Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / mackelab/sbi issues and pull requests

#877 - SBI with two-stage simulator

Issue - State: closed - Opened by rmchurch 11 months ago - 2 comments

#876 - Fix spurious seeding by switching to keyword args.

Pull Request - State: closed - Opened by jan-matthis about 1 year ago - 2 comments

#875 - Active learning for expensive simulators

Issue - State: closed - Opened by jeliason about 1 year ago - 2 comments

#874 - problem with installation

Issue - State: open - Opened by atiye-nejad about 1 year ago - 5 comments

#873 - Seed error in simulator

Issue - State: open - Opened by hdahmou about 1 year ago - 3 comments
Labels: bug

#872 - Fix SMCABC summary to save epsilon history correctly.

Pull Request - State: open - Opened by arnauqb about 1 year ago - 3 comments

#871 - Large Simulations (>2000) Are slow on AMD Rome CPUs

Issue - State: closed - Opened by benczaja about 1 year ago - 2 comments

#870 - Custom Priors for SNPE

Issue - State: closed - Opened by snehjp2 about 1 year ago - 4 comments

#867 - fix: add batch dim to inv transform, add test.

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment
Labels: bug

#866 - plot_test fail with AttributeError: 'ScalarEvent' object has no attribute 'self'

Issue - State: closed - Opened by janfb about 1 year ago - 1 comment
Labels: bug

#865 - improve pairplot options

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment
Labels: enhancement

#864 - improve pairplot default args

Issue - State: closed - Opened by janfb about 1 year ago
Labels: enhancement

#863 - prepare release

Pull Request - State: closed - Opened by janfb about 1 year ago - 2 comments

#862 - Use custom dataloader for training

Issue - State: open - Opened by h3jia about 1 year ago - 2 comments

#861 - pin pyro <1.8.5

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment

#860 - Installing sbi replaces existing torch version with 2.0.1

Issue - State: closed - Opened by francois-rozet about 1 year ago - 4 comments

#859 - Adding an Y axis to marginal plots

Issue - State: closed - Opened by www3cam about 1 year ago - 1 comment

#858 - add test, wip.

Pull Request - State: closed - Opened by janfb about 1 year ago

#857 - replace mnle tutorial with iid-inference tutorial.

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment

#856 - fix: BoxUniform takes tensors and checks devices.

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment

#855 - Update docs

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment

#854 - bugfix: BoxUniform device handling.

Pull Request - State: closed - Opened by janfb about 1 year ago - 1 comment
Labels: bug

#853 - How to move the `BoxUniform` prior to a cuda device?

Issue - State: closed - Opened by ImahnShekhzadeh about 1 year ago - 5 comments

#852 - Add citation metadata in machine-parsable formats

Pull Request - State: closed - Opened by alvorithm about 1 year ago - 1 comment

#851 - Handling large feature tensor (> RAM)

Issue - State: closed - Opened by Ziaeemehr over 1 year ago - 5 comments

#850 - bugfix for website

Pull Request - State: closed - Opened by michaeldeistler over 1 year ago - 1 comment

#849 - SNVI Tutorial: Visibility in Documentation?

Issue - State: closed - Opened by ImahnShekhzadeh over 1 year ago - 1 comment

#848 - Fix pyright errors

Pull Request - State: closed - Opened by janfb over 1 year ago - 2 comments

#847 - tests are failing because of new pyright release.

Issue - State: open - Opened by janfb over 1 year ago - 1 comment
Labels: bug, blocked

#846 - typo in docstring

Pull Request - State: closed - Opened by yoavram over 1 year ago - 2 comments

#845 - How to change the neural density estimators in MNLE

Issue - State: open - Opened by Jiashun97 over 1 year ago
Labels: documentation

#844 - Add SNVI Tutorial in Docs

Pull Request - State: closed - Opened by ImahnShekhzadeh over 1 year ago - 1 comment

#843 - VIPosterior: Conditional or non-conditional?

