microbiomedata/nmdc_documentation issues and pull requests

#81 - Redirect all `reference/metadata` URLs to homepage of schema documentation

Pull Request - State: closed - Opened by eecavanna 21 days ago

#80 - Surgically redirect local URLs to `docs.microbiomedata.org` URLs

Pull Request - State: closed - Opened by eecavanna 21 days ago - 2 comments

#79 - Redirect visitors to corresponding pages on new `docs.microbiomedata.org` site

Issue - State: closed - Opened by eecavanna 21 days ago
Labels: documentation

#78 - Delete obsolete workflow doc and redirect its URL to standalone site

Pull Request - State: closed - Opened by eecavanna about 1 month ago - 3 comments

#77 - Delete obsolete "NMDC Workflow Documentations" page

Issue - State: closed - Opened by eecavanna about 1 month ago
Labels: bug, documentation

#76 - Update data_plan.md

Pull Request - State: open - Opened by emileyfadrosh about 2 months ago

#75 - Update links for data portal documentation

Pull Request - State: closed - Opened by naglepuff about 2 months ago

#74 - Determine whether "NMDC Workflow Documentations" page is obsolete

Issue - State: closed - Opened by eecavanna about 2 months ago - 4 comments
Labels: decision needed

#73 - Remove IDEA page

Pull Request - State: closed - Opened by eecavanna about 2 months ago

#72 - Make changes based upon recent guidance

Issue - State: closed - Opened by eecavanna about 2 months ago

#72 - Make changes based upon recent guidance

Issue - State: closed - Opened by eecavanna about 2 months ago

#71 - Update Data Portal-related documentation

Pull Request - State: closed - Opened by aclum 3 months ago - 2 comments

#70 - `berkeley`: Update API GUI how-to guide related to `/planned_processes` endpoints

Pull Request - State: closed - Opened by brynnz22 5 months ago - 3 comments

#69 - Delete `decisions` directory and add related note to `README.md`

Pull Request - State: closed - Opened by eecavanna 6 months ago

#68 - Delete `decisions` directory (has been obsolete for 6 months)

Issue - State: closed - Opened by eecavanna 6 months ago

#67 - add sandbox sunset adr

Pull Request - State: closed - Opened by mslarae13 6 months ago - 1 comment

#66 - Create documentation for NMDC high bandwidth transfer mechanism milestone

Issue - State: closed - Opened by ssarrafan 6 months ago - 4 comments

#65 - Update `api_gui.md` for Berkeley schema and deploy to documentation website

Issue - State: closed - Opened by aclum 7 months ago - 17 comments

#64 - Merge feature branch into `dev` (so can pull changes into dev site on `readthedocs.org`)

Pull Request - State: closed - Opened by eecavanna 7 months ago

#63 - Capture source path segment and append to destination path

Pull Request - State: open - Opened by eecavanna 7 months ago - 5 comments

#62 - Redirect old schema docs pages to `github.io` site

Pull Request - State: closed - Opened by eecavanna 7 months ago

#61 - Update schema links in howto markdown files

Pull Request - State: closed - Opened by aclum 7 months ago

#60 - Hackathon: Replace obsolete schema documentation with HTTP Redirect to latest docs

Issue - State: open - Opened by eecavanna 7 months ago
Labels: documentation

#59 - Remove metadata md files in favor of redirecting to schema documenation

Issue - State: open - Opened by aclum 8 months ago
Labels: user_research

#58 - Document process of deploying documentation updates

Issue - State: open - Opened by eecavanna 10 months ago - 1 comment
Labels: documentation

#57 - Fix URL behavior and add sidebar link pointing to Globus guide

Pull Request - State: closed - Opened by eecavanna 10 months ago

#56 - Hyperlink appears as plain text on Read The Docs website

Issue - State: closed - Opened by eecavanna 10 months ago
Labels: bug

#55 - Add Basic Globus docs

Pull Request - State: closed - Opened by shreddd 10 months ago - 1 comment

#54 - Salvage unique info from schema docs formerly on main docs website

Issue - State: open - Opened by eecavanna 11 months ago
Labels: documentation, backlog

