Ecosyste.ms: Issues

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GitHub / labsyspharm/cellcutter issues and pull requests

#12 - cells touching the edge of the image are not handled properly

Issue - State: closed - Opened by jmuhlich 8 months ago - 1 comment

#11 - Enable cell cutting from single-channel images.

Pull Request - State: closed - Opened by gjbaker about 2 years ago

#10 - Support standard TIFF files

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#9 - Fix windows bugs and check if destination already exists

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#8 - Add path to old-pyramid error message

Pull Request - State: closed - Opened by jmuhlich over 2 years ago

#7 - More defensive checks on DESTINATION path value and improved help text

Issue - State: closed - Opened by jmuhlich over 2 years ago - 2 comments

#6 - Preserve channel order

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#5 - Fix cutting only requested channels

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#4 - Support BioFormats 6 pyramid encoding

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#3 - Store all channels in the same chunk

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#2 - Add option -z for storing thumbnails in a zip file

Pull Request - State: closed - Opened by clemenshug over 2 years ago

#1 - Add a `-z` option to write zip files

Issue - State: closed - Opened by ArtemSokolov over 2 years ago