lanl/BEE issues and pull requests

#987 - Issue984/switch to ruff

Pull Request - State: open - Opened by Leahh02 29 days ago
Labels: WIP (lint-only)

#986 - Issue984/switch to pylint

Pull Request - State: open - Opened by Leahh02 about 1 month ago
Labels: WIP (lint-only)

#985 - Remove extra messages about the openapi_version

Pull Request - State: open - Opened by pagrubel about 1 month ago

#984 - Replace PyLama with Pylint

Issue - State: open - Opened by rstyd about 1 month ago
Labels: bug

#983 - Issue963/Make beeflow config new non-interactive by default

Pull Request - State: open - Opened by arhall0 about 2 months ago
Labels: WIP

#982 - Issue979/Remove metadata command

Pull Request - State: closed - Opened by arhall0 about 2 months ago
Labels: core

#981 - Fix backend issues and reset client db

Pull Request - State: open - Opened by kchilleri about 2 months ago

#980 - Add option to archive the workdir

Pull Request - State: open - Opened by arhall0 about 2 months ago
Labels: enhancement, WIP

#979 - Remove the metadata command from the beeflow client

Issue - State: closed - Opened by rstyd about 2 months ago
Labels: core

#978 - Issue976/fix overnight ci tests

Pull Request - State: closed - Opened by pagrubel about 2 months ago
Labels: WIP

#977 - Add cli commands

Pull Request - State: open - Opened by Leahh02 about 2 months ago

#976 - Fix Overnight test

Issue - State: closed - Opened by rstyd 2 months ago - 1 comment

#975 - Reorganize Common

Issue - State: open - Opened by rstyd 2 months ago
Labels: enhancement

#974 - There is a problem if beeflow is started on a compute node and that allocation is lost or an error occurs and it is exited before beeflow is stopped

Issue - State: open - Opened by pagrubel 2 months ago

#973 - Correct archives location

Pull Request - State: closed - Opened by arhall0 2 months ago - 1 comment
Labels: bug

#972 - Fix CI tests

Pull Request - State: closed - Opened by pagrubel 2 months ago

#971 - Fix the neo4j cypher warnings

Issue - State: open - Opened by pagrubel 2 months ago - 1 comment

#970 - Get rid of slurmrestd extra stuff in the logs

Issue - State: open - Opened by pagrubel 2 months ago

#969 - Add job running limit in config for the task manager

Issue - State: open - Opened by pagrubel 2 months ago

#968 - BEE needs to handle daemons on different front ends

Issue - State: open - Opened by rstyd 2 months ago
Labels: core

#967 - Add capability to run applications that are Charliecloud sqfs format (DockerRequirement) for tasks

Issue - State: open - Opened by pagrubel 2 months ago - 2 comments

#966 - Add capability to package files such as input decks or any file paths when submitting a workfow from a directory

Issue - State: open - Opened by pagrubel 2 months ago
Labels: enhancement

#965 - Issue877/Add config option for archive directory

Pull Request - State: closed - Opened by arhall0 2 months ago - 3 comments
Labels: enhancement

#964 - Add test for Cancelling Workflows

Issue - State: open - Opened by pagrubel 2 months ago

#964 - Add test for Cancelling Workflows

Issue - State: open - Opened by pagrubel 2 months ago

#963 - Non-interactive "beeflow config new"

Issue - State: open - Opened by pagrubel 2 months ago

#962 - Reverse fix for random password

Pull Request - State: closed - Opened by pagrubel 3 months ago

#961 - Upgrade acceptable versions of python to <= 3.13.0

Pull Request - State: closed - Opened by pagrubel 3 months ago

#960 - Fix Cancel Workflows

Pull Request - State: closed - Opened by Leahh02 3 months ago - 2 comments

#959 - Stuck initializing due to neo4j authorization

Issue - State: closed - Opened by Leahh02 3 months ago - 2 comments
Labels: High Priority

