Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / labsquare/cutevariant issues and pull requests

#590 - Sharing param across project

Issue - State: open - Opened by antonylebechec 7 months ago
Labels: enhancement

#588 - How to fix plugin could not be loaded on Linux - PySide6

Issue - State: open - Opened by SteampunkIslande over 1 year ago - 3 comments
Labels: Important doc in conversation

#587 - Issue 574

Pull Request - State: open - Opened by SamuelNicaise over 1 year ago - 1 comment

#586 - Fix #585

Pull Request - State: open - Opened by SamuelNicaise over 1 year ago - 2 comments

#585 - ChoiceButton widget doesn't work anymore

Issue - State: open - Opened by SamuelNicaise over 1 year ago

#584 - Fix #581

Pull Request - State: open - Opened by SamuelNicaise over 1 year ago - 2 comments

#583 - Save position in table on refresh

Issue - State: open - Opened by SamuelNicaise over 1 year ago
Labels: enhancement, gui, medium priority

#582 - FORMAT tags not in caps lock are not loaded in the genotype table

Issue - State: open - Opened by SamuelNicaise over 1 year ago
Labels: bug

#581 - Easier way to add genotype columns to main window

Issue - State: open - Opened by SamuelNicaise over 1 year ago
Labels: enhancement

#580 - "Samples" and "current_samples" can't be used by concurrent users

Issue - State: open - Opened by SamuelNicaise over 1 year ago
Labels: bug, enhancement

#579 - Various minor suggestions

Issue - State: open - Opened by SamuelNicaise over 1 year ago
Labels: enhancement, good first issue

#578 - Filter preset on selected sample genotype

Issue - State: open - Opened by antonylebechec over 1 year ago
Labels: enhancement, core, high-priority

#577 - Version 0.4.4 does not run

Issue - State: closed - Opened by smanilov over 1 year ago - 1 comment

#576 - Change select line color

Issue - State: open - Opened by SamuelNicaise almost 2 years ago
Labels: enhancement, good first issue, high-priority

#575 - Help biologists to double check their classification changes

Issue - State: open - Opened by SamuelNicaise almost 2 years ago
Labels: enhancement, high-priority

#574 - Beautify genotype table GUI

Issue - State: open - Opened by SamuelNicaise almost 2 years ago
Labels: enhancement, gui, high-priority

#573 - Insert some INFO data in genotype table

Issue - State: open - Opened by SamuelNicaise almost 2 years ago - 1 comment
Labels: low-priority

#572 - VQF for finding private variants

Issue - State: closed - Opened by splaisan about 2 years ago - 4 comments

#571 - [bug] Genotype group widget bug

Issue - State: open - Opened by antonylebechec about 2 years ago
Labels: bug, devel

#570 - install fails on mac using conda

Issue - State: closed - Opened by splaisan about 2 years ago - 8 comments

#569 - Create a first working Nirvana Parser #445

Pull Request - State: open - Opened by dridk about 2 years ago - 1 comment

#564 - fix align et img

Pull Request - State: closed - Opened by ikit over 2 years ago - 1 comment

#563 - Revert "fix align & image size"

Pull Request - State: closed - Opened by dridk over 2 years ago - 1 comment

#562 - fix align & image size

Pull Request - State: closed - Opened by ikit over 2 years ago - 1 comment

#561 - fix flex

Pull Request - State: closed - Opened by ikit over 2 years ago - 1 comment

#560 - fix genotype icon on plugin

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 3 comments

#559 - fix source selected highlighted

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 1 comment

#558 - Main window's Filters selector is not updated properly when creating new filters

Issue - State: closed - Opened by SamuelNicaise over 2 years ago - 3 comments
Labels: low-priority

#556 - display classif names instead of numbers for variants in report

Pull Request - State: closed - Opened by SamuelNicaise over 2 years ago - 1 comment

#555 - fix code when classification empty

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#554 - fix bug when gt field is not in genotype table

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#553 - [Crash] Crash on exe - on change project

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment

#552 - [crash] Crash on exe - on open CuteVariant

Issue - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#551 - fix filters delete preset bug load model #544

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#550 - add style for genotypes on variant view

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#549 - [Sources] Selected source in bold/white not visible on Bright style

Issue - State: closed - Opened by antonylebechec over 2 years ago - 2 comments
Labels: gui

#548 - [VQL] restart cutevariant: incoherence between VQL query and Variant view

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: bug, core, vql, CRITICAL

#547 - Fix change icons

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 4 comments

#546 - Revert "new sample report template"

Pull Request - State: closed - Opened by dridk over 2 years ago - 1 comment

#545 - Add multiselection to samples plugin

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#544 - Deleted filter presets reappears after saving new preset

Issue - State: closed - Opened by SamuelNicaise over 2 years ago

#543 - new sample report template

Pull Request - State: closed - Opened by SamuelNicaise over 2 years ago - 2 comments

#542 - Fix lag on sample classification and selection #541

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#541 - [SQL] Classification of a sample take a while

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: core, CRITICAL

#535 - fix selection source on double click

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 1 comment

#534 - Report fix

Pull Request - State: closed - Opened by SamuelNicaise over 2 years ago - 2 comments

