lassoan/slicertotalsegmentator issues and pull requests

#64 - How to export TotalSegmentator's default colormap?

Issue - State: closed - Opened by lzhang30 about 1 month ago - 3 comments

#63 - 【Video courses】Chinese version 3D Slicer TotalSegmentator installation and usage tutorial

Issue - State: open - Opened by simzhangbest 3 months ago

#62 - How can I convert stl to nii, and has the same shape with original image?

Issue - State: closed - Opened by fengyasi 5 months ago - 1 comment

#61 - Installation on MacBook M2

Issue - State: closed - Opened by moosmax 6 months ago

#60 - ENH: Remove no longer needed Pillow install exception

Pull Request - State: open - Opened by jamesobutler 6 months ago - 2 comments

#59 - added interactive argument to process mode

Pull Request - State: closed - Opened by evaherbst 7 months ago

#58 - Feature request: a checked box 'import labelMapVolume'

Issue - State: closed - Opened by jumbojing 8 months ago - 1 comment

#57 - Howto import the segmented `.nii` file into the scene of 'slicer' through code?

Issue - State: closed - Opened by jumbojing 8 months ago - 3 comments

#56 - Auto-segment sequences if volume belongs to a Sequence node

Pull Request - State: closed - Opened by henrykrumb 9 months ago - 1 comment

#55 - Fix incompatibility issue of latest dynamic_network_architectures

Issue - State: closed - Opened by lassoan 10 months ago - 1 comment

#54 - Various minor fixes associated with functionality in the "Advanced" section

Pull Request - State: closed - Opened by jamesobutler 10 months ago - 3 comments

#53 - Feature Request: Segment all volumes in a sequence

Issue - State: closed - Opened by henrykrumb 10 months ago - 1 comment

#52 - Consider updating mapping CSV file to include segment colors

Issue - State: open - Opened by fedorov 11 months ago - 6 comments

#51 - Failed compute to results

Issue - State: open - Opened by NHP-1999 12 months ago

#50 - GPU not found

Issue - State: open - Opened by boktae7 about 1 year ago - 6 comments

#49 - TotalSegmentator.exe': [Errno 2] No such file or directory

Issue - State: closed - Opened by Hurmean about 1 year ago - 5 comments

#48 - TotalSegmentator fails to launch on Windows with Slicer 5.4

Issue - State: closed - Opened by BishopWolf about 1 year ago - 1 comment

#47 - Feature request: Add a backend support e.g. GPU on different machine.

Issue - State: open - Opened by idhamari about 1 year ago - 2 comments

#46 - Old UI present when used with 3D Slicer 5.4.0

Issue - State: closed - Opened by rbumm about 1 year ago - 3 comments

#45 - SimpleITK problem is still present when using lungmask

Issue - State: closed - Opened by rbumm about 1 year ago - 9 comments

#44 - Print more meaningful message if package information is requested before installing TotalSegmentator

Issue - State: open - Opened by lassoan about 1 year ago

#43 - add missing structure codes

Pull Request - State: closed - Opened by fedorov about 1 year ago

#42 - Missing items from TotalSegmentator v2 mapping

Issue - State: closed - Opened by lassoan about 1 year ago - 4 comments

#41 - BUG: further refinements of the SNOMED mapping

Pull Request - State: closed - Opened by fedorov about 1 year ago

#40 - BUG: fix codes for some terms in v2 terminology

Pull Request - State: closed - Opened by fedorov about 1 year ago - 14 comments

#39 - Bump to TS 2.0.5

Pull Request - State: closed - Opened by rbumm about 1 year ago - 3 comments

#38 - Total segmentatorv2

Pull Request - State: closed - Opened by lassoan about 1 year ago - 17 comments

#37 - BUG: fix "body" segmentation task not working

Pull Request - State: closed - Opened by mauigna06 about 1 year ago

#36 - Update TotalSegmentator to 1.5.6

Pull Request - State: closed - Opened by rbumm about 1 year ago

#35 - fix snomed ct codes

Pull Request - State: closed - Opened by vkt1414 about 1 year ago - 3 comments

#34 - Force reinstall fail...

Issue - State: closed - Opened by jumbojing about 1 year ago - 1 comment

#33 - TotalSegmentator exits with code 2

Issue - State: closed - Opened by jumbojing about 1 year ago - 2 comments

#32 - TotalSegmentatorv2

Pull Request - State: closed - Opened by rbumm about 1 year ago - 33 comments

#31 - Telemetry details sent by default when using latest TotalSegmentor

Issue - State: open - Opened by jamesobutler over 1 year ago - 1 comment

#30 - DOC: update and restart dialog

Pull Request - State: closed - Opened by rbumm over 1 year ago - 1 comment

#29 - Distance between slices

Issue - State: closed - Opened by law0890 over 1 year ago - 2 comments

#28 - close

Issue - State: closed - Opened by youyouhdhd over 1 year ago - 1 comment

#27 - Total segmentator not running after restart

Issue - State: closed - Opened by law0890 over 1 year ago - 3 comments

#26 - List of tasks do not account for additional tasks available under licensing

Issue - State: closed - Opened by RafaelPalomar over 1 year ago - 1 comment

#25 - Remove unneeded workaround that downgrades scipy

Pull Request - State: closed - Opened by jamesobutler over 1 year ago

#24 - Wrong action for "fast" button

Issue - State: closed - Opened by x1y9 over 1 year ago - 2 comments

#23 - fix wrong action for "fast" button

Pull Request - State: closed - Opened by x1y9 over 1 year ago

#22 - Exception run on sample data

Issue - State: closed - Opened by x1y9 over 1 year ago - 7 comments

#21 - Pytorch 2.0 cu18 win - very slow

Issue - State: closed - Opened by ayalalazaro over 1 year ago - 2 comments

#20 - Fixed #19 Added --body_seg option

Pull Request - State: open - Opened by ayalalazaro over 1 year ago

#19 - Feature request: Add body crop

Issue - State: open - Opened by ayalalazaro over 1 year ago - 3 comments

#18 - ENH: Add roi_subset option

Pull Request - State: closed - Opened by rbumm over 1 year ago - 13 comments

#17 - SlicerTotalSegmentor fails on initial apply

Issue - State: closed - Opened by jamesobutler over 1 year ago - 8 comments

#16 - ENH: change version to TS 1.5.3

Pull Request - State: closed - Opened by rbumm over 1 year ago - 1 comment

#15 - bugfix: Exception raised when CUDA not available for a CUDA-versioned torch

Pull Request - State: closed - Opened by subelf over 1 year ago

#14 - Exception raised when CUDA not available for a CUDA-versioned torch

Issue - State: closed - Opened by subelf over 1 year ago - 4 comments

#13 - while download the pretrained weights, the url can't fetch. May I download the weights from google drive or other places. or use my own trained weights?

Issue - State: closed - Opened by simzhangbest almost 2 years ago - 2 comments

#12 - while download the pretrained weights, the url can't fetch.

Issue - State: closed - Opened by simzhangbest almost 2 years ago - 3 comments

#11 - ENH: add the TotalSegmentator roi_subset option

Pull Request - State: closed - Opened by rbumm almost 2 years ago - 7 comments

GitHub / lassoan/slicertotalsegmentator issues and pull requests