lanl/scico issues and pull requests

#535 - Test failure in `scico.jax` with latest `jax` version 0.4.29

Issue - State: open - Opened by bwohlberg 5 months ago - 1 comment
Labels: bug, developer

#534 - Apparent regression in `linop.Parallel2dProjector`

Issue - State: open - Opened by bwohlberg 5 months ago
Labels: bug

#533 - Improve docs for `linop.xray` subpackage

Pull Request - State: closed - Opened by bwohlberg 5 months ago - 1 comment
Labels: documentation

#532 - Resolve #528

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: bug

#531 - Resolve #530

Pull Request - State: closed - Opened by bwohlberg 5 months ago
Labels: bug

#530 - Interface to ASTRA FBP broken on GPU devices

Issue - State: closed - Opened by bwohlberg 5 months ago
Labels: bug

#529 - Add JAX 3D X-ray CT projector

Pull Request - State: open - Opened by Michael-T-McCann 5 months ago - 2 comments
Labels: enhancement

#528 - ADMM's CircularConvolveSolver not using all the parameters specified

Issue - State: closed - Opened by crstngc 6 months ago
Labels: bug

#527 - Alternative version of `indexed_shape` with a different name

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: improvement

#526 - Improve `TVNorm` implementation

Pull Request - State: closed - Opened by bwohlberg 6 months ago - 1 comment
Labels: improvement

#525 - Move Sphinx API submodule table to top of module summary

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: documentation

#524 - List submodules at top of API pages

Issue - State: closed - Opened by Michael-T-McCann 6 months ago
Labels: documentation

#523 - Resolve some deprecation warnings

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: developer

#522 - Minor docs fixes

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: documentation

#521 - Add diagonal operator mapping base operator over an array axis

Pull Request - State: open - Opened by bwohlberg 6 months ago
Labels: enhancement

#520 - Fix minor error in `linop.xray.astra` docs

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: documentation

#519 - Replace indexed_shape by a version that uses jit

Pull Request - State: closed - Opened by Michael-T-McCann 6 months ago - 3 comments
Labels: improvement

#518 - Bump jaxlib/jax and flax max versions

Pull Request - State: closed - Opened by bwohlberg 6 months ago
Labels: developer

#517 - Add support for `np.newaxis` to indexing syntax supported by `linop.Slice`

Pull Request - State: closed - Opened by bwohlberg 6 months ago - 1 comment
Labels: improvement

#516 - Fix badge layout in main README

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: documentation, developer

#515 - Rearrange `ray` initialization to avoid `RuntimeWarning`

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: examples, tests

#514 - Update `black` version requirement and apply latest version to source

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: developer

#513 - `RuntimeWarning` when using `ray`

Issue - State: closed - Opened by bwohlberg 7 months ago
Labels: examples, tests

#512 - GitHub RST rendering appears to have changed

Issue - State: closed - Opened by bwohlberg 7 months ago - 1 comment
Labels: documentation, developer

#511 - Resolve dependency problems

Pull Request - State: closed - Opened by bwohlberg 7 months ago
Labels: developer

#510 - Incompatibility with most recent version of `orbax-checkpoint`

Issue - State: closed - Opened by bwohlberg 7 months ago - 1 comment
Labels: developer

#509 - Problem with custom denoiser in ADMM

Issue - State: closed - Opened by matinaz 7 months ago - 8 comments
Labels: question

#508 - Fixed minor documentation mistake

Pull Request - State: closed - Opened by Danaroth83 8 months ago - 2 comments

#507 - Add support for approximate isotropic TV norm

Pull Request - State: closed - Opened by bwohlberg 9 months ago - 1 comment
Labels: enhancement

#506 - Fix `L21Norm` handling of `BlockArray` input

Pull Request - State: closed - Opened by bwohlberg 9 months ago - 1 comment
Labels: bug

#505 - Improve GPU handling in `linop.xray.astra`

Pull Request - State: closed - Opened by bwohlberg 9 months ago - 1 comment
Labels: documentation, improvement

#504 - Bump maximum `jaxlib` / `jax` version

Pull Request - State: closed - Opened by bwohlberg 9 months ago
Labels: documentation, developer

