Ecosyste.ms: Issues

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GitHub / limebit/medmodels issues and pull requests

#102 - typo in `PyMedRecord` - rename `from_nodes_dataframe` to `from_nodes_dataframes`

Issue - State: closed - Opened by JabobKrauskopf 4 months ago
Labels: rust, python, fix, p-high

#101 - Implement omnidirectional versions for `edges_connecting` and `neighbors`

Issue - State: closed - Opened by JabobKrauskopf 4 months ago
Labels: rust, python, p-high, feat

#100 - Refactor Rust MedRecord Errors

Issue - State: open - Opened by JabobKrauskopf 4 months ago
Labels: rust, p-backlog, refactor

#99 - Improve variable naming in legacy code

Issue - State: closed - Opened by JabobKrauskopf 4 months ago - 1 comment
Labels: python, p-low

#98 - Changing the name of variables in classic distance models py

Issue - State: closed - Opened by MarIniOnz 4 months ago
Labels: python, p-low, refactor

#97 - Creating Patient Matching to dataclass

Issue - State: closed - Opened by MarIniOnz 4 months ago
Labels: python, p-low, feat

#96 - Refactor Mahalanobis metric

Pull Request - State: closed - Opened by MarIniOnz 4 months ago

#94 - Refactoring matching folder so it accommodates pyright

Issue - State: closed - Opened by MarIniOnz 4 months ago
Labels: python, p-low, refactor

#93 - feat: adding treatment effect estimation class

Pull Request - State: closed - Opened by MarIniOnz 4 months ago - 1 comment

#92 - Adding an option to edges_connecting regardless of direction of the edge

Issue - State: closed - Opened by MarIniOnz 4 months ago - 1 comment
Labels: p-medium, feat

#91 - Handling nodes with same ID

Issue - State: closed - Opened by MarIniOnz 4 months ago - 1 comment
Labels: python, p-low, feat

#90 - fix: typing of MedRecord function arguments

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#89 - Fix typing of MedRecord function arguments

Issue - State: closed - Opened by JabobKrauskopf 5 months ago - 2 comments
Labels: python, fix, p-high

#88 - feat: add from_example_dataset to medrecord

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#87 - chore: update logo url and subline

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#86 - Update logo

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: p-high, chore

#83 - Refactor `edges_connecting`

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, p-medium, refactor

#81 - Setup pyright

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: python, p-medium, build

#80 - Add examples to medrecord docstrings

Issue - State: closed - Opened by JabobKrauskopf 5 months ago - 1 comment
Labels: python, docs, p-medium

#79 - Add `raises` to medrecord docstrings

Issue - State: closed - Opened by JabobKrauskopf 5 months ago - 1 comment
Labels: python, docs, p-medium

#77 - Refactor non-keyword arguments of MedRecord

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, p-high, refactor

#76 - refactor: refactoring dataframe operations

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#75 - Fix index slicing

Issue - State: closed - Opened by LauraBoenchenLB 5 months ago
Labels: python, p-medium, refactor

#74 - Add example datasets to medrecord

Issue - State: closed - Opened by LauraBoenchenLB 5 months ago
Labels: python, p-medium, feat

#73 - Refactor dataframe operations

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, p-high, refactor

#72 - feat: Add schema validation

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#71 - fix: Fix linting errors after linter update

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#70 - Fix linting errors

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, fix, p-critical

#69 - docs: update medmodels logo

Pull Request - State: closed - Opened by OFranke 5 months ago

#68 - refactor: Throw errors when adding already existing node

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#67 - chore: Update dependencies and remove deprecated code

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#66 - Refactor Mahalanobis Metric

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: python, needs triage, refactor

#65 - Refactor Treatment Effect

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: python, p-low, refactor

#64 - Throw error when adding already existing node

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, refactor

#63 - Update dependencies

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, chore

#62 - feat: Implement mutability of medrecord node and edge attributes

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago - 1 comment

#61 - Implement mutability of medrecord node and edge attributes

Issue - State: closed - Opened by JabobKrauskopf 5 months ago
Labels: rust, python, p-high, feat

#60 - `null`

Issue - State: closed - Opened by JabobKrauskopf 5 months ago

#59 - feat: Implement None/Null value

Pull Request - State: closed - Opened by JabobKrauskopf 5 months ago

#56 - Support more index column datatypes when converting from polars

Issue - State: closed - Opened by JabobKrauskopf 6 months ago
Labels: rust, p-high, refactor

#55 - feat: add more operations to ValueOperand

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#53 - Finish tests and minor refactoring for querying mvp

Issue - State: closed - Opened by JabobKrauskopf 6 months ago
Labels: rust, python, test, refactor

