lanl/scico issues and pull requests

#576 - Omissions in `xray.astra` docs

Issue - State: open - Opened by bwohlberg 7 days ago
Labels: documentation

#575 - Docs fix

Pull Request - State: closed - Opened by bwohlberg 13 days ago - 1 comment
Labels: documentation

#574 - Add a utility function for rotating CT volumes

Pull Request - State: closed - Opened by bwohlberg 20 days ago - 1 comment
Labels: enhancement, developer

#573 - RecursionError: maximum recursion depth exceeded

Issue - State: closed - Opened by zhongxinyun about 2 months ago - 2 comments

#572 - Bump `jax` and `flax` version upper bounds

Pull Request - State: closed - Opened by bwohlberg 2 months ago - 1 comment
Labels: packaging

#571 - flax requirements updates?

Issue - State: closed - Opened by ocehugo 2 months ago - 1 comment
Labels: packaging

#570 - Remove temporary changes from pytest runs in CI

Pull Request - State: closed - Opened by bwohlberg 3 months ago - 1 comment
Labels: tests

#569 - Add call tracing module

Pull Request - State: closed - Opened by bwohlberg 3 months ago - 1 comment
Labels: enhancement

#568 - Restore running of astra tests

Pull Request - State: closed - Opened by bwohlberg 3 months ago - 1 comment
Labels: tests

#567 - Resolve #564

Pull Request - State: closed - Opened by bwohlberg 3 months ago
Labels: improvement

#566 - Set up for version 0.0.7 development

Pull Request - State: closed - Opened by bwohlberg 4 months ago
Labels: developer

#565 - Changes for release 0.0.6

Pull Request - State: closed - Opened by bwohlberg 4 months ago
Labels: developer

#564 - Improve error handling when 3d astra projector called with no GPU available

Issue - State: closed - Opened by bwohlberg 4 months ago
Labels: improvement

#563 - Clean up CT examples

Pull Request - State: closed - Opened by bwohlberg 4 months ago
Labels: examples

#562 - Switch ML examples to integrated X-ray transform

Pull Request - State: closed - Opened by bwohlberg 4 months ago
Labels: examples, improvement

#561 - Fix XRayTransform boundary conditions

Pull Request - State: closed - Opened by Michael-T-McCann 4 months ago
Labels: bug

#560 - `XRayTransform2D` fails adjoint test

Issue - State: closed - Opened by bwohlberg 4 months ago - 2 comments
Labels: bug

#559 - Suggested improvements to example scripts involving ML model training

Issue - State: open - Opened by bwohlberg 4 months ago
Labels: examples, improvement

#558 - Add filtered back projection for 2D projector

Pull Request - State: closed - Opened by bwohlberg 4 months ago - 1 comment
Labels: enhancement

#557 - Fix `XRayTransform2D` projection dtype and docs

Pull Request - State: closed - Opened by Michael-T-McCann 4 months ago - 2 comments
Labels: documentation, tests

#556 - Transition to Read the Docs Addons

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: documentation

#556 - Transition to Read the Docs Addons

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: documentation

#555 - Changes required to support `jax` version 0.4.33

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: developer

#555 - Changes required to support `jax` version 0.4.33

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: developer

#554 - Add caveat on 3D X-ray projector

Pull Request - State: closed - Opened by Michael-T-McCann 5 months ago
Labels: documentation

#554 - Add caveat on 3D X-ray projector

Pull Request - State: closed - Opened by Michael-T-McCann 5 months ago
Labels: documentation

#553 - unable to run example code

Issue - State: closed - Opened by DavidNovikov 5 months ago - 5 comments
Labels: examples, question, packaging

#553 - unable to run example code

Issue - State: closed - Opened by DavidNovikov 5 months ago - 5 comments
Labels: examples, question, packaging

