lisphilar/covid19-sir issues and pull requests

#1445 - Bump autots from 0.5.6 to 0.5.7

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1444 - Bump requests from 2.30.0 to 2.31.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1443 - Bump pyright from 1.1.308 to 1.1.309

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1442 - Bump ipykernel from 6.23.0 to 6.23.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1441 - Bump sympy from 1.11.1 to 1.12

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1440 - Update deptry version to 0.11.0 and replace ignore_obsolute with ignore_unused

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: development

#1437 - [Dev] Update test code per deptry version 0.11.0 release

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: development

#1436 - Bump deptry from 0.10.0 to 0.10.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1435 - [Data] ValueError when getting vaccination data in Japan

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: brainstorming, development

#1434 - Bump deptry from 0.8.0 to 0.10.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: Security

#1433 - Bump geopandas from 0.12.2 to 0.13.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1432 - Bump ipykernel from 6.22.0 to 6.23.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1431 - Bump requests from 2.29.0 to 2.30.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1430 - Bump pyright from 1.1.305 to 1.1.306

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1429 - Bump pyarrow from 11.0.0 to 12.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1428 - Bump pca from 2.0.0 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1427 - Bump pyright from 1.1.304 to 1.1.305

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1426 - Bump requests from 2.28.2 to 2.29.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1425 - Bump pandas from 2.0.0 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1424 - Bump numpy from 1.24.2 to 1.24.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1423 - Bump pca from 1.9.2 to 2.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1422 - Bump pyright from 1.1.303 to 1.1.304

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1421 - update DataDownloader to include 4th and 5th vaccination data for Japan

Pull Request - State: closed - Opened by lisphilar over 1 year ago - 1 comment
Labels: development

#1420 - fix "ValueError: cannot insert City, already exists" when running notebook 01_data_preparation.ipynb

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation

#1419 - [Docs] fix "ValueError: cannot insert City, already exists" when running notebook 01_data_preparation.ipynb

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation, good first issue

#1418 - update version of cancel-workflow-action from 0.10.0 to 0.11.0 to fix warning in workflow

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: development

#1417 - [Dev] update version of cancel-workflow-action from 0.10.0 to 0.11.0 to fix warning in workflow

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: brainstorming, development

#1416 - add DataEngineer().subset(get_dummies=True) as default

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation, enhancement

#1415 - [New] DataEngineer().subset() convert categorical variable into dummy/indicator variables

Issue - State: closed - Opened by lisphilar over 1 year ago - 1 comment
Labels: documentation, enhancement, brainstorming

#1414 - Use pandas 2.0.0 and date_format argument of pandas.read_csv()

Pull Request - State: closed - Opened by lisphilar over 1 year ago - 2 comments
Labels: bug

#1413 - [Bug] error/warning with 'date_parser' argument of `pandas.read_csv()` and Pandas version 2.0.0

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: bug, help wanted

#1412 - Bump pyright from 1.1.302 to 1.1.303

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1411 - Bump pytest from 7.3.0 to 7.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1410 - Bump sphinx-copybutton from 0.5.1 to 0.5.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1409 - Bump sphinx-autodoc-typehints from 1.22 to 1.23.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1408 - Bump pytest from 7.2.2 to 7.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1407 - Bump autots from 0.5.5 to 0.5.6

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1406 - Bump loguru from 0.6.0 to 0.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1405 - Bump optuna from 3.1.0 to 3.1.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1404 - Bump pyright from 1.1.301 to 1.1.302

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1403 - Bump autots from 0.5.4 to 0.5.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1402 - Bump pandas from 1.5.3 to 2.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1401 - Bump pillow from 9.4.0 to 9.5.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1400 - Bump pyright from 1.1.300 to 1.1.301

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1399 - Bump ipywidgets from 8.0.5 to 8.0.6

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1398 - Bump pca from 1.9.1 to 1.9.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1397 - Bump pyright from 1.1.299 to 1.1.300

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1396 - Bump ipywidgets from 8.0.4 to 8.0.5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1395 - Bump ipykernel from 6.21.3 to 6.22.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1394 - Bump pyright from 1.1.298 to 1.1.299

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1393 - Bump nbsphinx from 0.8.12 to 0.9.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1392 - Bump openpyxl from 3.1.1 to 3.1.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1391 - Bump nbsphinx from 0.8.12 to 0.9.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1390 - Bump ipykernel from 6.21.2 to 6.21.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1389 - Bump pyright from 1.1.296 to 1.1.298

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1388 - Bump matplotlib from 3.7.0 to 3.7.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1387 - fix errors of pull request #1386

Pull Request - State: closed - Opened by lisphilar over 1 year ago - 1 comment
Labels: bug

