micro-manager/NDTiffStorage issues and pull requests

#146 - Rename test

Pull Request - State: closed - Opened by henrypinkard 8 months ago

#145 - Dummy commit to make sure tests run

Pull Request - State: closed - Opened by henrypinkard 8 months ago

#144 - Add ability to write NDTiffs from python

Pull Request - State: closed - Opened by henrypinkard 8 months ago

#143 - Fix bug that allowed low resolutions on non multi-res datasets

Pull Request - State: closed - Opened by henrypinkard 8 months ago

#142 - add method for reading metadata without reading image

Pull Request - State: closed - Opened by henrypinkard about 1 year ago

#141 - Change signature of MultiResNDTiffAPI.increaseMaxResolution

Issue - State: open - Opened by nicost over 1 year ago - 1 comment

#140 - version bump

Pull Request - State: closed - Opened by nicost over 1 year ago

#139 - Fixes a logic bug in Pyramidal storage

Pull Request - State: closed - Opened by nicost over 1 year ago - 2 comments

#138 - V3.2 breaks reading and writing code, is this so important to break backward compatbility?

Issue - State: closed - Opened by nicost over 1 year ago - 8 comments

#137 - move up cloud based IO

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#136 - Fix problem of wrong shaped array. See issue #119

Pull Request - State: closed - Opened by manuelmaeritz over 1 year ago - 3 comments

#135 - How to remove data in a specific axes of a ndtiff file?

Issue - State: closed - Opened by svikolev over 1 year ago - 2 comments

#134 - fix reading bug arising in MMStudio

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#133 - bump version

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#132 - fix encoding error

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#130 - Update requirements

Issue - State: open - Opened by goanpeca over 1 year ago - 1 comment

#129 - improve shutdown behavior when writing exception happens

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#128 - Propagate exceptions on writing thread to caller

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#127 - remove (probably unneeded) delay

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#126 - fix bug with string valued axes

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#125 - setup.py now uses requirements.txt instead of hard coding

Pull Request - State: closed - Opened by pavanramkumar over 1 year ago - 1 comment

#124 - Adds test for reading data with unordered position labeles

Pull Request - State: closed - Opened by ieivanov over 1 year ago - 8 comments

#123 - removes os.sep from index file path

Pull Request - State: closed - Opened by pavanramkumar over 1 year ago - 2 comments

#122 - Bug report: path separator is appended twice to file path

Issue - State: closed - Opened by pavanramkumar over 1 year ago - 1 comment

#121 - add support for increasing max resolution before data has arrived

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#120 - Modifications to enable O(log N) cost add_axis_index

Pull Request - State: closed - Opened by carlkesselman over 1 year ago - 2 comments

#119 - Dataset.as_array() returns array of wrong size for stitched images

Issue - State: closed - Opened by manuelmaeritz over 1 year ago - 2 comments

#118 - speed up datasets updating in place by not parsing all keys

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#117 - Implement axis sorting on v2 datasets

Pull Request - State: closed - Opened by ieivanov over 1 year ago - 2 comments

#116 - Add pixel types for 9 bit, 13 bit, 15 bit

Issue - State: closed - Opened by henrypinkard over 1 year ago - 1 comment

#115 - fix potential race condition

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#114 - add close and wait to try to fix pm tests

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#113 - bump version to test GPG update

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#112 - bump version

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#111 - move storage listener code to pycromanager and fix related bugs

Pull Request - State: closed - Opened by henrypinkard over 1 year ago

#110 - Opening ndtiff dataset in two different processes

Issue - State: open - Opened by ieivanov almost 2 years ago - 2 comments
Labels: question

#109 - ndtiff Datasets cannot be pickled

Issue - State: open - Opened by ieivanov almost 2 years ago - 3 comments

#108 - refactor read_one_image

Pull Request - State: closed - Opened by ieivanov almost 2 years ago

#107 - Bugfix/dask image dims

Pull Request - State: closed - Opened by ieivanov almost 2 years ago - 1 comment

#106 - Please tag the release commits

Issue - State: open - Opened by bnavigator almost 2 years ago - 3 comments

#105 - Dataset.as_array() flips X and Y dimensions

Issue - State: closed - Opened by ieivanov almost 2 years ago - 5 comments

#104 - remove channel_name from named args and fix col/column confusion

Pull Request - State: closed - Opened by henrypinkard almost 2 years ago

#103 - various small changes that go along with generalization of explore ac…

Pull Request - State: closed - Opened by henrypinkard almost 2 years ago

#102 - Patch/11bit

Pull Request - State: closed - Opened by ieivanov almost 2 years ago - 1 comment

#101 - Don't try to deploy to pypi from forks

Pull Request - State: closed - Opened by ieivanov almost 2 years ago

#100 - Fix ResourceWarning: unclosed file <_io.BufferedReader name=...>

Pull Request - State: closed - Opened by cgohlke almost 2 years ago - 2 comments

#99 - Removed mmap interface, added file_io supporting arbitrary IO functions

Pull Request - State: closed - Opened by zack-insitro almost 2 years ago - 10 comments

#98 - Fix AttributeError: 'int' object has no attribute 'close'

Pull Request - State: closed - Opened by cgohlke almost 2 years ago - 1 comment

#97 - Update GH action

Pull Request - State: closed - Opened by henrypinkard almost 2 years ago