Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / magland/sortingview issues and pull requests

#235 - creating a new kachery zone

Issue - State: open - Opened by magland 28 days ago - 8 comments

#234 - Setup issue

Issue - State: open - Opened by GrimmSnark about 1 month ago - 1 comment

#233 - Info / requests for phy-like features

Issue - State: open - Opened by jonahpearl about 2 months ago - 3 comments

#232 - Splitting units

Issue - State: closed - Opened by RobertoDF 2 months ago - 1 comment

#231 - Get scaled traces for `SpikeSortingView`

Pull Request - State: closed - Opened by khl02007 3 months ago - 4 comments

#230 - New release ?

Issue - State: open - Opened by samuelgarcia 7 months ago - 2 comments

#227 - Cleaning up repo with help of pyright

Pull Request - State: closed - Opened by magland 11 months ago

#226 - black formatting, vscode task, gh action

Pull Request - State: closed - Opened by magland 11 months ago - 1 comment

#225 - Add waveform_percentiles to AverageWaveformItem and migrate to vite

Pull Request - State: closed - Opened by alejoe91 11 months ago

#224 - add gui to repo

Pull Request - State: closed - Opened by magland 11 months ago - 3 comments

#223 - Simpler raster view

Issue - State: open - Opened by khl02007 about 1 year ago

#222 - Add way to highlight intervals in TimeSeriesGraph

Issue - State: closed - Opened by edeno about 1 year ago - 6 comments

#221 - disable jupyter

Pull Request - State: closed - Opened by magland about 1 year ago

#220 - Error when displaying in Jupyter notebook

Issue - State: open - Opened by alejoe91 about 1 year ago - 1 comment

#219 - Make `vv.Image` zoomable

Issue - State: open - Opened by alejoe91 about 1 year ago - 1 comment

#218 - Jupyter example does not work

Issue - State: open - Opened by florian6973 over 1 year ago

#217 - Retrieving curation labels from figurl

Issue - State: open - Opened by khl02007 over 1 year ago - 1 comment

#216 - Shortcut for cluster label assignment

Issue - State: open - Opened by musall over 1 year ago

#215 - fix for index error from spike time at end of recording

Pull Request - State: closed - Opened by MichaelCoulter almost 2 years ago

#214 - temporary fix for IndexError

Pull Request - State: closed - Opened by MichaelCoulter almost 2 years ago

#213 - Static 1d decode

Pull Request - State: closed - Opened by jsoules almost 2 years ago

#212 - TimeseriesGraph: highlight time intervals

Issue - State: open - Opened by magland almost 2 years ago

#211 - figurl link leads to "Invalid figure data"

Issue - State: closed - Opened by MichaelCoulter about 2 years ago - 1 comment

#210 - Improvements to TiledImage

Pull Request - State: closed - Opened by alejoe91 about 2 years ago

#209 - TimeseriesGraph: have methods return self to enable chaining

Issue - State: closed - Opened by magland about 2 years ago - 1 comment
Labels: high priority

#208 - implement TimeseriesGraph replacement to PositionPlot

Issue - State: closed - Opened by magland about 2 years ago - 1 comment

#207 - Time offset

Pull Request - State: closed - Opened by magland about 2 years ago - 2 comments

#206 - authorization error

Issue - State: closed - Opened by MichaelCoulter about 2 years ago - 1 comment

#205 - implement spike locations

Pull Request - State: closed - Opened by magland about 2 years ago

#204 - Support `KiloSortSortingExtractor`

Issue - State: open - Opened by khl02007 about 2 years ago - 3 comments
Labels: low priority

#203 - fix for BinaryFolderRecording

Pull Request - State: closed - Opened by lfrank about 2 years ago

#202 - new pyvips package dependency

Issue - State: closed - Opened by MichaelCoulter about 2 years ago - 2 comments

#201 - cross correlograms not popuating

Issue - State: closed - Opened by MichaelCoulter about 2 years ago - 2 comments

#200 - problem with pubnub package

Issue - State: closed - Opened by lfrank about 2 years ago - 1 comment

#199 - cannot import sortingview

Issue - State: closed - Opened by khl02007 over 2 years ago - 1 comment

#198 - select viewed units by label

Issue - State: closed - Opened by lfrank over 2 years ago - 1 comment
Labels: medium priority