Issue - State: closed - Opened by ImahnShekhzadeh over 1 year ago - 3 comments

#841 - Maximum-a-posterior estimate given a MultipleIndependent prior and MCMC sampler

Issue - State: closed - Opened by hdahmou over 1 year ago - 6 comments
Labels: bug

#840 - SNPE stopping criterion

Issue - State: closed - Opened by Dingel321 over 1 year ago - 1 comment

#839 - [Code Quality] Incomplete Repo information

Issue - State: closed - Opened by Haydnspass over 1 year ago
Labels: bot, dev_standard

#838 - fix: add x batch dim in sbc loop.

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment
Labels: bug

#837 - SBC fails with embedding nets if x.ndim > 1.

Issue - State: closed - Opened by janfb over 1 year ago
Labels: bug

#836 - Train/validation curves across rounds

Issue - State: closed - Opened by hdahmou over 1 year ago - 1 comment

#835 - fix handling of multiple gpus.

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment
Labels: bug

#834 - add vi posterior training to sbc, adapt test.

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment
Labels: bug

#833 - Simulation-based calibration with Variational Inference

Issue - State: closed - Opened by hdahmou over 1 year ago - 1 comment
Labels: bug

#832 - Using pretrained networks

Issue - State: closed - Opened by Dingel321 over 1 year ago - 5 comments

#831 - Embedding net training function and training loss

Issue - State: closed - Opened by meganzyf over 1 year ago - 1 comment

#830 - Example of Calibration Kernel

Issue - State: closed - Opened by rmehta1987 over 1 year ago - 3 comments

#829 - MNLE with experimental conditions

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment

#828 - Error retrieving MAP estimate when using SNRE

Issue - State: closed - Opened by hdahmou over 1 year ago - 2 comments

#827 - doc: improve z-scoring warning.

Pull Request - State: closed - Opened by janfb over 1 year ago
Labels: documentation

#826 - fix: pass allow_iid, adapt tests.

Pull Request - State: closed - Opened by janfb over 1 year ago
Labels: bug

#825 - check error and warning handling for z_scoring

Issue - State: closed - Opened by janfb over 1 year ago
Labels: documentation

#823 - Akaike information criterion

Issue - State: closed - Opened by hdahmou over 1 year ago - 17 comments

#822 - Update tests.yml

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment

#821 - pre-commit hook for isort and black.

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment

#820 - add density estimators to tests.

Pull Request - State: closed - Opened by janfb over 1 year ago - 3 comments

#819 - add MAF with RQS as density estimator

Pull Request - State: closed - Opened by ImahnShekhzadeh over 1 year ago - 11 comments

#818 - Adding RNN to MDN

Issue - State: closed - Opened by philipp128 over 1 year ago - 4 comments

#817 - theta_transform only applied during gradient ascent in rejection sampling

Issue - State: closed - Opened by bkmi over 1 year ago - 1 comment

#816 - circular import in rejection sampling

Issue - State: closed - Opened by bkmi over 1 year ago - 2 comments

#815 - Fixed a bug from CNRE

Pull Request - State: closed - Opened by bkmi over 1 year ago - 4 comments

#814 - doc: custom and independent prior handling.

Pull Request - State: closed - Opened by janfb over 1 year ago

#813 - doc: Clarify arguments of util.process_prior

Pull Request - State: closed - Opened by musoke over 1 year ago - 3 comments

#812 - How many copies of the neural networks are created during inference?

Issue - State: open - Opened by rmehta1987 over 1 year ago - 5 comments

#811 - Update tests.yml

Pull Request - State: closed - Opened by janfb over 1 year ago

#810 - fix black v23.1.0 and new pyright issues

Pull Request - State: closed - Opened by janfb over 1 year ago - 1 comment

#809 - new black and pyright version cause failing tests on main

Issue - State: closed - Opened by janfb over 1 year ago

#808 - add size invariant iid embedding nets, tests.

Pull Request - State: closed - Opened by janfb over 1 year ago - 2 comments

#806 - What is z-scoring for MCMC?

Issue - State: closed - Opened by ImahnShekhzadeh over 1 year ago - 4 comments

#803 - Patched a potential segfault when appending simulations

Pull Request - State: closed - Opened by VictorSeven over 1 year ago - 3 comments

#802 - fix abc custom distance.

