Ecosyste.ms: Issues

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GitHub / martinjrobins/diffsol issues and pull requests

#106 - feat: primer on ode modelling using diffsol

Pull Request - State: closed - Opened by martinjrobins 12 days ago

#105 - docs: update book for new api

Pull Request - State: closed - Opened by martinjrobins 17 days ago

#104 - refactor: remove use of Rc in OdeEquations trait

Pull Request - State: closed - Opened by martinjrobins 24 days ago

#103 - chore: update deps

Pull Request - State: closed - Opened by martinjrobins about 1 month ago

#102 - docs: update book to new api

Pull Request - State: closed - Opened by martinjrobins about 1 month ago

#101 - feat: add helper sensitivities and adjoint functions to method trait

Pull Request - State: closed - Opened by martinjrobins about 1 month ago

#100 - event pullbacks

Issue - State: closed - Opened by martinjrobins about 1 month ago - 1 comment

#99 - I98 adjoint

Pull Request - State: closed - Opened by martinjrobins about 2 months ago

#98 - write adjoint equations

Issue - State: closed - Opened by martinjrobins 2 months ago - 1 comment

#97 - I94-checkpointing

Pull Request - State: closed - Opened by martinjrobins 2 months ago

#96 - chore: name elided lifetime

Pull Request - State: closed - Opened by martinjrobins 2 months ago

#94 - add checkpointing

Issue - State: closed - Opened by martinjrobins 3 months ago - 1 comment

#93 - feat: solvers support reverse time (for internal use only)

Pull Request - State: closed - Opened by martinjrobins 3 months ago

#92 - add ability to solve in reverse time (initial negative h?)

Issue - State: closed - Opened by martinjrobins 3 months ago - 1 comment

#91 - SODE solver

Issue - State: open - Opened by martinjrobins 3 months ago

#89 - solve and solve_dense return a dense matrix

Issue - State: closed - Opened by martinjrobins 3 months ago

#88 - adjoint sensitivities

Issue - State: open - Opened by martinjrobins 3 months ago

#86 - feat: update diffsl to enable cranelift backend

Pull Request - State: closed - Opened by martinjrobins 3 months ago

#85 - perf(bdf, sdir): jacobian update controller

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#84 - Migrate from `anyhow` to `thiserror`

Pull Request - State: closed - Opened by mhovd 4 months ago

#82 - fix: store final timestep in OdeSolverMethod.solve

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#81 - perf: build step only if sundials enabled

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#80 - doc: add sensitivity book

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#79 - Refactor-tidy-traits

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#78 - refactor: solve returns tuple type

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#75 - docs: fill out user guide in book

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#74 - Question - ODE State at time of event

Issue - State: closed - Opened by JEMH 4 months ago - 3 comments

#73 - More-benchmarking-updates

Pull Request - State: closed - Opened by martinjrobins 4 months ago

#72 - remove unused features

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#71 - feat: new solve and solve_dense higher level api functions

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#70 - Benchmarking-updates

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#69 - Compatible with nalgebra 0.33

Pull Request - State: closed - Opened by mhovd 5 months ago - 2 comments

#68 - perf(bdf): only update step size if factor sufficiently large

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#67 - add c sundials benchmarks

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#66 - feat: add heat2d and foodweb test models

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#65 - feat: add robertson diffsl test model

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#64 - add heat2d test problem and add output function to equations

Pull Request - State: closed - Opened by martinjrobins 5 months ago

#63 - deps: update diffsl to 0.1.6

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#61 - perf: remove allocation in diff update for bdf

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#60 - perf: remove allocation in newton solver

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#59 - Newton convergence

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#58 - Reduce-allocations

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#57 - Migrating from `anyhow` to `thiserror`