#958 - Update requests-unixsocket to requests-unixsocket2

Pull Request - State: closed - Opened by rstyd 3 months ago

#957 - Check for default dependency containers for new configuration

Pull Request - State: closed - Opened by pagrubel 3 months ago - 1 comment

#956 - If beeflow is started on a compute node and the allocation is stopped before beeflow is stopped it cannot be started up again

Issue - State: closed - Opened by pagrubel 3 months ago - 1 comment

#955 - Cancel Workflows not working

Issue - State: closed - Opened by pagrubel 3 months ago - 5 comments

#954 - fix excess `beeflow config new` output

Pull Request - State: closed - Opened by Leahh02 3 months ago

#953 - Fix slurmrestd version function

Pull Request - State: closed - Opened by rstyd 3 months ago - 2 comments

#952 - Bump werkzeug from 3.0.4 to 3.0.6

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago
Labels: dependencies, python

#951 - Remove excess output from `beeflow config new`

Issue - State: closed - Opened by Leahh02 3 months ago - 2 comments

#950 - Fix config issue and revise slurmrestd inference

Pull Request - State: closed - Opened by rstyd 4 months ago

#949 - beeflow config new doesn't work if there's no config file

Issue - State: closed - Opened by rstyd 4 months ago
Labels: bug

#948 - Use random pass for neo4j

Pull Request - State: closed - Opened by aquan9 4 months ago - 1 comment

#947 - Allow beeflow to run on back end node

Pull Request - State: closed - Opened by kchilleri 4 months ago - 1 comment

#946 - Add flag to allow beeflow to run on compute node

Issue - State: closed - Opened by kchilleri 4 months ago

#945 - Issue943/pull deps neo4j

Pull Request - State: closed - Opened by Leahh02 4 months ago - 4 comments

#943 - Fix "beeflow core pull-deps" to use a Dockerfile to pull the neo4j container and add the apoc file

Issue - State: closed - Opened by pagrubel 4 months ago - 1 comment
Labels: bug, High Priority

#942 - graphml to png tool

Issue - State: open - Opened by Leahh02 4 months ago
Labels: enhancement

#941 - Do not allow beeflow to run on a compute node

Pull Request - State: closed - Opened by kchilleri 4 months ago - 1 comment

#940 - Remove gdb ports from config

Pull Request - State: closed - Opened by Leahh02 4 months ago

#939 - Archive Cancelled Workflows

Pull Request - State: closed - Opened by Leahh02 4 months ago - 6 comments

#938 - Do not allow ```beeflow core start``` on compute node using Flux

Issue - State: open - Opened by kchilleri 4 months ago - 1 comment

#937 - Handle Preemption in Checkpointed Tasks

Issue - State: open - Opened by rstyd 4 months ago
Labels: next sprint

#936 - Deal with Slurm Preemption

Issue - State: open - Opened by rstyd 4 months ago

#935 - Infer Slurmrestd Version

Issue - State: open - Opened by rstyd 4 months ago
Labels: enhancement

#934 - Simplify CWL Generation Library

Issue - State: open - Opened by rstyd 4 months ago - 1 comment
Labels: enhancement

#933 - Issue883/add check for different front end

Pull Request - State: closed - Opened by kchilleri 4 months ago - 3 comments

#932 - Do not allow ```beeflow core start``` from compute node

Issue - State: closed - Opened by kchilleri 4 months ago - 2 comments

#931 - DAG Paths

Pull Request - State: closed - Opened by Leahh02 5 months ago - 4 comments

#930 - DEPENDS_ON arrows and text bold

Pull Request - State: closed - Opened by Leahh02 5 months ago
Labels: enhancement

