 - Unable to convert BioGpt slow tokenizer to fast: token out of vocabulary

Issue - State: open - Opened by seantaud almost 2 years ago - 2 comments

#72 - Error when executig

Issue - State: open - Opened by Dontmindmes almost 2 years ago - 5 comments

#72 - Error when executig

Issue - State: open - Opened by Dontmindmes almost 2 years ago - 5 comments

#71 - Traceback (most recent call last):

Issue - State: open - Opened by Dontmindmes almost 2 years ago - 5 comments

#71 - Traceback (most recent call last):

Issue - State: open - Opened by Dontmindmes almost 2 years ago - 5 comments

#70 - Azurew ML

Issue - State: open - Opened by kirankumarduddu almost 2 years ago

#70 - Azurew ML

Issue - State: open - Opened by kirankumarduddu almost 2 years ago

#69 - Download Error

Issue - State: open - Opened by DrOgeed almost 2 years ago

#69 - Download Error

Issue - State: open - Opened by DrOgeed almost 2 years ago

#67 - Missing hardware requirements per model?

Issue - State: open - Opened by DMLON almost 2 years ago

#67 - Missing hardware requirements per model?

Issue - State: open - Opened by DMLON almost 2 years ago

#66 - Add app routes

Pull Request - State: closed - Opened by ggokturkk almost 2 years ago

#66 - Add app routes

Pull Request - State: closed - Opened by ggokturkk almost 2 years ago

#65 - "data" is not found after executing the code on Github

Issue - State: open - Opened by thiptanawatp about 2 years ago - 4 comments

#65 - "data" is not found after executing the code on Github

Issue - State: open - Opened by thiptanawatp about 2 years ago - 4 comments

#64 - README example fails: 'NoneType' object has no attribute 'tokenizer'

Issue - State: open - Opened by ayushnoori about 2 years ago - 1 comment

#64 - README example fails: 'NoneType' object has no attribute 'tokenizer'

Issue - State: open - Opened by ayushnoori about 2 years ago - 1 comment

#63 - checkpoint,download issue

Issue - State: closed - Opened by Crispae about 2 years ago

#63 - checkpoint,download issue

Issue - State: closed - Opened by Crispae about 2 years ago

#62 - Tokenizer encodes special tokens as two element list

Issue - State: open - Opened by nicolemcnally about 2 years ago

#62 - Tokenizer encodes special tokens as two element list

Issue - State: open - Opened by nicolemcnally about 2 years ago

#61 - added installer.sh

Pull Request - State: open - Opened by thisismygitrepo about 2 years ago - 13 comments

#61 - added installer.sh

Pull Request - State: open - Opened by thisismygitrepo about 2 years ago - 13 comments

#60 - BioGPT Large pre-training dataset ?

Issue - State: open - Opened by kamalkraj about 2 years ago - 2 comments

#60 - BioGPT Large pre-training dataset ?

Issue - State: open - Opened by kamalkraj about 2 years ago - 2 comments

#59 - Cannot load the model TransformerLanguageModelPrompt.from_pretrained

Issue - State: open - Opened by yuhangjiang22 about 2 years ago - 6 comments

#59 - Cannot load the model TransformerLanguageModelPrompt.from_pretrained

Issue - State: open - Opened by yuhangjiang22 about 2 years ago - 6 comments

#57 - Update README.md

Pull Request - State: open - Opened by Scofield-Idehen about 2 years ago