Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / metapub/metapub issues and pull requests

#67 - Error parsing response object from NCBI

Issue - State: closed - Opened by FurkanBeyazit about 2 months ago - 3 comments

#65 - Create issue templates, finally

Pull Request - State: closed - Opened by nthmost 4 months ago

#62 - Investigate better usage of EuropePMC api

Issue - State: open - Opened by nthmost 5 months ago

#61 - DxDOI engine speedup. Cache results from 402 and 403.

Pull Request - State: closed - Opened by nthmost 5 months ago

#60 - obscure FindIt logic bugs found for some PMIDs

Issue - State: open - Opened by nthmost 5 months ago - 2 comments
Labels: bug, good first issue

#59 - PubMedFetcher cache going into "default" directory relative to runtime directory

Issue - State: closed - Opened by nthmost 5 months ago - 1 comment
Labels: bug

#57 - Find it.supported journals

Pull Request - State: closed - Opened by nthmost 5 months ago - 1 comment

#56 - 0.5.9 -- PubMedArticle.keywords support (contribution from Sartoriius)

Pull Request - State: closed - Opened by nthmost 5 months ago - 1 comment

#55 - Continuation token?

Issue - State: open - Opened by RinusVerdonschot 5 months ago - 6 comments

#54 - FindIt should produce a list of supported journals

Issue - State: closed - Opened by nthmost 5 months ago

#53 - Broken embargo handling

Pull Request - State: closed - Opened by nthmost 5 months ago

#52 - How to get article publication date?

Issue - State: open - Opened by richardehughes 5 months ago - 4 comments

#51 - add and import lxml_html_clean

Pull Request - State: closed - Opened by MarcoAigner 6 months ago - 1 comment

#50 - NOFORMAT returned for journal Semin Thromb Hemost

Issue - State: open - Opened by winfrednyoroka 7 months ago - 2 comments

#48 - Metapub FindIt Issue: Broken Embargo Handling

Issue - State: closed - Opened by hassaanQadir 8 months ago - 3 comments

#47 - article returned from pubmed is cut

Issue - State: open - Opened by omrison 9 months ago - 1 comment

#46 - PubMedAuthor input value

Issue - State: open - Opened by riley-seoyoon 10 months ago - 1 comment

#45 - Fix for truncated abstract xml text

Pull Request - State: closed - Opened by mberth over 1 year ago - 1 comment

#44 - Fix Pubmed caching

Pull Request - State: closed - Opened by mberth over 1 year ago

#43 - SQLite cache is not used for PubMedFetcher

Issue - State: closed - Opened by mberth over 1 year ago

#42 - JSONDecodeError on Windows 10

Issue - State: open - Opened by nicthib over 1 year ago - 1 comment

#41 - doi2pmid gives wrong PMID

Issue - State: open - Opened by njzjz over 1 year ago - 1 comment

#40 - How to get the citations count for each article

Issue - State: closed - Opened by MathewKevin about 2 years ago - 5 comments

#38 - install_requires

Issue - State: closed - Opened by njzjz almost 3 years ago - 2 comments

#37 - pmid2doi of 1000 pmids takes infinite time

Issue - State: closed - Opened by charlesxu90 about 3 years ago - 1 comment

#35 - Abstracts cut off at various characters or formatting.

Issue - State: closed - Opened by rayking99 over 3 years ago - 1 comment

#34 - added keyword functionality to PubMedArticle

Pull Request - State: closed - Opened by sartoriius over 3 years ago - 1 comment
Labels: enhancement, PubMedArticle

#33 - convert from metapub clash with convert from ImageMagick

Issue - State: closed - Opened by glucksfall over 3 years ago - 1 comment

#32 - Invalid ID "6761231" (rejected by Eutils); please check the number and try again.

Issue - State: open - Opened by monk1337 about 4 years ago - 7 comments
Labels: question

#31 - How to extract full article instead of just abstract?

Issue - State: closed - Opened by monk1337 about 4 years ago - 1 comment
Labels: question

#30 - there seems to have been no way to actually use the cache with MedGenFetcher?