#53 - Redirect visitors to external schema and workflow documentation

Issue - State: open - Opened by eecavanna 11 months ago
Labels: documentation, backlog

#52 - Simplify deprecated "Decisions" home page

Pull Request - State: closed - Opened by eecavanna 11 months ago

#51 - Simplify deprecated "Decisions" home page

Issue - State: closed - Opened by eecavanna 11 months ago
Labels: documentation

#50 - Remove internal facing documentation in the data portal reference page

Pull Request - State: closed - Opened by shreddd 11 months ago - 1 comment
Labels: documentation

#49 - Use links to standalone schema and workflow docs

Pull Request - State: closed - Opened by eecavanna 11 months ago
Labels: documentation

#48 - Add links to schema and workflow documentation websites

Issue - State: closed - Opened by eecavanna 11 months ago

#47 - Newsletter signup form contains reference to former maintainer

Issue - State: open - Opened by eecavanna 11 months ago - 5 comments
Labels: bug, documentation, backlog

#46 - Dev

Pull Request - State: closed - Opened by yxu-lanl 12 months ago

#45 - Dev

Pull Request - State: closed - Opened by yxu-lanl 12 months ago

#44 - Update nmdc_overview.rst

Pull Request - State: closed - Opened by emileyfadrosh 12 months ago

#43 - Add the API documentation How to guide to the front facing documentation

Issue - State: closed - Opened by brynnz22 about 1 year ago - 2 comments

#42 - Streamlining documentation into one place and deciding on document hosting service

Issue - State: closed - Opened by Michal-Babins about 1 year ago - 1 comment

#41 - document use cases of public graphdb vs fuskei in a docker container

Issue - State: open - Opened by aclum about 1 year ago - 1 comment

#40 - add nmdc-runtime dependency text at top

Pull Request - State: closed - Opened by brynnz22 about 1 year ago

#40 - add nmdc-runtime dependency text at top

Pull Request - State: closed - Opened by brynnz22 about 1 year ago

#39 - Schema element syntax and linking plus spot checks

Pull Request - State: closed - Opened by turbomam about 1 year ago - 1 comment

#38 - Provide an alternative link-oriented notation for schema elements in PR #35

Issue - State: open - Opened by turbomam about 1 year ago

#37 - Create FAIR Implementation Profile (FIP)

Issue - State: open - Opened by PeopleMakeCulture about 1 year ago - 1 comment

#36 - draft ADR for schema refactor

Pull Request - State: closed - Opened by mslarae13 about 1 year ago - 7 comments

#35 - Create ADR for schema refactor

Issue - State: closed - Opened by shreddd about 1 year ago

#34 - Consider pointing `docs.microbiomedata.org` subdomain to documentation homepage

Issue - State: open - Opened by eecavanna over 1 year ago - 1 comment
Labels: documentation, enhancement, decision needed

#33 - fix: Updated the copyright date to 2023

Pull Request - State: closed - Opened by yo-404 over 1 year ago - 1 comment

#32 - Copyright message still says `2022`

Issue - State: closed - Opened by eecavanna over 1 year ago
Labels: documentation, good first issue

#31 - Update and rename adr-template-short.md to 0008-spin-outage-plan

Pull Request - State: closed - Opened by shreddd over 1 year ago - 2 comments

#30 - Create ADR indicating how we handle incoming web requests during outages

Issue - State: closed - Opened by eecavanna over 1 year ago - 2 comments
Labels: documentation, backlog

#29 - Add Get dataset dois from Study example in API GUI docs

Issue - State: closed - Opened by brynnz22 over 1 year ago

#28 - Finalize API Documentation

Issue - State: closed - Opened by brynnz22 over 1 year ago - 1 comment
Labels: documentation