#52 - feat: Implement python side of querying mvp

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#51 - fhir server connector

Issue - State: closed - Opened by FloLimebit 6 months ago
Labels: needs triage, feat

#50 - Add more operations to `ValueOperandOperation`

Issue - State: closed - Opened by JabobKrauskopf 6 months ago
Labels: rust, python, p-low, feat

#49 - feat: implement rust querying mvp

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#48 - MedRecord Querying MVP

Issue - State: closed - Opened by JabobKrauskopf 6 months ago
Labels: rust, python, p-critical, feat

#47 - Add schema and schema validation

Issue - State: closed - Opened by JabobKrauskopf 6 months ago
Labels: rust, python, p-medium, feat

#46 - chore: Add issue templates

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#45 - chore: Add CODE_OF_CONDUCT

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#44 - feat: implement missing interface

Pull Request - State: closed - Opened by JabobKrauskopf 6 months ago

#42 - `MedRecord` perfomance improvements using `rayon`

Issue - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment
Labels: rust, p-low, feat

#41 - `MedRecord` serialization and deserialization

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: rust, p-medium, feat

#40 - feat: Replace petgraph graph with custom graph library

Pull Request - State: closed - Opened by JabobKrauskopf 7 months ago

#39 - Refactor build system and tooling

Issue - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment
Labels: p-low, refactor, build, ci

#38 - feat: update github actions

Pull Request - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment

#37 - Add issue templates

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: chore

#36 - Add `CODE_OF_CONDUCT`

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: chore

#35 - Update GitHub Actions

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: ci

#34 - Improve python `MedRecord` creation

Issue - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment
Labels: python, refactor

#33 - test: Write medrecord tests

Pull Request - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment

#32 - Add `remove_edge` and `remove_node` to `MedRecord`

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: rust, python, feat

#31 - Fix inconsistent use of `String`, `&str` and `&String` in `MedRecord`

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: rust, refactor

#30 - Remove `image/` folder and use logo from website

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: docs, p-backlog, chore

#29 - Add docstrings to rust code in `crates`

Issue - State: open - Opened by JabobKrauskopf 7 months ago
Labels: rust, docs, p-backlog

#28 - docs: make docstrings adhere to google style

Pull Request - State: closed - Opened by FloLimebit 7 months ago

#27 - docs: Add docstrings to the medrecord

Pull Request - State: closed - Opened by JabobKrauskopf 7 months ago

#26 - make docstrings adhere to google style

Issue - State: closed - Opened by FloLimebit 7 months ago
Labels: python, docs

#25 - Add docstrings to `MedRecord`

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: python, docs

#24 - feat: implement medrecord from dataframe

Pull Request - State: closed - Opened by JabobKrauskopf 7 months ago

#23 - Remove limitation that index value needs to be string

Issue - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment
Labels: rust, python, refactor

#22 - Update README to add requirement of rust

Issue - State: closed - Opened by JabobKrauskopf 7 months ago - 1 comment
Labels: docs, p-low

#20 - Improve performance of `MedRecordValue` conversion

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: rust, p-high, feat

#18 - Implement `FromPyObject<'a> for PyMedRecordValue` as a look up table

Issue - State: closed - Opened by JabobKrauskopf 7 months ago
Labels: rust, p-high, feat

#17 - Implement more data types for `MedRecordValue`

Issue - State: open - Opened by JabobKrauskopf 7 months ago
Labels: rust, python, p-backlog, feat

#16 - feat: Implement MedRecordValue

Pull Request - State: closed - Opened by JabobKrauskopf 8 months ago - 1 comment

#15 - Implement `MedRecordValue` struct

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust

#14 - Reimplement medrecord creation from Dataframe

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust, python

#13 - Write tests for medrecord

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust, python

#12 - Refactor graph structure of medrecord

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust, refactor

#11 - Create feature flags

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust, p-low, feat

#9 - Refactor code structure

Issue - State: closed - Opened by JabobKrauskopf 8 months ago
Labels: rust, python

#8 - #MM8 - Refactor `add_nodes` and `add_edges` structure

Issue - State: closed - Opened by JabobKrauskopf 8 months ago - 1 comment
Labels: rust

#7 - Mm153 rust backend for dataclass

Pull Request - State: closed - Opened by JabobKrauskopf 12 months ago

#6 - fix CODEOWNERS

Pull Request - State: closed - Opened by tiurina 12 months ago

#5 - Fix the github link in the readme

Pull Request - State: closed - Opened by MarIniOnz 12 months ago

#4 - #MM4 - Write Tests for MTGAN

Issue - State: open - Opened by philippkochlimebit about 1 year ago

#3 - Add readme

Pull Request - State: closed - Opened by JabobKrauskopf about 1 year ago