#552 - Point data to correct branch

Pull Request - State: closed - Opened by Michael-T-McCann 5 months ago

#552 - Point data to correct branch

Pull Request - State: closed - Opened by Michael-T-McCann 5 months ago

#551 - Changes to `linop.xray.astra` module

Pull Request - State: closed - Opened by bwohlberg 5 months ago - 2 comments

#551 - Changes to `linop.xray.astra` module

Pull Request - State: closed - Opened by bwohlberg 5 months ago - 2 comments

#550 - Resolve some sphinx build warnings

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: documentation

#550 - Resolve some sphinx build warnings

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: documentation

#549 - Various changes

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: documentation

#549 - Various changes

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: documentation

#548 - Fix minor bug in `scico.functional.TVNorm`

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: bug

#548 - Fix minor bug in `scico.functional.TVNorm`

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: bug

#547 - Fix docs figure display in furo theme "dark" mode

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation

#547 - Fix docs figure display in furo theme "dark" mode

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation

#546 - Bump maximum supported jax version to 0.4.31

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: packaging

#546 - Bump maximum supported jax version to 0.4.31

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: packaging

#545 - Fix bug in tests and avoid variability in numerical precision across devices

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: bug, tests, improvement

#545 - Fix bug in tests and avoid variability in numerical precision across devices

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: bug, tests, improvement

#544 - Improve docs for 3D astra X-ray transform

Pull Request - State: closed - Opened by bwohlberg 7 months ago - 1 comment
Labels: documentation

#544 - Improve docs for 3D astra X-ray transform

Pull Request - State: closed - Opened by bwohlberg 7 months ago - 1 comment
Labels: documentation

#543 - Proposed changes to #541

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: bug, tests

#543 - Proposed changes to #541

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: bug, tests

#542 - Incorrect parameter descriptions for `linop.xray.Parallel2dProjector.init`

Issue - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation

#541 - Resolve #535

Pull Request - State: closed - Opened by crstngc 7 months ago
Labels: bug, developer

#541 - Resolve #535

Pull Request - State: closed - Opened by crstngc 7 months ago
Labels: bug, developer

#540 - Update examples

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: examples

#540 - Update examples

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: examples

#539 - module 'scipy.linalg' has no attribute 'tril'

Issue - State: closed - Opened by fvanmaele 7 months ago - 3 comments
Labels: question, packaging

#539 - module 'scipy.linalg' has no attribute 'tril'

Issue - State: closed - Opened by fvanmaele 7 months ago - 3 comments
Labels: question, packaging

#538 - Fix typo in docs

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation

#538 - Fix typo in docs

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation

#537 - Fix 2D X-ray projector bugs

Pull Request - State: closed - Opened by Michael-T-McCann 8 months ago
Labels: bug, examples

#537 - Fix 2D X-ray projector bugs

Pull Request - State: closed - Opened by Michael-T-McCann 8 months ago
Labels: bug, examples

#536 - Add linear operators computing gradients in non-Cartesian coordinates

Pull Request - State: closed - Opened by bwohlberg 8 months ago
Labels: enhancement

#536 - Add linear operators computing gradients in non-Cartesian coordinates

Pull Request - State: closed - Opened by bwohlberg 8 months ago
Labels: enhancement

#535 - Test failure in `scico.jax` with latest `jax` version 0.4.29

Issue - State: closed - Opened by bwohlberg 8 months ago - 1 comment
Labels: bug, developer

#534 - Apparent regression in `linop.Parallel2dProjector`

Issue - State: closed - Opened by bwohlberg 8 months ago - 1 comment
Labels: bug

#533 - Improve docs for `linop.xray` subpackage

Pull Request - State: closed - Opened by bwohlberg 8 months ago - 1 comment
Labels: documentation

#532 - Resolve #528

Pull Request - State: closed - Opened by bwohlberg 8 months ago
Labels: bug

#531 - Resolve #530

Pull Request - State: closed - Opened by bwohlberg 8 months ago
Labels: bug

#530 - Interface to ASTRA FBP broken on GPU devices

Issue - State: closed - Opened by bwohlberg 8 months ago
Labels: bug

#529 - Add JAX 3D X-ray CT projector

Pull Request - State: closed - Opened by Michael-T-McCann 8 months ago - 2 comments
Labels: enhancement