#27 - Api gui howto guide

Pull Request - State: closed - Opened by brynnz22 over 1 year ago - 2 comments

#26 - NMDC API GUI documentation

Issue - State: closed - Opened by ssarrafan over 1 year ago - 4 comments

#25 - GitHub Actions: `check-links` job is failing

Issue - State: open - Opened by eecavanna over 1 year ago - 3 comments
Labels: bug

#24 - ADR: Document decision to provide data migration scripts alongside schema changes

Pull Request - State: closed - Opened by eecavanna over 1 year ago - 1 comment
Labels: documentation

#23 - Document the required and optional stages of validating data against the schema

Issue - State: open - Opened by turbomam over 1 year ago

#22 - Update submission_portal.md

Pull Request - State: closed - Opened by jkelliher-github almost 2 years ago

#21 - Add GSC Package descriptions to our documentation

Issue - State: open - Opened by mslarae13 almost 2 years ago - 1 comment

#20 - Update submit2nmdc.md

Pull Request - State: closed - Opened by jkelliher-github almost 2 years ago - 1 comment

#19 - Documentation Update

Issue - State: open - Opened by mslarae13 almost 2 years ago - 1 comment

#18 - ADR 0006 how to handle legacy identifiers ahead of GSP 2023

Pull Request - State: closed - Opened by aclum about 2 years ago

#17 - ADR 0005 - NMDC Schema Sync

Pull Request - State: closed - Opened by shreddd about 2 years ago

#16 - ADR-0004: Host naming conventions

Pull Request - State: closed - Opened by shreddd about 2 years ago

#15 - ADR-0002: ID Scheme

Pull Request - State: closed - Opened by dwinston about 2 years ago - 4 comments

#14 - Add ADR-0001

Pull Request - State: closed - Opened by pkalita-lbl about 2 years ago - 3 comments

#13 - Add link checking using GitHub Actions

Pull Request - State: closed - Opened by pkalita-lbl over 2 years ago - 1 comment

#12 - Potential documentation topic for metadata: understanding globally unique ID

Issue - State: open - Opened by pvangay over 2 years ago

#11 - Potential docs topic for metadata: guidance or flow diagram for selecting MIxS packages

Issue - State: open - Opened by pvangay over 2 years ago - 2 comments

#10 - `Class: biosample` diagram URL produces `414 URI Too Long` error

Issue - State: open - Opened by pvangay over 2 years ago - 8 comments
Labels: bug

#9 - Link checker for all documentation pages

Issue - State: closed - Opened by pvangay over 2 years ago - 8 comments

#8 - document the documentation management process

Issue - State: open - Opened by turbomam almost 3 years ago

#7 - Develop the first version of the SOP to bring in external data into NMDC.

Issue - State: closed - Opened by hubin-keio almost 3 years ago - 2 comments

#6 - Documentation issue - Submission Portal / DH section readthedocs

Issue - State: closed - Opened by ssarrafan about 3 years ago - 3 comments
Labels: April2022 Release

#5 - Documentation issue - MIxS update

Issue - State: closed - Opened by ssarrafan about 3 years ago - 20 comments
Labels: documentation, backlog

#4 - Documentation issue - schema updates

Issue - State: closed - Opened by ssarrafan about 3 years ago - 5 comments
Labels: April2022 Release

#3 - Documentation issue - diataxis

Issue - State: closed - Opened by ssarrafan about 3 years ago - 6 comments
Labels: April2022 Release

#2 - Draft and get feedback on a plan for NMDC streamlined documentation for April release.

Issue - State: closed - Opened by ssarrafan about 3 years ago - 4 comments

#1 - Format for new Compiled Documentation Read the Docs

Issue - State: closed - Opened by mslarae13 about 3 years ago - 3 comments

GitHub / microbiomedata/nmdc_documentation issues and pull requests