#1386 - data: revise vaccine data integration, add _4th and 5th columns

Pull Request - State: closed - Opened by lisphilar over 1 year ago - 1 comment
Labels: enhancement

#1385 - Bump myst-parser from 0.19.1 to 1.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1384 - Bump ipykernel from 6.21.2 to 6.21.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1383 - Bump matplotlib from 3.7.0 to 3.7.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1382 - [New] (Japan vaccination data) include 4th and 5th

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation, enhancement, brainstorming

#1381 - data: fix Japan vaccinaion aggregation method (1st, 2nd vaccinated)

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: bug

#1380 - Bump country-converter from 0.8.0 to 1.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: Security

#1379 - Bump pytest from 7.2.1 to 7.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1378 - Bump myst-parser from 0.18.1 to 0.19.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1377 - Bump pytest-cov from 3.0.0 to 4.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1376 - Bump docutils from 0.16 to 0.18.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 4 comments
Labels: Security

#1375 - Bump autopep8 from 1.7.0 to 2.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1374 - Bump myst-parser from 0.18.1 to 0.19.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: Security

#1373 - [Bug] Wrong vaccination data

Issue - State: closed - Opened by eguidotti over 1 year ago - 5 comments
Labels: bug, help wanted

#1372 - Bump pyright from 1.1.295 to 1.1.296

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1371 - Bump markdown-it-py from 2.1.0 to 2.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1370 - Bump pyright from 1.1.294 to 1.1.295

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1369 - Removed warning on README for using covsirphy with Google Colab

Pull Request - State: closed - Opened by Mihan786Chistie over 1 year ago - 3 comments

#1368 - Bump scipy from 1.10.0 to 1.10.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1367 - Bump pca from 1.9.0 to 1.9.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1366 - update citation section of README

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation

#1365 - Bump pca from 1.8.6 to 1.9.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: Security

#1364 - [Docs] update the last year in citation, 2020-2022 to 2020-2023 #1356

Pull Request - State: closed - Opened by mehrdadbn9 over 1 year ago - 3 comments

#1363 - Bump pyright from 1.1.293 to 1.1.294

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1362 - Bump typing-extensions from 4.4.0 to 4.5.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1361 - Bump matplotlib from 3.6.3 to 3.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1360 - 2022 to 2023

Pull Request - State: closed - Opened by deepgohil over 1 year ago - 3 comments
Labels: documentation

#1359 - close #1358 by updating Monkey Pox data URL

Pull Request - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation

#1358 - [Docs] fix URL of Monkey Pox data in "Data Preparation"

Issue - State: closed - Opened by lisphilar over 1 year ago
Labels: documentation, good first issue

#1357 - [Docs] update the last year in citation, 2020-2022 to 2020-2023

Pull Request - State: closed - Opened by deepgohil over 1 year ago - 2 comments
Labels: documentation

#1356 - [Docs] update the last year in citation, 2020-2022 to 2020-2023

Issue - State: closed - Opened by lisphilar over 1 year ago - 4 comments
Labels: documentation, good first issue

#1355 - Bump ipython from 8.9.0 to 8.10.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1354 - Bump sphinx-rtd-theme from 1.1.1 to 1.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1353 - Bump pyright from 1.1.292 to 1.1.293

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1352 - Bump numpy from 1.24.1 to 1.24.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: Security

#1344 - [Dev] use the latest version of deptry (version 0.8.0)

Issue - State: closed - Opened by lisphilar over 1 year ago - 2 comments
Labels: brainstorming, development

#1321 - [Bug] URLError when downloading Japan data with DataDownloader

Issue - State: closed - Opened by Venkatakrishnan-Ramesh over 1 year ago - 1 comment
Labels: bug, help wanted

#1314 - [Docs] remove warning on README for using covsirphy with Google Colab

Issue - State: closed - Opened by lisphilar almost 2 years ago - 2 comments
Labels: documentation, good first issue

#1304 - [Dev] Extending support for City level analysis importing CSV Files

Issue - State: open - Opened by AnujTiwari almost 2 years ago
Labels: question, brainstorming

#1302 - [Bug] UnExpectedValueRangeError with unexpected value of estimated rho

Issue - State: closed - Opened by shik-design almost 2 years ago - 3 comments
Labels: bug, help wanted

#1297 - Add Python 3.11 support

Pull Request - State: closed - Opened by lisphilar almost 2 years ago - 1 comment
Labels: enhancement

#1278 - [New] publish new independent package to analyse geo-spacial data

Issue - State: closed - Opened by lisphilar almost 2 years ago
Labels: documentation, enhancement, brainstorming

#1258 - [Dev] use type hint and type checker

Issue - State: open - Opened by lisphilar almost 2 years ago - 4 comments
Labels: brainstorming, development

GitHub / lisphilar/covid19-sir issues and pull requests