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GitHub / libertem/libertem-holo issues and pull requests

#106 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 month ago - 1 comment

#105 - WIP: add helper that ensures on-CPU values

Pull Request - State: open - Opened by sk1p about 2 months ago - 1 comment

#104 - Add hanning filter to Amplitude Correlator

Pull Request - State: closed - Opened by malika576 about 2 months ago - 1 comment

#103 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 2 months ago - 1 comment

#102 - Fix cupy issues in correlators

Pull Request - State: closed - Opened by sk1p 3 months ago - 1 comment
Labels: bug

#101 - `Correlator` has some cupy-related issues

Issue - State: closed - Opened by sk1p 3 months ago

#100 - Amplitude correlator and test smoke

Pull Request - State: closed - Opened by malika576 3 months ago - 1 comment

#98 - Update installation instructions

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment

#97 - README updates

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment

#96 - Publish on conda-forge

Issue - State: closed - Opened by sk1p 4 months ago

#95 - Zenodo deposition

Issue - State: open - Opened by sk1p 4 months ago

#94 - Finalize API for v0.1 and some cleanups

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment

#93 - More example notebooks

Issue - State: open - Opened by sk1p 4 months ago

#92 - Update README.rst

Pull Request - State: closed - Opened by jvvas 4 months ago - 1 comment

#91 - Integration tests, CI with real data

Issue - State: open - Opened by sk1p 4 months ago

#90 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 4 months ago - 1 comment

#89 - Parameter validation

Issue - State: open - Opened by sk1p 4 months ago

#88 - Documentation review

Issue - State: open - Opened by sk1p 4 months ago
Labels: documentation

#87 - WIP: Integration tests w/ data

Pull Request - State: open - Opened by sk1p 4 months ago - 3 comments

#86 - Add azure pipeline definition

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment

#85 - Small stack alignment fixes; add benchmark and tests

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment

#84 - Stack alignment helper function

Pull Request - State: closed - Opened by sk1p 4 months ago - 1 comment
Labels: enhancement

#83 - Subpixel alignment in `cross_correlate`

Pull Request - State: closed - Opened by sk1p 5 months ago - 2 comments

#82 - Small bugfixes/QoL

Pull Request - State: closed - Opened by sk1p 5 months ago - 1 comment
Labels: bug

#81 - Easier way to detect holography parameters from data set

Issue - State: open - Opened by sk1p 5 months ago

#80 - Release 0.1

Issue - State: open - Opened by sk1p 5 months ago - 3 comments
Labels: prio:high

#79 - phase_offset_correction: fix for R<=2

Pull Request - State: closed - Opened by sk1p 5 months ago - 1 comment
Labels: bug

#78 - Test on Python 3.13

Pull Request - State: open - Opened by sk1p 5 months ago - 2 comments
Labels: enhancement

#77 - Performance improvements (GPU; auxiliary functions)

Pull Request - State: closed - Opened by sk1p 5 months ago - 3 comments
Labels: enhancement

#76 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago - 1 comment

#75 - Add butterworth filtered aperture functions and phase offset correction

Pull Request - State: closed - Opened by sk1p 6 months ago - 1 comment
Labels: enhancement

#74 - Misc. bugfixes

Pull Request - State: closed - Opened by sk1p 6 months ago - 1 comment

#73 - Re-organize `libertem_holo.base.mask`

Pull Request - State: closed - Opened by sk1p 6 months ago - 1 comment

#72 - Add filtering options to `HoloParams.from_hologram`

Pull Request - State: closed - Opened by sk1p 6 months ago - 1 comment

#71 - Add line filter function

Pull Request - State: closed - Opened by sk1p 6 months ago - 1 comment

#70 - Moved functions to new module for clarity

Pull Request - State: closed - Opened by malika576 6 months ago - 1 comment

#69 - Cross correlators for alignment

Pull Request - State: closed - Opened by malika576 7 months ago - 1 comment

#68 - Bright field reconstruction

Pull Request - State: closed - Opened by malika576 7 months ago

#67 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 7 months ago - 1 comment

#66 - Refactoring and reconstruction changes

Pull Request - State: closed - Opened by sk1p 8 months ago - 1 comment

#65 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 9 months ago - 1 comment

#64 - CI: Try to fix `uv pip install`

Pull Request - State: closed - Opened by sk1p 10 months ago - 1 comment

#63 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 10 months ago

#62 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 12 months ago - 1 comment