Pull Request - State: closed - Opened by mhovd 6 months ago

#56 - I35-sparse-faer

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#55 - I53-forward-sens

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#54 - I48-mass-optional

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#53 - forward sensitivity

Issue - State: closed - Opened by martinjrobins 6 months ago - 2 comments

#52 - feat: add state_mut to methods #44

Pull Request - State: closed - Opened by martinjrobins 6 months ago

#48 - make mass matrix truly optional

Issue - State: closed - Opened by martinjrobins 7 months ago

#47 - use VectorView and VectorViewMut instead of &Vector and &mut Vector

Issue - State: open - Opened by martinjrobins 7 months ago - 3 comments

#46 - I42-events

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#45 - merge OdeSolverEquations and OdeSolverEquationsMassI

Issue - State: closed - Opened by martinjrobins 7 months ago
Labels: refactor

#44 - replace take_state with set_state

Issue - State: closed - Opened by martinjrobins 7 months ago - 3 comments

#43 - add optional stop time to step

Issue - State: closed - Opened by martinjrobins 7 months ago

#42 - events

Issue - State: closed - Opened by martinjrobins 7 months ago - 4 comments
Labels: enhancement

#41 - docs: faer containers, ode_equations and ops

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#40 - I9-jacobian-inplace

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#38 - I37-identity-mass

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#37 - improve handling of identity or constant mass matrix

Issue - State: closed - Opened by martinjrobins 7 months ago
Labels: optimisation

#36 - I32-clone

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#35 - implement sparse LU solver using faer

Issue - State: closed - Opened by martinjrobins 7 months ago - 2 comments
Labels: enhancement

#34 - don't initialise step size if not required

Issue - State: closed - Opened by martinjrobins 7 months ago - 1 comment
Labels: enhancement

#33 - add sdirk and esdirk methods

Pull Request - State: closed - Opened by martinjrobins 7 months ago

#32 - refactor Clone and Default for Bdf solver

Issue - State: closed - Opened by martinjrobins 8 months ago

#31 - Solvers

Pull Request - State: closed - Opened by Siel 8 months ago

#29 - Runge-Kutta methods

Issue - State: open - Opened by martinjrobins 8 months ago - 1 comment
Labels: enhancement

#28 - update Readme.md

Pull Request - State: closed - Opened by Siel 8 months ago

#27 - I23 state ownership

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#27 - I23 state ownership

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#26 - I23-state-ownership

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#25 - #3 workaround for this issue

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#24 - #19 more docs on the front-page and odeequations

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#23 - refactor OdeSolverMethod to improve state ownership

Issue - State: closed - Opened by martinjrobins 8 months ago

#22 - Docs

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#21 - Faer dense matrix

Pull Request - State: closed - Opened by Siel 8 months ago - 6 comments

#20 - #19 document OdeBuilder

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#19 - documentation

Issue - State: closed - Opened by martinjrobins 8 months ago
Labels: documentation

#18 - add clippy to ci #17

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#17 - add clippy to ci

Issue - State: closed - Opened by martinjrobins 8 months ago

#16 - #15 add benchmarks using divan

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#15 - add benchmarks comparing sundials and `Bdf` solver

Issue - State: closed - Opened by martinjrobins 8 months ago

#14 - I11-sundials-dense-ida

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#13 - implement Mul<Scale<E>> for Col<f64>

Issue - State: open - Opened by Siel 8 months ago
Labels: enhancement

#12 - Adding support for faer

Pull Request - State: closed - Opened by Siel 8 months ago - 3 comments

#10 - sundials features

Issue - State: closed - Opened by martinjrobins 8 months ago
Labels: enhancement

#9 - inplace update of jacobians

Issue - State: closed - Opened by martinjrobins 8 months ago
Labels: optimisation

#8 - Sparse jacobian

Pull Request - State: closed - Opened by martinjrobins 8 months ago

#7 - implement diffsol Vector and Matrix traits with faer

Issue - State: closed - Opened by martinjrobins 8 months ago - 1 comment
Labels: enhancement

#6 - sparse jacobian calculation

Issue - State: closed - Opened by martinjrobins 8 months ago
Labels: enhancement