#503 - Reduce code duplication in LinOp tests

Issue - State: open - Opened by Michael-T-McCann 9 months ago
Labels: tests

#502 - Revisit mechanism supporting math operations involving `LinearOperator` objects

Issue - State: open - Opened by bwohlberg 10 months ago - 1 comment
Labels: discussion required, improvement

#501 - Reduce memory requirements of `Identity` linop

Pull Request - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: improvement

#500 - Correctly check for nested tuple in map_func_over_tuple_of_tuples

Pull Request - State: closed - Opened by Michael-T-McCann 10 months ago - 1 comment

#499 - Inappropriate contstruction of `BlockArray` by `scico.numpy.ones`

Issue - State: closed - Opened by bwohlberg 10 months ago
Labels: bug

#498 - Various improvements to `scico.flax` and related example scripts

Pull Request - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: documentation, examples, improvement

#497 - Updates to `scico.flax` needed due to changes in `orbax-checkpoint` API

Issue - State: open - Opened by bwohlberg 10 months ago
Labels: improvement

#496 - Clean up and extend `linop.xray.astra` interface

Pull Request - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: enhancement

#495 - Fix readthedocs build

Pull Request - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: documentation

#494 - Update conda installation instructions

Pull Request - State: closed - Opened by bwohlberg 10 months ago - 1 comment
Labels: documentation

#493 - Misleading extension on flax data files

Issue - State: closed - Opened by bwohlberg 11 months ago

#492 - Various changes, primarily testing-related

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: tests

#491 - Resolve packaging error

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: bug, packaging

#490 - Resolve some packaging issues

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: packaging, developer

#489 - Post-release preparation for next release

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: developer

#488 - Release 0.0.5

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: packaging, developer

#487 - Various changes

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment

#486 - Potential issues in `scico.solver`

Issue - State: open - Opened by bwohlberg 11 months ago
Labels: bug, discussion required

#485 - Resolve numerous deprecation warnings

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment

#484 - Resolve #483

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: bug

#483 - Incorrect handling of functions with no return value in `scico.numpy`

Issue - State: closed - Opened by bwohlberg 11 months ago
Labels: bug

#482 - Bump maximum supported jaxlib/jax version

Pull Request - State: closed - Opened by bwohlberg 11 months ago - 1 comment
Labels: packaging

#481 - Resolve #478

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment
Labels: bug

#480 - Resolve #479

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 2 comments
Labels: bug

#479 - Scaling of `FiniteDifference` linear operator broken

Issue - State: closed - Opened by bwohlberg 12 months ago
Labels: bug

#478 - Operator initialization failure

Issue - State: closed - Opened by bwohlberg 12 months ago
Labels: bug

#477 - Add `Operator` versions of `DiagonalStack` and `VerticalStack`

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment
Labels: enhancement

#476 - Update data submodule to point to data's current main

Pull Request - State: closed - Opened by Michael-T-McCann 12 months ago - 1 comment

#475 - Miscellaneous changes

Pull Request - State: closed - Opened by bwohlberg 12 months ago - 1 comment

#474 - Clean up TV norm branches

Pull Request - State: closed - Opened by bwohlberg 12 months ago

#473 - Update the SCICO x-ray projector

Pull Request - State: closed - Opened by Michael-T-McCann 12 months ago - 1 comment

#472 - Flax checkpoint updates

Pull Request - State: closed - Opened by crstngc about 1 year ago - 3 comments

#471 - Fix fractional centers in CircularConvolve

Pull Request - State: closed - Opened by Michael-T-McCann about 1 year ago - 1 comment

#470 - Resolve #468

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment

#469 - Add proximal average implementation

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: enhancement

#468 - Incorrect handling of scale in `Loss.grad`

Issue - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: bug

#467 - Resolve obstacles to jitting of some functionals

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 2 comments
Labels: improvement

#466 - Added a new solver for Proximal Averaged Projected Gradient Method

Pull Request - State: closed - Opened by shnaqvi about 1 year ago - 3 comments

#465 - Solve AcceleratedPGM with multiple priors applied

Issue - State: closed - Opened by shnaqvi about 1 year ago - 2 comments
Labels: enhancement

#464 - Clean up some example scripts and rerun some notebooks

Pull Request - State: closed - Opened by bwohlberg about 1 year ago
Labels: examples

#463 - Remove `ensure_on_device` function

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

#462 - Updates required by recent changes in `ray`

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

#461 - Various improvements related to the new X-ray transform implemementation.

