Ecosyste.ms: Issues

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GitHub / mathewchamberlain/SignacX issues and pull requests

#27 - Downloading raw data used for SignacX

Issue - State: open - Opened by ceesu 12 months ago

#26 - Prepare for upcoming Seurat v5 release

Issue - State: open - Opened by saketkc over 1 year ago

#25 - Signac or SignacFast hang

Issue - State: open - Opened by gianfilippo over 1 year ago - 1 comment

#24 - Can SignacX also automatically annotate platelets too?

Issue - State: open - Opened by levinhein almost 2 years ago

#23 - How to apply SignacX to mouse dataset?

Issue - State: open - Opened by shengqh almost 2 years ago

#21 - Benchmarking SignacX vs SingleR in PBMC?

Issue - State: open - Opened by levinhein almost 2 years ago

#20 - Update helper_functions.R

Pull Request - State: closed - Opened by akurlovs almost 2 years ago

#19 - Seurat v4.3.0 compatibility issue

Issue - State: open - Opened by potulabe about 2 years ago - 1 comment

#18 - How to reproduce HPCA training data

Issue - State: open - Opened by scjlee about 2 years ago

#17 - rbind error in SignacBoot function

Issue - State: closed - Opened by ankur26197-acog about 2 years ago - 2 comments

#16 - The code is trying to access objects that does not exist in the dataset

Issue - State: open - Opened by mohan-acog over 2 years ago - 1 comment

#14 - Using small number of markers (n= 47) returns error

Issue - State: closed - Opened by yi6kim over 2 years ago - 1 comment

#13 - New issues running Signac X on Seurat objects

Issue - State: closed - Opened by jeremycfd over 3 years ago - 6 comments

#12 - Error in CID.LoadEdges(data.dir = spring.dir)

Issue - State: closed - Opened by SuFuBel over 3 years ago - 5 comments

#11 - down load problem with Signac

Issue - State: closed - Opened by zh-zhang1984 over 3 years ago - 6 comments

#10 - Warning messages in Signac() and then Error in GenerateLabels()

Issue - State: closed - Opened by levinhein over 3 years ago - 8 comments

#9 - Issues running Signac on newer Seurat objects

Issue - State: closed - Opened by jeremycfd over 3 years ago - 4 comments

#8 - Run Error

Issue - State: closed - Opened by JonathanNoonan over 3 years ago - 4 comments

#5 - Cholmod error 'problem too large'

Issue - State: closed - Opened by PeterCAllen over 3 years ago - 3 comments

#4 - SingleR vs SignacX

Issue - State: closed - Opened by drychkov almost 4 years ago - 1 comment

#3 - signacBoot error

Issue - State: closed - Opened by dineshmdh almost 4 years ago - 1 comment

#2 - SignacX-MASC vignette

Issue - State: closed - Opened by algarji almost 4 years ago - 1 comment