Pull Request - State: closed - Opened by cariaso about 4 years ago - 1 comment

#29 - PubMedArticle.citation_html no longer adding most HTML tags

Issue - State: open - Opened by afrubin over 4 years ago - 1 comment
Labels: help wanted, good first issue

#28 - Changed query_title to query_bibliographic

Pull Request - State: closed - Opened by DocMT over 4 years ago - 1 comment

#27 - Getting keywords or tags of an article

Issue - State: open - Opened by rouzki over 4 years ago - 1 comment
Labels: enhancement, help wanted, good first issue

#26 - Testing integration with Monday

Issue - State: closed - Opened by nthmost over 4 years ago
Labels: documentation, question

#25 - Access Denied when using FindIT

Issue - State: closed - Opened by phucty over 4 years ago - 1 comment

#24 - Fixes abstract parsing with HTML

Pull Request - State: closed - Opened by jvansan over 4 years ago - 1 comment

#23 - Article from DOI problems

Issue - State: open - Opened by jvansan over 4 years ago - 2 comments
Labels: help wanted, good first issue

#22 - Abstracts of articles truncate when there is an HTML tag in there.

Issue - State: closed - Opened by narayanacharya6 almost 5 years ago - 2 comments
Labels: bug, good first issue, PubMedArticle

#21 - Implement CitedIn

Issue - State: open - Opened by nthmost almost 5 years ago
Labels: enhancement, critical path

#20 - More robust medgen concept test

Pull Request - State: closed - Opened by nthmost almost 5 years ago

#19 - Allows for queries with multiple quoted terms

Pull Request - State: closed - Opened by jvansan almost 5 years ago

#18 - Update contributors.txt

Pull Request - State: closed - Opened by jvansan almost 5 years ago

#17 - Fixes XML parsing for titles with HTML

Pull Request - State: closed - Opened by jvansan almost 5 years ago - 1 comment

#16 - PubMedFetcher: Article titles are truncated when PubMed article title include italics

Issue - State: closed - Opened by jramshur about 5 years ago - 4 comments
Labels: bug, good first issue, critical path

#15 - Make a Logo for Metapub

Issue - State: closed - Opened by nthmost about 5 years ago - 13 comments
Labels: help wanted

#14 - Write a Medium article about Metapub.

Issue - State: open - Opened by nthmost about 5 years ago - 4 comments
Labels: documentation, help wanted

#13 - Create a CrossCompute Algorithm that uses Metapub

Issue - State: open - Opened by nthmost about 5 years ago
Labels: help wanted, nice to have

#12 - Collect Metapub's academic citations and project usages

Issue - State: open - Opened by nthmost about 5 years ago - 16 comments

#11 - added bibtex citation property to PubMedArticle

Pull Request - State: open - Opened by b-schd about 5 years ago - 1 comment
Labels: enhancement

#10 - added bibtex citation property to PubMedArticle

Pull Request - State: closed - Opened by b-schd about 5 years ago

#9 - Complete metapub's move to GitHub by leaving breadcrumbs

Issue - State: closed - Opened by nthmost about 5 years ago - 2 comments
Labels: documentation

#8 - Provide citation formatting in BibTex

Issue - State: open - Opened by nthmost about 5 years ago - 4 comments
Labels: enhancement, good first issue, spec needed, critical path

#7 - Improve logging and documentation around logging

Issue - State: open - Opened by nthmost about 5 years ago
Labels: documentation, enhancement, spec needed

#6 - article year is not always a year.

Issue - State: open - Opened by nthmost about 5 years ago
Labels: bug, good first issue

#5 - Search query with quotation marks return zero results.

Issue - State: open - Opened by nthmost about 5 years ago - 2 comments
Labels: bug, good first issue

#4 - Create better documentation around PubMedArticle

Issue - State: open - Opened by nthmost about 5 years ago
Labels: documentation

#3 - collect "VernacularTitle" when PubMedArticle.title is "[Not Available]"

Issue - State: open - Opened by nthmost about 5 years ago
Labels: enhancement, good first issue

#2 - Access and extract the fulltext of pubmed books

Issue - State: open - Opened by nthmost about 5 years ago - 1 comment
Labels: enhancement, good first issue, nice to have

#1 - Bring issues in from Bitbucket

Issue - State: closed - Opened by nthmost about 5 years ago - 1 comment
Labels: documentation