#197 - Enable adding list of curation labels

Pull Request - State: closed - Opened by khl02007 over 2 years ago

#196 - Cannot import sortingview

Issue - State: closed - Opened by alejoe91 over 2 years ago - 1 comment

#195 - Feature request: sort by "selected" units

Issue - State: closed - Opened by emilymonroe95 over 2 years ago - 2 comments

#194 - Conserve channel order of waveforms in no-geom-view

Issue - State: closed - Opened by emilymonroe95 over 2 years ago - 3 comments

#193 - Change position marker from line to dot for 1D multipanel view

Issue - State: closed - Opened by edeno over 2 years ago - 2 comments

#192 - Backward compatibility: cannot get recording or sorting from old workspace

Issue - State: closed - Opened by khl02007 over 2 years ago - 6 comments

#191 - Error creating spikesortingview

Issue - State: closed - Opened by khl02007 over 2 years ago - 8 comments

#190 - figurl2 wip

Pull Request - State: closed - Opened by magland over 2 years ago

#189 - implement position probability / position combo plot

Issue - State: closed - Opened by magland over 2 years ago - 9 comments

#188 - waveforms too small to clearly visualize for probe recordings

Issue - State: closed - Opened by jguides over 2 years ago - 1 comment

#187 - spike amplitude density view for long recordings

Issue - State: open - Opened by khl02007 over 2 years ago - 1 comment

#186 - position probability plot: improve color map

Issue - State: open - Opened by magland over 2 years ago - 7 comments
Labels: high priority

#185 - probability plot does not display correctly when zoomed way in

Issue - State: closed - Opened by magland over 2 years ago - 1 comment

#184 - Label min/max in vertical axis of timeseries panels

Issue - State: closed - Opened by magland over 2 years ago - 2 comments

#183 - raster plot: increase thickness of individual events when zoomed in

Issue - State: closed - Opened by magland over 2 years ago - 8 comments

#182 - mark special intervals in timeseries plots: e.g., ripple times

Issue - State: closed - Opened by magland over 2 years ago - 8 comments

#181 - position plot: provide optional min/max values so doesn't rescale with zoom

Issue - State: open - Opened by magland over 2 years ago - 2 comments

#180 - multi-timeseries view: put zoom/pan toolbar at top

Issue - State: closed - Opened by magland over 2 years ago - 2 comments
Labels: high priority

#179 - multi-timeseries: respect relativeHeight option

Issue - State: closed - Opened by magland over 2 years ago - 1 comment
Labels: high priority

#178 - implement MultiTimeseries

Pull Request - State: closed - Opened by magland over 2 years ago - 2 comments

#177 - Remove unused code & reorg so active code is no longer 'experimental'. Fixes #174.

Pull Request - State: closed - Opened by jsoules over 2 years ago - 2 comments

#176 - Only send a reasonable amount of data to the GUI

Issue - State: closed - Opened by khl02007 over 2 years ago - 2 comments

#174 - clean up sortingview python package

Issue - State: closed - Opened by magland over 2 years ago - 6 comments

#173 - multi-panel timeseries view: improve vertical layout - allow specify relative height

Issue - State: closed - Opened by magland over 2 years ago - 3 comments
Labels: high priority

#172 - multi-panel timeseries view: implement array of intervals

Issue - State: closed - Opened by magland over 2 years ago - 1 comment
Labels: high priority

#171 - in multi-panel timeseries view, include spike data (raster plot)

Issue - State: closed - Opened by magland over 2 years ago
Labels: high priority

#170 - position probability: use max rather than avg for downsample

Issue - State: closed - Opened by magland over 2 years ago
Labels: high priority

#169 - Linear position plots: top should not be cut off when zoomed out

Issue - State: closed - Opened by magland over 2 years ago - 5 comments
Labels: high priority

#168 - Linearized position plot: just use markers - don't connect points

Issue - State: closed - Opened by magland over 2 years ago - 2 comments
Labels: high priority

