Ecosyste.ms: Issues

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GitHub / labsyspharm/scimap issues and pull requests

#22 - Bump ipython from 7.19.0 to 7.31.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#21 - Bump pillow from 8.0.1 to 9.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#20 - Bump babel from 2.9.0 to 2.9.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#19 - Bump urllib3 from 1.26.2 to 1.26.5

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#18 - sm.pl.gate_finder

Issue - State: closed - Opened by sailseem almost 3 years ago - 6 comments

#17 - install errors

Issue - State: closed - Opened by sailseem almost 3 years ago - 2 comments

#16 - Unable to use sm.pl.image_viewer

Issue - State: closed - Opened by josenimo about 3 years ago - 5 comments

#15 - scimap to csv

Issue - State: open - Opened by ajitjohnson about 3 years ago
Labels: bug

#14 - sm.pl.foldchange runs into KeyError

Issue - State: closed - Opened by josenimo about 3 years ago - 3 comments

#13 - better lazy-loading image support in scimap.pl.image_viewer for ome-tiffs

Issue - State: open - Opened by jmuhlich over 3 years ago - 1 comment
Labels: enhancement

#12 - Fix negative values in ROI point text parsing

Pull Request - State: closed - Opened by Yu-AnChen over 3 years ago

#10 - GitHub Action to auto-build container images

Pull Request - State: closed - Opened by ArtemSokolov over 3 years ago

#9 - Output format suggestions for scimap-mcmicro

Issue - State: open - Opened by ArtemSokolov over 3 years ago

#8 - Add wrapper script for mcmicro usage

Pull Request - State: closed - Opened by Yu-AnChen over 3 years ago

#7 - Add scripts to generate adata and plots

Pull Request - State: closed - Opened by Yu-AnChen over 3 years ago

#6 - add sub_phenotyping capability to `phenotype` function

Issue - State: open - Opened by ajitjohnson over 3 years ago

#5 - Add support for ellipse omero rois

Pull Request - State: closed - Opened by Yu-AnChen almost 4 years ago - 1 comment

#4 - Pos AND neg condition treated as Pos OR neg

Issue - State: open - Opened by rjp21 almost 4 years ago

#3 - changing the grouping order in scimap.pl.stacked_barplot function

Issue - State: closed - Opened by tuuliavallius about 4 years ago - 1 comment
Labels: enhancement

#2 - drop_markers parameter in mcmicro_to_scimap function

Issue - State: closed - Opened by ajitjohnson over 4 years ago - 1 comment
Labels: bug

#1 - pandas.errors with sm.pp.mcmicro_to_scimap

Issue - State: closed - Opened by ajitjohnson over 4 years ago - 1 comment
Labels: enhancement