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

#460 - Applying multiple priors with APGM solver

Issue - State: closed - Opened by shnaqvi about 1 year ago - 7 comments
Labels: question

#459 - Resolve #445

Pull Request - State: open - Opened by bwohlberg about 1 year ago - 1 comment
Labels: bug

#458 - Make bm3d and bm4d optional

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: developer

#457 - Rename linear problem solver and add parameter type checking

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: improvement

#456 - Added a new Functional for TV Norm

Pull Request - State: closed - Opened by shnaqvi about 1 year ago - 32 comments
Labels: enhancement

#455 - Address deprecation warning in `scico.flax`

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: developer

#454 - Resolve warnings with jaxlib/jax 0.4.16

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: developer

#453 - Renaming of some CT projectors

Pull Request - State: closed - Opened by bwohlberg about 1 year ago

#452 - Bump maximum `jaxlib`/`jax` versions

Pull Request - State: closed - Opened by bwohlberg about 1 year ago - 1 comment
Labels: packaging

#451 - Reevaluate need for `ensure_on_device` function

Issue - State: closed - Opened by crstngc about 1 year ago - 1 comment
Labels: improvement

#450 - Enabling use of TV prior with a forward operator with Accelerated PGM

Issue - State: closed - Opened by shnaqvi about 1 year ago - 2 comments
Labels: enhancement

#449 - Tuning penalty parameter in ProximalADMM for better deconvolution results

Issue - State: closed - Opened by shnaqvi about 1 year ago - 2 comments
Labels: question

#448 - Memory usage explosion when using AcceleratedPGM

Issue - State: closed - Opened by shnaqvi about 1 year ago - 8 comments
Labels: question

#447 - Estimating L0 parameter in AcceleratedPGM

Issue - State: closed - Opened by shnaqvi about 1 year ago - 4 comments
Labels: question

#446 - Use of TV prior in Accelerated PGM solver

Issue - State: closed - Opened by shnaqvi about 1 year ago - 4 comments
Labels: question

#445 - Linear operator multiplication with singleton array not supported

Issue - State: open - Opened by bwohlberg about 1 year ago - 1 comment
Labels: bug

#444 - Re-open issue "Proximal operator for a custom prior #437"

Issue - State: closed - Opened by matinaz about 1 year ago - 1 comment

#443 - Custom Linear Operator with CircularConvolve Operation throwing error with ADMM solver

Issue - State: closed - Opened by shnaqvi about 1 year ago - 4 comments
Labels: question

#442 - Deconvolution using Convolution Forward Operator with PDHG throwing _rmul_ not defined error

Issue - State: closed - Opened by shnaqvi about 1 year ago - 9 comments
Labels: question

#441 - Setting up Sum of Weighted Convolutions Forward Operator

Issue - State: closed - Opened by shnaqvi about 1 year ago - 3 comments
Labels: question

#440 - Deblurring with simple Gaussian kernel using ADMM not converging

Issue - State: closed - Opened by shnaqvi about 1 year ago - 5 comments
Labels: question

#439 - Setting up a simple Convolution forward operator does not return

Issue - State: closed - Opened by shnaqvi about 1 year ago - 2 comments

#438 - importing functional fails with OSError on MacOS arm64

Issue - State: closed - Opened by shnaqvi about 1 year ago - 9 comments
Labels: question, wontfix

#437 - Proximal operator for a custom prior

Issue - State: closed - Opened by matinaz about 1 year ago - 11 comments
Labels: question

#436 - Prepare for development of version 0.0.5

Pull Request - State: closed - Opened by bwohlberg over 1 year ago - 1 comment

GitHub / lanl/scico issues and pull requests