laminlabs/lndb-storage issues and pull requests

#40 - :truck: Rename lndb to lamindb-storage

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 1 comment

#39 - No need of scipy in the deps?

Issue - State: open - Opened by falexwolf over 1 year ago - 3 comments

#38 - ➖ Update fsspec and move s3 and gs dependencies to extras

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 7 comments

#37 - Configurable storage backends

Issue - State: closed - Opened by falexwolf over 1 year ago - 1 comment

#36 - :memo: Add content from lamindb

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 2 comments

#35 - Move to dedicated data folder

Issue - State: open - Opened by falexwolf over 1 year ago

#34 - ⬆️ Upgrade fsspec to 2023.5.0

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 14 comments

#33 - Bump up Fsspec-related versions

Pull Request - State: closed - Opened by jlricon over 1 year ago

#32 - ✨ AnnDataAccessor for backed access to cloud AnnData attributes

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 5 comments

#31 - ✅ Use nbproject-test directly in test_notebooks.py

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 1 comment

#30 - begin cloupathlib replacement

Pull Request - State: closed - Opened by Koncopd over 1 year ago

#29 - ♻️ Refactor CloudAnnData

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 2 comments

#28 - 🦺 Check that obs and var are dataframes in subset

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 1 comment

#27 - Make requirements more flexible for boto-related dependencies

Issue - State: open - Opened by jggatter over 1 year ago - 2 comments

#26 - ✨ Add `CloudAnnData`

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 6 comments

#25 - :memo: Drastically simplify streaming guide

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 2 comments

#24 - ✅ Add additional tests for replace

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 2 comments

#23 - Cross-storage load & stage

Issue - State: open - Opened by falexwolf over 1 year ago

#22 - :green_heart: Fix source_id to run_id

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#21 - ✨ New API for storage objects manipulations

Pull Request - State: open - Opened by Koncopd over 1 year ago

#20 - ✅ Check add with key

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 2 comments

#19 - ♻️ Refactoring

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 2 comments

#18 - :recycle: Remove call to nbproject in progress bar

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 2 comments

#17 - Circular import with rc2

Issue - State: closed - Opened by Zethson over 1 year ago - 8 comments

#16 - New filename warning is raised when using same filename

Issue - State: closed - Opened by falexwolf over 1 year ago - 1 comment

#15 - Think through the UX when the exact same file exists already in the DB and `.replace()` is called

Issue - State: open - Opened by falexwolf over 1 year ago

#14 - ✅ Introduce separate upload guide

Pull Request - State: closed - Opened by falexwolf over 1 year ago - 4 comments

#13 - Fix

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#12 - 💚 Attempt fix CI

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#11 - 🚚 Move `UPath` back to `lndb`

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#10 - ✅ Add test for replace and stage

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 1 comment

#9 - ➕ Add upath to deps

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 1 comment

#8 - 🚚 Rename `DObject` to `File`

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#7 - ➖ Remove lndb as explicit dependency

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 2 comments

#6 - ✅ Test streaming here

Pull Request - State: closed - Opened by Koncopd over 1 year ago

#5 - :construction_worker: Update with latest cookiecutter

Pull Request - State: closed - Opened by falexwolf over 1 year ago

#4 - ♻️ Move the rest of storage code here

Pull Request - State: closed - Opened by Koncopd over 1 year ago - 1 comment

#3 - 🔨 Update storage code

Pull Request - State: closed - Opened by Koncopd over 1 year ago

#2 - :sparkles: cloudpathlib replacement

Pull Request - State: closed - Opened by Koncopd almost 2 years ago

#1 - 🎉 Start moving code from lamindb

Pull Request - State: closed - Opened by Koncopd almost 2 years ago

GitHub / laminlabs/lndb-storage issues and pull requests