#528 - ADMM's CircularConvolveSolver not using all the parameters specified

Issue - State: closed - Opened by crstngc 8 months ago
Labels: bug

#527 - Alternative version of `indexed_shape` with a different name

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: improvement

#526 - Improve `TVNorm` implementation

Pull Request - State: closed - Opened by bwohlberg 9 months ago - 1 comment
Labels: improvement

#525 - Move Sphinx API submodule table to top of module summary

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: documentation

#524 - List submodules at top of API pages

Issue - State: closed - Opened by Michael-T-McCann 9 months ago
Labels: documentation

#523 - Resolve some deprecation warnings

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: developer

#522 - Minor docs fixes

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: documentation

#521 - Add diagonal operator mapping base operator over an array axis

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: enhancement

#520 - Fix minor error in `linop.xray.astra` docs

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: documentation

#519 - Replace indexed_shape by a version that uses jit

Pull Request - State: closed - Opened by Michael-T-McCann 9 months ago - 3 comments
Labels: improvement

#518 - Bump jaxlib/jax and flax max versions

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: developer

#517 - Add support for `np.newaxis` to indexing syntax supported by `linop.Slice`

Pull Request - State: closed - Opened by bwohlberg 9 months ago - 1 comment
Labels: improvement

#516 - Fix badge layout in main README

Pull Request - State: closed - Opened by bwohlberg 10 months ago
Labels: documentation, developer

#515 - Rearrange `ray` initialization to avoid `RuntimeWarning`

Pull Request - State: closed - Opened by bwohlberg 10 months ago
Labels: examples, tests

#514 - Update `black` version requirement and apply latest version to source

Pull Request - State: closed - Opened by bwohlberg 10 months ago
Labels: developer

#513 - `RuntimeWarning` when using `ray`

Issue - State: closed - Opened by bwohlberg 10 months ago
Labels: examples, tests

#512 - GitHub RST rendering appears to have changed

Issue - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: documentation, developer

#511 - Resolve dependency problems

Pull Request - State: closed - Opened by bwohlberg 10 months ago
Labels: developer

#510 - Incompatibility with most recent version of `orbax-checkpoint`

Issue - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: developer

#509 - Problem with custom denoiser in ADMM

Issue - State: closed - Opened by matinaz 10 months ago - 8 comments
Labels: question

#508 - Fixed minor documentation mistake

Pull Request - State: closed - Opened by Danaroth83 11 months ago - 2 comments

#507 - Add support for approximate isotropic TV norm

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment
Labels: enhancement

#506 - Fix `L21Norm` handling of `BlockArray` input

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment
Labels: bug

#505 - Improve GPU handling in `linop.xray.astra`

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment
Labels: documentation, improvement

#504 - Bump maximum `jaxlib` / `jax` version

Pull Request - State: closed - Opened by bwohlberg 12 months ago
Labels: documentation, developer

#503 - Reduce code duplication in LinOp tests

Issue - State: open - Opened by Michael-T-McCann about 1 year ago
Labels: tests

#502 - Revisit mechanism supporting math operations involving `LinearOperator` objects

Issue - State: open - Opened by bwohlberg about 1 year ago - 1 comment
Labels: discussion required, improvement

#501 - Reduce memory requirements of `Identity` linop

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

#500 - Correctly check for nested tuple in map_func_over_tuple_of_tuples

Pull Request - State: closed - Opened by Michael-T-McCann about 1 year ago - 1 comment

#499 - Inappropriate contstruction of `BlockArray` by `scico.numpy.ones`

Issue - State: closed - Opened by bwohlberg about 1 year ago
Labels: bug

#498 - Various improvements to `scico.flax` and related example scripts

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: documentation, examples, improvement

#497 - Updates to `scico.flax` needed due to changes in `orbax-checkpoint` API

Issue - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

GitHub / lanl/scico issues and pull requests