Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / mani2012/PathoStat issues and pull requests
#48 - Shini not working
Issue -
State: open - Opened by DrMaestre about 3 years ago
- 1 comment
#47 - fix heatmap
Pull Request -
State: closed - Opened by jasonzhao0307 over 5 years ago
#46 - fix readPathoScope examples in taxonomy
Pull Request -
State: closed - Opened by jasonzhao0307 over 5 years ago
#45 - modify how to get tid from id
Pull Request -
State: closed - Opened by jasonzhao0307 over 5 years ago
#44 - update into new bioC release
Pull Request -
State: closed - Opened by jasonzhao0307 over 5 years ago
#43 - Update for new bioconductor release
Pull Request -
State: closed - Opened by jasonzhao0307 over 5 years ago
#42 - Added the option for .rds file when uploading PathoStat object file
Pull Request -
State: closed - Opened by anfederico about 6 years ago
#41 - Fix bray distance bug caused by vegan update
Pull Request -
State: closed - Opened by jasonzhao0307 about 6 years ago
#40 - fix few bugs
Pull Request -
State: closed - Opened by jasonzhao0307 about 6 years ago
#39 - Fix Error and Warnings
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#38 - Update pathostat
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#37 - Add data upload and filtering tab
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#36 - Modify PCA and differential analysis
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#35 - Modify dimension reduction and diversity tab
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#34 - Modify PCA/PCoA
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
- 1 comment
#33 - Add RA plot sorting function and colorbar to heatmap
Pull Request -
State: closed - Opened by jasonzhao0307 over 6 years ago
#32 - files updated after running devtools::document()
Pull Request -
State: closed - Opened by mlbendall almost 8 years ago
- 1 comment
#31 - included examples, fixed NOTE
Pull Request -
State: closed - Opened by mlbendall almost 8 years ago
#30 - CoreOTUs
Pull Request -
State: closed - Opened by mlbendall almost 8 years ago
#29 - Taxonomy table data structure
Issue -
State: open - Opened by mlbendall almost 8 years ago
- 1 comment
#28 - Improve formatting of taxonomy table
Issue -
State: open - Opened by mlbendall almost 8 years ago
#27 - Alluvial plot implemented
Pull Request -
State: closed - Opened by Sanrrone almost 8 years ago
#26 - Git ignore packrat libraries and files
Pull Request -
State: closed - Opened by mlbendall almost 8 years ago
#25 - sync alluvial plot
Pull Request -
State: closed - Opened by Sanrrone almost 8 years ago
- 4 comments
#24 - alluvial plot implemented
Pull Request -
State: closed - Opened by Sanrrone almost 8 years ago
- 2 comments
#23 - Revert "alluvial plot hard code"
Pull Request -
State: closed - Opened by mani2012 almost 8 years ago
#22 - Full covariate selection for Diff Exp tab
Pull Request -
State: closed - Opened by tfaits almost 8 years ago
- 1 comment
#21 - alluvial plot hard code
Pull Request -
State: closed - Opened by Sanrrone almost 8 years ago
- 8 comments
#20 - Enables covariate selection
Pull Request -
State: closed - Opened by tfaits almost 8 years ago
#19 - Creates covariate dropdown menu
Pull Request -
State: closed - Opened by tfaits almost 8 years ago
#18 - OTU filtering
Issue -
State: open - Opened by mlbendall almost 8 years ago
- 5 comments
#17 - Remove dependency on "microbiome"
Issue -
State: closed - Opened by mlbendall almost 8 years ago
- 5 comments
#16 - Implement core microbiome heatmap
Issue -
State: closed - Opened by mlbendall almost 8 years ago
#15 - Implement core microbiome 2D plot
Issue -
State: closed - Opened by mlbendall almost 8 years ago
#14 - Load reports
Pull Request -
State: closed - Opened by mlbendall almost 8 years ago
- 5 comments
#13 - Load phyloseq object into shiny server (temporary)
Issue -
State: closed - Opened by mlbendall almost 8 years ago
- 2 comments
#12 - Check that cached taxonomy matches with loaded reports
Issue -
State: closed - Opened by mlbendall almost 8 years ago
- 1 comment
#11 - Modularize code
Issue -
State: open - Opened by mlbendall almost 8 years ago
- 4 comments
#10 - Allows differential exp plot to pick covariates
Pull Request -
State: closed - Opened by tfaits almost 8 years ago
- 1 comment
#9 - force differential exp boxplot to use phyloseq
Pull Request -
State: closed - Opened by tfaits almost 8 years ago
#8 - Create color scheme that can be used across modules
Issue -
State: open - Opened by mlbendall almost 8 years ago
#7 - Distinguish between discrete and continuous variables
Issue -
State: open - Opened by tfaits almost 8 years ago
- 1 comment
#6 - Coerce input data into phyloseq-class objects
Issue -
State: open - Opened by tfaits almost 8 years ago
#5 - Accommodate phyloseq-class objects throughout
Issue -
State: closed - Opened by tfaits almost 8 years ago
- 1 comment
#4 - Implement temporal analysis and visualization tab
Issue -
State: open - Opened by ecastron almost 8 years ago
- 1 comment
Labels: feature
#3 - Enabled caching of taxonomy data
Pull Request -
State: closed - Opened by mlbendall about 8 years ago
- 6 comments
#2 - Relative abundance and count tables uses datatables
Pull Request -
State: closed - Opened by mlbendall about 8 years ago
#1 - BatchQC dependency
Issue -
State: closed - Opened by mlbendall about 8 years ago
- 1 comment