mfranberg/libplinkio issues and pull requests

#47 - Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#46 - plinkio/plinkio.h file not found

Issue - State: closed - Opened by MboiTui 10 months ago - 2 comments

#45 - Add support for Python 3.12 and drop for 3.7.

Pull Request - State: closed - Opened by Kazuki-TAKEDA over 1 year ago

#44 - Configure: error: cannot find python-config for /usr/bin/python3

Issue - State: open - Opened by BridgetCampbell over 1 year ago - 3 comments

#43 - Add pyproject.toml.

Pull Request - State: closed - Opened by Kazuki-TAKEDA almost 2 years ago

#42 - Enable read-only reopening on UNIX-like systems.

Pull Request - State: closed - Opened by Kazuki-TAKEDA almost 2 years ago

#41 - Support for opening PED format files.

Pull Request - State: closed - Opened by Kazuki-TAKEDA almost 2 years ago

#40 - Remove endianness check and rewrite unpack_snps().

Pull Request - State: closed - Opened by Kazuki-TAKEDA about 2 years ago

#39 - Drop the tox tests on MinGW to avoid C runtime imcompatibility.

Pull Request - State: closed - Opened by Kazuki-TAKEDA about 2 years ago

#38 - Add CI/CD test for Python 3.11

Pull Request - State: closed - Opened by Kazuki-TAKEDA about 2 years ago

#37 - Fix .bed file handling bug on Windows

Pull Request - State: closed - Opened by Kazuki-TAKEDA over 2 years ago

#36 - Improve the tox and CI/CD settings to support a wide range of platforms

Pull Request - State: closed - Opened by Kazuki-TAKEDA over 2 years ago - 5 comments

#35 - Fix "python setup.py sdist" bug caused by #34

Pull Request - State: closed - Opened by Kazuki-TAKEDA over 2 years ago - 1 comment

#34 - Add Visual C++ support

Pull Request - State: closed - Opened by Kazuki-TAKEDA over 2 years ago - 4 comments

#33 - Cannot install libplinkio on Windows

Issue - State: open - Opened by Patricklv almost 3 years ago - 6 comments

#32 - Suppress warnings for cmockery

Pull Request - State: open - Opened by mfranberg almost 3 years ago

#31 - How to build

Issue - State: closed - Opened by jspeckman almost 3 years ago - 11 comments

#30 - Add support for extra-chroms (string chromosomes)

Pull Request - State: open - Opened by bunop over 3 years ago

#29 - Add support for extra-chroms (string chromosomes)

Issue - State: open - Opened by bunop almost 4 years ago - 1 comment

#28 - Kazuki takeda master

Pull Request - State: closed - Opened by mfranberg almost 4 years ago

#27 - Fix warnings

Pull Request - State: closed - Opened by mfranberg almost 4 years ago

#26 - Port code over to Windows

Pull Request - State: closed - Opened by Kazuki-TAKEDA almost 4 years ago - 5 comments

#25 - Fix writing plink files under python3

Pull Request - State: closed - Opened by jeremymcrae about 4 years ago - 1 comment

#24 - python wrapper function read_bedbimfam

Issue - State: closed - Opened by shadiakiki1986 over 4 years ago - 2 comments

#23 - Python unit test should test WritablePlinkFile

Issue - State: closed - Opened by brianzhang01 about 5 years ago - 1 comment

#22 - [request] Publish the module to anaconda

Issue - State: closed - Opened by TTTPOB over 5 years ago

#21 - Segmentation fault (core dumped) in Python 3

Issue - State: closed - Opened by mchburch over 5 years ago - 3 comments

#20 - plinkfile import error due to GLIBC.214

Issue - State: closed - Opened by sn-GT over 5 years ago - 1 comment

#19 - Error in opening bim file

Issue - State: closed - Opened by nurfatimaj over 5 years ago - 5 comments

#18 - FAM file parsing: Relation between phenotype and affection

Issue - State: closed - Opened by yakkoroma about 6 years ago - 2 comments

#17 - Error in importing plinkfile

Issue - State: closed - Opened by aritra90 over 6 years ago - 1 comment

#16 - Fam file containing character phenotypes

Issue - State: closed - Opened by choishingwan over 6 years ago - 3 comments

#15 - Can't install plinkio on RHEL

Issue - State: closed - Opened by nurfatimaj over 6 years ago - 4 comments

#14 - Install header files only for shared library

Pull Request - State: closed - Opened by ofrei almost 7 years ago - 3 comments

#13 - Implement api to skip next row while reading bed file

Pull Request - State: closed - Opened by ofrei about 7 years ago - 1 comment

#12 - Get rid of configure and just use cmake for everything

Issue - State: closed - Opened by mfranberg about 7 years ago - 1 comment

#11 - Add options to disable building shared and static libraries

Pull Request - State: closed - Opened by ofrei about 7 years ago - 3 comments

#10 - Instructions for static linkage of libplinkio

Issue - State: closed - Opened by ofrei about 7 years ago - 2 comments

#9 - Installing plinkio on Windows machine

Issue - State: closed - Opened by cullenaroberts over 7 years ago - 5 comments

#8 - Compilation error

Pull Request - State: closed - Opened by YeWenting over 7 years ago - 1 comment

#7 - compiler seems not recognize the variables declared in plinkio.h

Issue - State: closed - Opened by HaohanWang over 7 years ago

#6 - plinkfile.create fails with a bad path

Issue - State: closed - Opened by mfranberg over 9 years ago - 1 comment

#5 - undefined symbol: PyInt_AsLong

Issue - State: closed - Opened by freeseek almost 10 years ago - 2 comments

#4 - WritablePlinkFile segfaults when Samples have ints instead of strings

Issue - State: closed - Opened by Wainberg almost 10 years ago - 3 comments

#3 - Memory leak when writing plink files via the Python interface

Issue - State: closed - Opened by bvilhjal about 10 years ago - 6 comments

#2 - Memory leak?

Issue - State: closed - Opened by hakon-jon about 10 years ago - 10 comments

#1 - Friendly IO error message

Pull Request - State: closed - Opened by hakon-jon over 11 years ago - 2 comments

GitHub / mfranberg/libplinkio issues and pull requests