Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / mdshw5/simplesam issues and pull requests
#26 - Add description of pileup.py to README
Pull Request -
State: closed - Opened by mdshw5 over 2 years ago
#25 - Add pileup script and move tests to Github Actions
Pull Request -
State: closed - Opened by mdshw5 over 2 years ago
#24 - Merge pull request #22 from mdshw5/develop
Pull Request -
State: closed - Opened by mdshw5 over 2 years ago
#23 - x.tags errors when test a bam
Issue -
State: open - Opened by Frank1219 over 3 years ago
- 2 comments
#22 - Add support for appending to existing SAM files (#21).
Pull Request -
State: closed - Opened by mdshw5 over 3 years ago
Labels: enhancement
#21 - Rewrite headers when write mode is append?
Issue -
State: closed - Opened by xizhihui over 3 years ago
- 9 comments
#20 - StopIteration causes and error in Python 3.7
Issue -
State: closed - Opened by tomas-fer over 3 years ago
- 4 comments
#19 - Sam.coords returns a range
Issue -
State: closed - Opened by SynedraAcus over 5 years ago
- 1 comment
#18 - Exception parsing SAM (but not BAM) files: ValueError: I/O operation on closed file.
Issue -
State: closed - Opened by bede over 5 years ago
- 5 comments
Labels: wontfix
#17 - A workaround for direct bam compression
Pull Request -
State: closed - Opened by romagnolid over 6 years ago
- 1 comment
#16 - x.tags available only after get or set a tag
Issue -
State: closed - Opened by romagnolid over 6 years ago
- 4 comments
Labels: enhancement
#15 - Create LICENSE
Pull Request -
State: closed - Opened by mdshw5 about 7 years ago
#14 - Create CODE_OF_CONDUCT.md
Pull Request -
State: closed - Opened by mdshw5 about 7 years ago
#13 - Slight cleanup
Pull Request -
State: closed - Opened by niemasd about 7 years ago
- 1 comment
#12 - AttributeError: 'Writer' object has no attribute 'close'
Issue -
State: closed - Opened by junjieahaha over 7 years ago
- 1 comment
#11 - 0.0.5
Issue -
State: closed - Opened by Cediddi almost 8 years ago
- 1 comment
#11 - 0.0.5
Issue -
State: closed - Opened by Cediddi almost 8 years ago
- 1 comment
#10 - Pulling in changes from @genomize
Pull Request -
State: closed - Opened by mdshw5 about 8 years ago
#9 - Efficient de-duplication method
Issue -
State: open - Opened by mdshw5 about 9 years ago
Labels: enhancement
#8 - Raise error when `Reader` is called on an unindexed BAM file
Issue -
State: closed - Opened by mdshw5 about 9 years ago
- 1 comment
Labels: bug
#7 - Allow colon delimited SAM tag data fields
Issue -
State: open - Opened by mdshw5 over 9 years ago
Labels: bug
#6 - Allow tags in the format `XX:A:[~!-]`
Issue -
State: open - Opened by mdshw5 over 9 years ago
Labels: bug
#5 - Handle tags that contain more than two `:`
Issue -
State: open - Opened by mdshw5 over 9 years ago
Labels: enhancement
#4 - Reader.subsample returns a malformed Sam object
Issue -
State: closed - Opened by mdshw5 over 9 years ago
Labels: bug
#3 - Data structure for summarizing alignment coverage
Issue -
State: open - Opened by mdshw5 over 9 years ago
Labels: enhancement
#2 - Package needs more documentation
Issue -
State: open - Opened by mdshw5 over 9 years ago
Labels: enhancement
#1 - Add some tests
Issue -
State: open - Opened by mdshw5 almost 10 years ago
- 1 comment
Labels: enhancement