#929 - Issue 928 fix networkx issue

Pull Request - State: closed - Opened by Leahh02 5 months ago - 1 comment

#928 - Add networkx to pyproject.toml

Issue - State: closed - Opened by pagrubel 5 months ago - 2 comments

#927 - Fix charliecloud build

Pull Request - State: open - Opened by pagrubel 5 months ago
Labels: WIP

#926 - Start new pre-release 0.1.10dev

Pull Request - State: closed - Opened by pagrubel 5 months ago

#925 - Release 0.1.9

Pull Request - State: closed - Opened by pagrubel 5 months ago

#924 - Release version 0.1.9

Pull Request - State: closed - Opened by pagrubel 5 months ago

#923 - Add task state when creating task for checkpoint

Pull Request - State: closed - Opened by pagrubel 5 months ago - 1 comment

#922 - Reorganize common and wf manager

Pull Request - State: open - Opened by kabir-vats 5 months ago
Labels: WIP

#921 - DAG Enhancements

Issue - State: closed - Opened by Leahh02 5 months ago - 5 comments
Labels: enhancement

#920 - Refactor workflow status

Pull Request - State: open - Opened by kabir-vats 5 months ago
Labels: WIP

#919 - Workflow Status Updated in Multiple Places

Issue - State: open - Opened by kabir-vats 5 months ago

#918 - Extended Container Runtime Support

Issue - State: open - Opened by rstyd 5 months ago
Labels: enhancement, next sprint

#917 - Change default test-target back to Slurmrestd

Pull Request - State: closed - Opened by aquan9 5 months ago

#916 - Bump cryptography from 42.0.8 to 43.0.1

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago
Labels: dependencies, python

#915 - Change default test target for Slurm to be slurm commands

Pull Request - State: closed - Opened by aquan9 5 months ago

#914 - No Start State

Pull Request - State: closed - Opened by Leahh02 5 months ago - 5 comments

#913 - Ci debug

Pull Request - State: closed - Opened by aquan9 5 months ago

#912 - Update deps_install.sh

Pull Request - State: closed - Opened by aquan9 5 months ago
Labels: WIP

#911 - Upgrade slurm api version for ci

Pull Request - State: closed - Opened by pagrubel 5 months ago

#910 - Updating pre-release to version 0.1.9.dev4

Pull Request - State: closed - Opened by pagrubel 5 months ago

#909 - Export dag

Pull Request - State: closed - Opened by Leahh02 5 months ago - 6 comments

#908 - beeflow core info

Pull Request - State: closed - Opened by aquan9 5 months ago - 1 comment

#907 - BEE-Dependencies-NoContainers

Issue - State: open - Opened by aquan9 6 months ago
Labels: High Priority

#906 - Add Documentation to use Generate CWL api

Issue - State: open - Opened by pagrubel 6 months ago - 1 comment

#905 - Update pre-release version to 0.1.9.dev3

Pull Request - State: closed - Opened by pagrubel 6 months ago

#904 - Fix COMD Example for the CWL Generation Library

Issue - State: open - Opened by rstyd 6 months ago

#903 - Visualize dag

Pull Request - State: closed - Opened by Leahh02 6 months ago - 2 comments
Labels: enhancement, WIP

#902 - Fix Reexecute

Pull Request - State: closed - Opened by kabir-vats 6 months ago - 4 comments

#901 - Can't cancel --no-start workflow

Issue - State: closed - Opened by Leahh02 6 months ago - 2 comments

#900 - Workdir Should be Added to the Archive (Potentially)

Issue - State: open - Opened by rstyd 6 months ago - 1 comment
Labels: discuss

#899 - Poetry developer's guide

Pull Request - State: closed - Opened by Leahh02 6 months ago - 1 comment

#898 - Move Depedency Launches to Separate Directory

Issue - State: closed - Opened by kabir-vats 6 months ago

#897 - Git workflow documentation

Pull Request - State: closed - Opened by Leahh02 6 months ago - 1 comment

#896 - Enhanced Client documentation stash

Issue - State: closed - Opened by aquan9 6 months ago - 1 comment

#895 - Remove shebang lines from pre/post scripts

Pull Request - State: closed - Opened by kchilleri 6 months ago

#894 - Cancelled Workflows - Archive

Issue - State: closed - Opened by pagrubel 6 months ago
Labels: enhancement, good first issue

#893 - Use SquashFS instead of Tar for redis and neo4j Charliecloud Containers

Issue - State: open - Opened by rstyd 6 months ago
Labels: enhancement, next sprint

GitHub / lanl/BEE issues and pull requests