#167 - check type of unit ids within action

Pull Request - State: closed - Opened by dpeg22 over 2 years ago

#166 - external metrics

Issue - State: closed - Opened by magland over 2 years ago - 3 comments
Labels: high priority

#165 - minor changes

Pull Request - State: closed - Opened by dpeg22 almost 3 years ago - 1 comment

#164 - convenience methods for sorting curation on workspace

Pull Request - State: closed - Opened by magland almost 3 years ago - 2 comments

#163 - Implement adding curation actions to subfeed

Pull Request - State: closed - Opened by dpeg22 almost 3 years ago - 1 comment

#162 - Preload_extract_snippets.2 fails with small cluster

Issue - State: closed - Opened by dpeg22 almost 3 years ago - 1 comment

#161 - average waveform not displaying properly

Issue - State: closed - Opened by khl02007 almost 3 years ago - 1 comment

#160 - Add sorting_id argument to precalculate function

Issue - State: closed - Opened by dpeg22 almost 3 years ago - 2 comments

#159 - Add option to display standard deviation of waveforms

Issue - State: closed - Opened by lfrank almost 3 years ago - 1 comment

#158 - WrapperRecordingExtractor requires latest spikeinterface

Issue - State: closed - Opened by rly almost 3 years ago - 1 comment

#157 - Can't curate on figurl

Issue - State: closed - Opened by xlsun79 almost 3 years ago - 4 comments

#155 - Setting for neighborhood size

Issue - State: closed - Opened by lfrank almost 3 years ago - 5 comments

#153 - labbox recording extractor incompatibility with spikeinterface>0.90: whitening

Issue - State: closed - Opened by khl02007 almost 3 years ago - 2 comments

#151 - Precompute snippets RAM usage problem

Issue - State: closed - Opened by lfrank about 3 years ago - 1 comment

#150 - sortingview backend status check in figurl

Issue - State: open - Opened by lfrank about 3 years ago - 3 comments
Labels: medium priority

#149 - Horizontal scaling of waveforms

Issue - State: open - Opened by magland about 3 years ago - 1 comment
Labels: low priority

#147 - Bug / error case not handled in precompute waveforms

Issue - State: closed - Opened by lfrank about 3 years ago - 1 comment

#146 - Precalculation of unit waveforms, etc.

Issue - State: closed - Opened by lfrank about 3 years ago

#139 - increase subsampling for correlograms

Pull Request - State: closed - Opened by magland about 3 years ago - 1 comment

#138 - ISI violation score not implemented correctly

Issue - State: closed - Opened by rsnevers about 3 years ago - 5 comments
Labels: high priority

#126 - Full zoom out on spike amplitude view

Issue - State: closed - Opened by acomrie about 3 years ago - 2 comments
Labels: medium priority

#125 - Don't subsample when small spike count?

Issue - State: closed - Opened by acomrie about 3 years ago - 6 comments
Labels: high priority

#124 - Legend for spike amplitude view

Issue - State: open - Opened by acomrie about 3 years ago - 1 comment
Labels: low priority

#122 - Select units with a particular label

Issue - State: open - Opened by acomrie about 3 years ago - 3 comments
Labels: medium priority

#113 - figurl: implement experitime timeseries

Issue - State: closed - Opened by magland about 3 years ago

#112 - Implement shift- and ctrl-click selection handling on UnitsTable.

Pull Request - State: closed - Opened by jsoules about 3 years ago

#108 - implement figurl plotly figure

Issue - State: closed - Opened by magland about 3 years ago - 1 comment

#104 - Slow to add labels

Issue - State: closed - Opened by acomrie about 3 years ago

#103 - Show waveform on chans above and below peak chan in no-geom view

Issue - State: closed - Opened by acomrie about 3 years ago - 7 comments

#101 - Display amount of zoom

Issue - State: closed - Opened by acomrie about 3 years ago - 1 comment

#100 - Page refresh sustains open views

Issue - State: closed - Opened by acomrie about 3 years ago - 5 comments

#99 - Indicate detected peak in waveform view

Issue - State: open - Opened by acomrie about 3 years ago - 3 comments
Labels: medium priority