maayanlab/dex-benchmark issues and pull requests

#20 - Private Repo on Publication

Issue - State: open - Opened by u8sand over 1 year ago

#19 - https://maayanlab.github.io/dex-benchmark/website/examples.html

Issue - State: open - Opened by AviMaayan over 1 year ago

#18 - L1000 data should have dexamethasone signatures, NR3C1 perturbations (OE, KD, and KO) as separate entries

Issue - State: closed - Opened by AviMaayan over 2 years ago

#18 - L1000 data should have dexamethasone signatures, NR3C1 perturbations (OE, KD, and KO) as separate entries

Issue - State: closed - Opened by AviMaayan over 2 years ago

#17 - Add to ChIP-seq section a table with GEO entries

Issue - State: closed - Opened by AviMaayan over 2 years ago

#17 - Add to ChIP-seq section a table with GEO entries

Issue - State: closed - Opened by AviMaayan over 2 years ago

#16 - Add to ChIP-seq entries from ENCODE, Remap, ChEA3, ChEA 2016

Issue - State: closed - Opened by AviMaayan over 2 years ago

#16 - Add to ChIP-seq entries from ENCODE, Remap, ChEA3, ChEA 2016

Issue - State: closed - Opened by AviMaayan over 2 years ago

#15 - Add computed signatures under the RNA-seq data section

Issue - State: closed - Opened by AviMaayan over 2 years ago

#14 - Add L1000 data

Issue - State: closed - Opened by AviMaayan over 2 years ago

#14 - Add L1000 data

Issue - State: closed - Opened by AviMaayan over 2 years ago

#13 - Implement Benchmarking Enrichment Analysis Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#13 - Implement Benchmarking Enrichment Analysis Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#12 - Implement Benchmarking Clustering Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#12 - Implement Benchmarking Clustering Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#11 - Implement Benchmarking Data Normalization Methods notebook

Issue - State: closed - Opened by AviMaayan over 2 years ago

#11 - Implement Benchmarking Data Normalization Methods notebook

Issue - State: closed - Opened by AviMaayan over 2 years ago

#10 - Implement Benchmarking Alignment Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#10 - Implement Benchmarking Alignment Methods notebook

Issue - State: open - Opened by AviMaayan over 2 years ago

#9 - "Data" should be "Curated and Processed Datasets"

Issue - State: closed - Opened by AviMaayan over 2 years ago

#9 - "Data" should be "Curated and Processed Datasets"

Issue - State: closed - Opened by AviMaayan over 2 years ago

#8 - The paragraph at the top of the page can move to an About tab

Issue - State: closed - Opened by AviMaayan over 2 years ago

#8 - The paragraph at the top of the page can move to an About tab

Issue - State: closed - Opened by AviMaayan over 2 years ago

#7 - Stats page is missing a lot of information

Issue - State: closed - Opened by AviMaayan over 2 years ago

#6 - Under the GEN3VA table make the GSE IDs linked back to the GEO entries

Issue - State: closed - Opened by AviMaayan over 2 years ago

#5 - Create an original logo

Issue - State: closed - Opened by AviMaayan over 2 years ago

#4 - Add favicon

Issue - State: closed - Opened by AviMaayan over 2 years ago

#3 - Under the GEN3VA signatures make sure to provide a link to the GEN3VA site and a link to the citation of the paper

Issue - State: closed - Opened by AviMaayan over 2 years ago

#2 - Under the GEN3VA signatures it should be "Signature" instead of "List"

Issue - State: closed - Opened by AviMaayan over 2 years ago

#1 - Remove LINCS DCIC logo from footer

Issue - State: closed - Opened by AviMaayan over 2 years ago

Ecosyste.ms: Issues

GitHub / maayanlab/dex-benchmark issues and pull requests

#20 - Private Repo on Publication

#19 - https://maayanlab.github.io/dex-benchmark/website/examples.html

#18 - L1000 data should have dexamethasone signatures, NR3C1 perturbations (OE, KD, and KO) as separate entries

#18 - L1000 data should have dexamethasone signatures, NR3C1 perturbations (OE, KD, and KO) as separate entries

#17 - Add to ChIP-seq section a table with GEO entries

#17 - Add to ChIP-seq section a table with GEO entries

#16 - Add to ChIP-seq entries from ENCODE, Remap, ChEA3, ChEA 2016

#16 - Add to ChIP-seq entries from ENCODE, Remap, ChEA3, ChEA 2016

#15 - Add computed signatures under the RNA-seq data section

#14 - Add L1000 data

#14 - Add L1000 data

#13 - Implement Benchmarking Enrichment Analysis Methods notebook

#13 - Implement Benchmarking Enrichment Analysis Methods notebook

#12 - Implement Benchmarking Clustering Methods notebook

#12 - Implement Benchmarking Clustering Methods notebook

#11 - Implement Benchmarking Data Normalization Methods notebook

#11 - Implement Benchmarking Data Normalization Methods notebook

#10 - Implement Benchmarking Alignment Methods notebook

#10 - Implement Benchmarking Alignment Methods notebook

#9 - "Data" should be "Curated and Processed Datasets"

#9 - "Data" should be "Curated and Processed Datasets"

#8 - The paragraph at the top of the page can move to an About tab

#8 - The paragraph at the top of the page can move to an About tab

#7 - Stats page is missing a lot of information

#6 - Under the GEN3VA table make the GSE IDs linked back to the GEO entries

#5 - Create an original logo

#4 - Add favicon

#3 - Under the GEN3VA signatures make sure to provide a link to the GEN3VA site and a link to the citation of the paper

#2 - Under the GEN3VA signatures it should be "Signature" instead of "List"

#1 - Remove LINCS DCIC logo from footer