#61 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 1 comment

#60 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 1 comment

#59 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 1 comment

#58 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment

#57 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment

#56 - Update README; remove template text

Pull Request - State: closed - Opened by sk1p over 1 year ago - 1 comment

#55 - User interface

Issue - State: open - Opened by sk1p over 1 year ago - 1 comment
Labels: enhancement

#54 - Faster phase unwrapping

Issue - State: open - Opened by sk1p over 1 year ago - 2 comments
Labels: prio:low

#53 - Dependabot rollup

Pull Request - State: closed - Opened by sk1p over 1 year ago - 1 comment

#52 - Bump codecov/codecov-action from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#51 - Bump actions/deploy-pages from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#50 - Bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#49 - Bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#48 - Bump actions/upload-pages-artifact from 1.0.8 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#47 - Packaging and CI updates

Pull Request - State: closed - Opened by sk1p over 1 year ago - 1 comment

#46 - Ease-of-use helper functions

Issue - State: open - Opened by sk1p over 1 year ago

#45 - Efficient stack reconstruction and averaging

Issue - State: closed - Opened by sk1p over 1 year ago - 1 comment

#44 - Apply some performance optimizations

Issue - State: open - Opened by sk1p over 1 year ago

#43 - Allow passing the `aperture` into the reconstruction UDF

Issue - State: closed - Opened by sk1p over 1 year ago

#42 - Different `sb_size`/`sb_position` for each frame

Issue - State: open - Opened by sk1p over 1 year ago

#41 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 1 comment

#40 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#39 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment

#38 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment

#37 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment

#36 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment

#35 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#34 - Revert "Pin Python 3.7 version in CI for macos-latest"

Pull Request - State: closed - Opened by sk1p about 2 years ago

#33 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#32 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#31 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#30 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#29 - Move docs from LiberTEM main repo to this one

Issue - State: closed - Opened by sk1p about 2 years ago
Labels: documentation

#28 - CI updates

Pull Request - State: closed - Opened by sk1p about 2 years ago

#27 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 2 years ago - 1 comment

#26 - CI updates

Pull Request - State: closed - Opened by sk1p about 2 years ago

#25 - Direct reconstruction for arbitrary phase shifts

Pull Request - State: open - Opened by uellue over 3 years ago

#24 - Poisson noise fix

Pull Request - State: open - Opened by uellue over 3 years ago
Labels: bug

#23 - Integrate functions already written by Teresa

Issue - State: open - Opened by sk1p over 4 years ago

#22 - initialize rigid registration

Pull Request - State: closed - Opened by patrickadrian7 over 4 years ago - 3 comments

#21 - Add a nice introduction header to the README

Pull Request - State: closed - Opened by sk1p over 4 years ago

#20 - Update the README

Issue - State: closed - Opened by sk1p over 4 years ago - 1 comment

#19 - Allow CI failures

Pull Request - State: closed - Opened by sk1p over 4 years ago - 1 comment

#18 - Fz holo

Pull Request - State: closed - Opened by FENGSHAN95 almost 5 years ago - 2 comments

#17 - add prototype for stack alignment (WIP)

Pull Request - State: closed - Opened by sk1p almost 5 years ago

#16 - Add example notebook

Pull Request - State: closed - Opened by sk1p almost 5 years ago

#15 - Add helper function for dead pixel removal

Pull Request - State: closed - Opened by sk1p almost 5 years ago - 1 comment

#14 - Fz holo

Pull Request - State: closed - Opened by FENGSHAN95 almost 5 years ago - 1 comment

#13 - Sideband size

Issue - State: closed - Opened by FENGSHAN95 almost 5 years ago

#12 - Sideband position

Issue - State: closed - Opened by FENGSHAN95 almost 5 years ago

#11 - Edge detection

Issue - State: closed - Opened by FENGSHAN95 almost 5 years ago

#10 - add highpass, exclusion_mask, clipped filters

Pull Request - State: closed - Opened by sk1p almost 5 years ago

#9 - Diffraction contrast /dead pixel removal

Issue - State: open - Opened by FENGSHAN95 almost 5 years ago

#8 - Documentation building and uploading

Issue - State: closed - Opened by sk1p almost 5 years ago

#7 - Phase unwrap

Issue - State: closed - Opened by FENGSHAN95 almost 5 years ago