Ecosyste.ms: Issues

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GitHub / lasersonlab/phip-stat issues and pull requests

#25 - compute_pvals passing invalid value to log_GP_pmf

Issue - State: open - Opened by ypinto31 8 months ago - 1 comment

#24 - Hit calling syntax bug

Issue - State: closed - Opened by bkellman about 1 year ago - 1 comment

#23 - `phip normalize-counts`

Issue - State: closed - Opened by FarzanehRah over 1 year ago - 1 comment

#22 - [Troubleshooting] First Impression of PhiP-Seq

Issue - State: closed - Opened by Chuang1118 almost 3 years ago - 1 comment

#21 - phip merge-columns -m, no such option:-m

Issue - State: closed - Opened by yimei-li almost 3 years ago - 6 comments

#20 - about the compute-pvals commands

Issue - State: closed - Opened by MrQ-095 over 3 years ago - 14 comments

#18 - RuntimeWarning in Gamma-Poisson Modeling

Issue - State: closed - Opened by jgallowa07 over 4 years ago - 1 comment

#17 - small tweaks

Pull Request - State: closed - Opened by timodonnell over 4 years ago

#15 - phip command seems broken on current master

Issue - State: closed - Opened by timodonnell almost 6 years ago - 2 comments

#14 - Hit calling

Pull Request - State: closed - Opened by timodonnell almost 6 years ago - 2 comments

#13 - WIP: First cut on clipped factorization analysis

Pull Request - State: closed - Opened by timodonnell over 6 years ago - 2 comments

#12 - WIP First cut on mixture analysis

Pull Request - State: closed - Opened by timodonnell over 6 years ago - 1 comment

#11 - Support galaxy workflows

Issue - State: closed - Opened by laserson over 7 years ago

#10 - Better docs on compute-pvals

Issue - State: closed - Opened by laserson over 7 years ago

#9 - Add support for reading/writing gzipped files when it makes sense

Issue - State: closed - Opened by laserson almost 8 years ago

#8 - doc update

Issue - State: closed - Opened by laserson almost 8 years ago

#7 - compute-counts assumes input counts has no header line

Issue - State: closed - Opened by laserson almost 8 years ago

#6 - Note that file name for data must be .fastq

Issue - State: closed - Opened by laserson almost 8 years ago

#5 - align-parts command should not have .ebwt extension

Issue - State: closed - Opened by laserson almost 8 years ago

#4 - doc note

Issue - State: closed - Opened by laserson almost 8 years ago

#3 - Docs note

Issue - State: closed - Opened by laserson almost 8 years ago

#2 - Update docs

Issue - State: closed - Opened by laserson almost 8 years ago

#1 - Update bowtie2 command

Issue - State: closed - Opened by laserson almost 8 years ago - 2 comments