Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / meyer-lab-cshl/plinkQC issues and pull requests
#54 - Issue with data pruning for ancestry estimation
Issue -
State: open - Opened by safamajeed 8 months ago
#53 - possible issue with high-LD-regions-hg38-GRCh38.bed data
Issue -
State: open - Opened by straubp-vandy 11 months ago
#52 - Negative chromosome X heterozygosities
Issue -
State: open - Opened by fastforward35 11 months ago
- 1 comment
#51 - Negative Chr X heterozygosities
Issue -
State: open - Opened by fastforward35 11 months ago
#50 - Updates for Ancestry Estimation Vignette
Issue -
State: open - Opened by carolinewalter5 almost 2 years ago
#49 - 1000 Genomes phase 3 links have changed
Issue -
State: open - Opened by mxhm over 2 years ago
#48 - Error using the evaluate_check_ancestry function
Issue -
State: open - Opened by boseb over 2 years ago
- 1 comment
#47 - Some questions about ancestry estimation
Issue -
State: open - Opened by jordur over 2 years ago
#46 - Cannot find sample in the prefix merged dataset
Issue -
State: closed - Opened by rskl92 over 2 years ago
- 1 comment
#45 - mkdir flag
Pull Request -
State: closed - Opened by eg-r almost 3 years ago
#44 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 3 years ago
#43 - check_snp_missingness error
Issue -
State: closed - Opened by nickorr78 over 3 years ago
- 3 comments
#42 - check_relatedness ignores genomebuild
Issue -
State: closed - Opened by fechva over 3 years ago
- 2 comments
#41 - plinkQC a single sample
Issue -
State: closed - Opened by jielab over 3 years ago
- 3 comments
#40 - Update dplyr verb syntax avoiding global variable issues
Pull Request -
State: closed - Opened by HannahVMeyer over 3 years ago
#39 - Update github to 0.3.3
Pull Request -
State: closed - Opened by HannahVMeyer over 3 years ago
#38 - Ancestry Check outlier mapping
Issue -
State: closed - Opened by pwuUCL over 3 years ago
- 5 comments
Labels: enhancement
#37 - Error in evaluate_ancestry_check samples that cannot be found
Issue -
State: closed - Opened by brkicd over 3 years ago
- 6 comments
#36 - Zooming in on PCA graph?
Issue -
State: closed - Opened by MichaelCummingsBCH almost 4 years ago
#35 - plot was not created
Issue -
State: closed - Opened by montenegrina almost 4 years ago
- 2 comments
#34 - Build version
Issue -
State: closed - Opened by montenegrina about 4 years ago
- 2 comments
#33 - markerQC
Issue -
State: closed - Opened by umasaxena about 4 years ago
- 2 comments
#32 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 4 years ago
#31 - name.fail-IBD.IDs not found
Issue -
State: closed - Opened by wiedenhoeft about 4 years ago
- 6 comments
#30 - check_sex fails if no gender mismatch is found in the data
Issue -
State: closed - Opened by pasiunaite about 4 years ago
- 2 comments
#29 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 4 years ago
#28 - Unknown error using the evaluate_check_ancestry function
Issue -
State: closed - Opened by MichaelCummingsBCH over 4 years ago
- 33 comments
#27 - X chromosome QC
Issue -
State: closed - Opened by rskl92 over 4 years ago
- 10 comments
Labels: question
#26 - ERROR WHILE RUNNING PLINKQC IN RSTUDIO ON WINDOWS
Issue -
State: closed - Opened by hkiran22 over 4 years ago
- 4 comments
#25 - Shifted PCA plots with respect to reference sample
Issue -
State: closed - Opened by HannahVMeyer over 4 years ago
- 37 comments
#24 - A<->T and C<->G lead to shift population shifts in ancestry qc
Issue -
State: closed - Opened by HannahVMeyer over 4 years ago
- 2 comments
#23 - Relatedness checks
Issue -
State: closed - Opened by rskl92 over 4 years ago
- 15 comments
#22 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer over 4 years ago
- 1 comment
#21 - Log issue occurs when running the function perMarkerQC and overviewPerMarkerQC
Issue -
State: closed - Opened by fanwayne over 4 years ago
- 5 comments
Labels: enhancement, help wanted
#20 - Alleles swapped in cleanData
Issue -
State: closed - Opened by evagradovich almost 5 years ago
- 2 comments
#19 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer almost 5 years ago
#18 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 5 years ago
#17 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 5 years ago
#16 - Error when running overviewPerIndividualQC function
Issue -
State: closed - Opened by dietmarfdz about 5 years ago
- 4 comments
#15 - Exit error in relatedness check
Issue -
State: closed - Opened by evagradovich about 5 years ago
- 2 comments
#14 - evaluate_check_ancestry fails with numeric IDs
Issue -
State: closed - Opened by Rodin67 about 5 years ago
- 2 comments
#13 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 5 years ago
#12 - Dev
Pull Request -
State: closed - Opened by HannahVMeyer about 5 years ago
#11 - Possible Bug relatednessFilter
Issue -
State: closed - Opened by GabrieleNocchi about 5 years ago
- 24 comments
#10 - Error when following Genomes1000.Rmd commands
Issue -
State: closed - Opened by dpcc2 about 5 years ago
- 2 comments
Labels: help wanted
#9 - macTh and mafTh in perMarkerQC
Issue -
State: closed - Opened by blueskypie about 5 years ago
- 3 comments
Labels: invalid
#8 - error from perMarkerQC
Issue -
State: closed - Opened by blueskypie about 5 years ago
- 4 comments
#7 - error from overviewPerIndividualQC
Issue -
State: closed - Opened by blueskypie about 5 years ago
- 1 comment
#6 - error from overviewPerIndividualQC
Issue -
State: closed - Opened by blueskypie over 5 years ago
- 2 comments
Labels: bug
#5 - perIndividualQC
Issue -
State: closed - Opened by blueskypie over 5 years ago
- 1 comment
Labels: enhancement
#4 - perIndividual/MarkerQC function starts device X11cairo even when called with interactive=FALSE
Issue -
State: closed - Opened by marcora over 5 years ago
- 2 comments
#3 - error running relateness check
Issue -
State: closed - Opened by blueskypie over 5 years ago
- 11 comments
#2 - Removing failed IDs
Issue -
State: closed - Opened by eg-r over 5 years ago
- 1 comment
#1 - Wrong system call for windows
Issue -
State: closed - Opened by HannahVMeyer almost 6 years ago
- 1 comment
Labels: bug