Ecosyste.ms: Issues

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GitHub / mazzalab/fastqwiper issues and pull requests

#32 - Is there any parameters to increase the retrived data

Issue - State: open - Opened by lilinzhou 3 months ago - 4 comments

#31 - Wipertools

Pull Request - State: closed - Opened by mazzalab 3 months ago

#30 - Improved tests and removed snakemake pipelines

Pull Request - State: closed - Opened by mazzalab 3 months ago - 1 comment

#29 - Missing coverage for other types of output

Issue - State: open - Opened by piplus2 3 months ago - 1 comment
Labels: enhancement

#28 - Updated README.md

Pull Request - State: closed - Opened by josefoviedo 4 months ago
Labels: documentation

#27 - Empty output fixed_wiped_paired_interleaving.fastq.gz

Issue - State: open - Opened by moniquevdor 5 months ago - 7 comments

#26 - 24 fastqwiper reports for parallel workflows

Pull Request - State: closed - Opened by mazzalab 6 months ago

#25 - Fixed fastqwiper report for single threaded execution

Pull Request - State: closed - Opened by mazzalab 6 months ago

#24 - FastqWiper reports for parallel workflows

Issue - State: closed - Opened by mazzalab 6 months ago
Labels: enhancement

#23 - Report for single threaded workflows

Issue - State: closed - Opened by mazzalab 6 months ago
Labels: enhancement

#22 - Issue with fastqwiper: Error -3 while decompressing data

Issue - State: closed - Opened by MaybeTommorow 8 months ago - 2 comments

#21 - fastqiper command not found

Issue - State: closed - Opened by NMikolajewicz 9 months ago - 2 comments

#19 - 18 drop colorama and python versions

Pull Request - State: closed - Opened by mazzalab 9 months ago - 1 comment
Labels: enhancement

#18 - Drop Colorama and Python versions

Issue - State: closed - Opened by mazzalab 9 months ago
Labels: enhancement

#17 - 16 bbmap repairsh guesses the wrong ascii quality encoding offset and fails

Pull Request - State: closed - Opened by mazzalab 9 months ago
Labels: enhancement

#16 - BBmap repair.sh guesses the wrong ASCII quality encoding offset and fails

Issue - State: closed - Opened by cdupai-bbi 10 months ago - 1 comment
Labels: enhancement

#15 - Missing input files for rule fix_gzrt error

Issue - State: closed - Opened by osmanmerdan 12 months ago - 2 comments

#14 - Incremented fastq size after fastqwiper

Issue - State: closed - Opened by mlarjim 12 months ago - 2 comments

#13 - Fastqwiper generates problematic names for paired reads

Issue - State: closed - Opened by search42 about 1 year ago - 7 comments

#12 - zlib.error: Error -3 while decompressing data: invalid block type

Issue - State: closed - Opened by sjfleck about 1 year ago - 13 comments

#11 - smk files for paired end reads

Issue - State: closed - Opened by carolynzy over 1 year ago - 1 comment

#10 - ValueError: min() arg is an empty sequence

Issue - State: closed - Opened by Jinntty over 1 year ago - 1 comment
Labels: bug

#9 - 8 - singularity compliance

Pull Request - State: closed - Opened by mazzalab over 1 year ago
Labels: enhancement

#8 - Error with Docker file

Issue - State: closed - Opened by kimal999 over 1 year ago - 2 comments
Labels: enhancement

#7 - Installation error

Issue - State: closed - Opened by avinashkarkada over 1 year ago - 5 comments

#6 - How long usually it takes?

Issue - State: closed - Opened by hansong798 over 1 year ago - 2 comments

#5 - unable to install mamba using conda as you suggested

Issue - State: closed - Opened by shanmugavadivelps over 1 year ago - 15 comments

#4 - "Aborted!" error message

Issue - State: closed - Opened by jsalt over 1 year ago - 7 comments

#3 - Empty output expected?

Issue - State: closed - Opened by bcantarel about 2 years ago - 2 comments

#2 - PKG_VERSION

Issue - State: closed - Opened by erikbgithub over 2 years ago - 1 comment

#1 - Zero Division

Issue - State: closed - Opened by erikbgithub over 2 years ago - 1 comment