Pull Request - State: closed - Opened by janfb over 1 year ago

#801 - custom distance function not passed to ABC inference

Issue - State: closed - Opened by idonthaveacommit over 1 year ago - 4 comments

#800 - code of conduct.

Pull Request - State: closed - Opened by janfb over 1 year ago

#799 - SNPE Memory Issues

Issue - State: closed - Opened by actionpotential over 1 year ago - 6 comments

#798 - resume_training no longer working

Issue - State: open - Opened by michaeldeistler over 1 year ago

#797 - Update FAQ for nan handling

Issue - State: open - Opened by michaeldeistler over 1 year ago

#796 - Match API between BNRE and NRE-C

Pull Request - State: closed - Opened by michaeldeistler almost 2 years ago

#795 - prepare release.

Pull Request - State: closed - Opened by janfb almost 2 years ago - 1 comment

#794 - SBC ranking returns incorrect ranks since 0.20.0

Issue - State: closed - Opened by janfb almost 2 years ago
Labels: bug

#793 - fix sbc reduce funs, refactor plotting.

Pull Request - State: closed - Opened by janfb almost 2 years ago - 1 comment

#792 - upgrade to codecov v3

Pull Request - State: closed - Opened by janfb almost 2 years ago

#791 - Mismatch between true and re-transformed parameters with custom prior

Issue - State: closed - Opened by pscicluna almost 2 years ago - 3 comments

#790 - log_prob fails for Restricted Prior when sampling with SIR

Issue - State: open - Opened by rmehta1987 almost 2 years ago - 8 comments

#789 - update the device for is_valid_x

Pull Request - State: closed - Opened by bkmi almost 2 years ago - 2 comments

#788 - Bug in test_embedding_nets_integration_training_device

Issue - State: closed - Opened by bkmi almost 2 years ago - 8 comments

#787 - Contrastive Neural Ratio Estimation

Pull Request - State: closed - Opened by bkmi almost 2 years ago - 17 comments

#786 - Crash with SNPE "mdn" after multi-rounds: NaN/Inf present in posterior eval.

Issue - State: open - Opened by jecampagne almost 2 years ago - 2 comments

#785 - embedding network in evaluation model?

Issue - State: closed - Opened by changhoonhahn almost 2 years ago - 2 comments

#784 - Block Neural Autoregresive Flow as proposal_nn

Issue - State: open - Opened by jecampagne almost 2 years ago - 4 comments

#783 - NeuralPosteriorEnsemble & multi-rounds

Issue - State: closed - Opened by jecampagne almost 2 years ago - 9 comments

#782 - SNPE approach for independent but non identical data

Issue - State: closed - Opened by timktsang almost 2 years ago - 2 comments

#781 - fix process simulator for multi-d x, adapt tests.

Pull Request - State: closed - Opened by janfb almost 2 years ago
Labels: bug

#780 - improve handling of multi-d x in SNPE, adapt iid test.

Pull Request - State: closed - Opened by janfb almost 2 years ago
Labels: bug, documentation

#779 - Balanced neural ratio estimation

Pull Request - State: closed - Opened by ADelau almost 2 years ago - 5 comments

#778 - `simulate_for_sbi` breaks iid simulator by automatically reshaping

Issue - State: closed - Opened by michaeldeistler almost 2 years ago - 2 comments

#777 - Rendering fix in tutorial notebook

Pull Request - State: closed - Opened by michaeldeistler almost 2 years ago

#775 - improve error handling for custom priors.

Pull Request - State: closed - Opened by janfb almost 2 years ago

#774 - Custom prior fails in list of priors checking.

Issue - State: closed - Opened by jecampagne almost 2 years ago - 3 comments

#773 - Typing (list vs List) for Python > 3.9

Issue - State: closed - Opened by rmehta1987 almost 2 years ago - 1 comment

#772 - Fixup for excluding NaN in NPE

Pull Request - State: closed - Opened by michaeldeistler almost 2 years ago