#533 - fix genotype history on classification

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 1 comment

#532 - fix bug on toolbar search name

Pull Request - State: closed - Opened by antonylebechec over 2 years ago - 2 comments

#488 - Create pedigree tab in sample dialog

Issue - State: closed - Opened by dridk over 2 years ago - 2 comments
Labels: devel

#461 - Create CuteVariantProxyStyle

Issue - State: closed - Opened by dridk over 2 years ago
Labels: enhancement

#460 - report module

Issue - State: closed - Opened by dridk over 2 years ago
Labels: enhancement

#459 - Groupby context menu in variant_view

Issue - State: closed - Opened by dridk over 2 years ago
Labels: enhancement

#452 - Fix order by

Issue - State: closed - Opened by dridk over 2 years ago - 2 comments

#447 - Preset export / import from Json

Issue - State: closed - Opened by dridk over 2 years ago

#438 - Classification des variants depuis la variant_view

Issue - State: closed - Opened by dridk over 2 years ago - 1 comment

#426 - Tester SampleDialog et VariantDialog

Issue - State: closed - Opened by dridk over 2 years ago
Labels: good first issue, devel

#425 - [VQL] enable "value" in filters as à column

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement, core

#424 - [SQL] Count number of validated genotype for each variant

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: bug, core, high-priority

#423 - [VQL] Add $selected features

Issue - State: open - Opened by dridk over 2 years ago - 6 comments
Labels: enhancement, core, high-priority

#421 - [Samples Query List] Samples not in state when running new query

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment

#420 - [Variant View] No contextual menu on variant line

Issue - State: closed - Opened by antonylebechec over 2 years ago - 3 comments

#411 - [import VCF] Create a tag on imported samples to identify the import id

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: enhancement, core, high-priority

#409 - [PED] Add information in PED column

Issue - State: open - Opened by antonylebechec over 2 years ago - 1 comment
Labels: enhancement

#408 - [Edit Sample] Add more information on Edit Sample

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: enhancement

#406 - [SQL] Operational Error: too many FROM clause terms, max 200

Issue - State: open - Opened by antonylebechec over 2 years ago - 4 comments
Labels: bug, core, high-priority

#404 - [preset modification] Save used preset and ask for modification or new preset

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: enhancement, high-priority

#401 - [tags] Variants tags color bug

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: bug

#400 - [presets] Modification of presets' names

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement, low-priority

#397 - [import VCF] Cancel button disabled

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: bug, low-priority

#396 - [import VCF] Behavior if sample already exists in DB

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement, gui

#395 - [validation] Validate a variant for multiple samples at the time impossible

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: bug, enhancement, gui

#390 - [Order By] no interface yet

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: enhancement, gui, low-priority

#389 - [Export] fail VCF exporting, more suggestions

Issue - State: closed - Opened by antonylebechec over 2 years ago - 2 comments
Labels: bug, core

#381 - [QWebEngine] Bug with QWebEngin on Windows

Issue - State: closed - Opened by antonylebechec over 2 years ago

#380 - [EditSample] Export a report file for a sample

Issue - State: closed - Opened by antonylebechec over 2 years ago - 2 comments
Labels: plugin

#379 - [OrderBy] Add an order by option on multiple fields

Issue - State: open - Opened by antonylebechec over 2 years ago
Labels: gui, core

#377 - [tags] Tags on contextual menu

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: CRITICAL, plugin

#375 - [quick search] Improve quick search

Issue - State: open - Opened by antonylebechec over 2 years ago - 7 comments
Labels: enhancement, core

#374 - [assembly] Add assembly from VCF into db

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: enhancement, core

#373 - [validation] some bugs and improvements

Issue - State: closed - Opened by antonylebechec over 2 years ago - 3 comments
Labels: bug, core, CRITICAL, plugin

#358 - Renaming ...

Issue - State: closed - Opened by dridk over 2 years ago

#342 - Fix typo..

Issue - State: closed - Opened by dridk over 2 years ago

#332 - [Gene search] Bug when using "-" in gene name

Issue - State: closed - Opened by antonylebechec over 2 years ago - 2 comments
Labels: bug, low-priority

#331 - [default variant id fields] Define in preferences fields to identify main variant information

Issue - State: closed - Opened by antonylebechec over 2 years ago - 3 comments
Labels: core, medium priority

#329 - [View] Modify "Source view" with "View" concept

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: wontfix, medium priority

#327 - [tags] add, filter, create, store tags for variants, samples, sample_has_variant...

Issue - State: closed - Opened by antonylebechec over 2 years ago - 1 comment
Labels: medium priority

#325 - [Filters editor] [Fields editor] Presets like "Clear"/"All"

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: medium priority

#324 - [Sample View] Filter and source from current selection

Issue - State: closed - Opened by antonylebechec over 2 years ago
Labels: high-priority

#317 - Various errors in Plugin Documentation

Issue - State: closed - Opened by ccarco almost 3 years ago - 2 comments

#315 - CORS issues with IGV plugin

Issue - State: closed - Opened by SamuelNicaise almost 3 years ago - 5 comments

#311 - Sample search and sample groups

Issue - State: closed - Opened by SamuelNicaise almost 3 years ago

#309 - Variant/Sample link (priority: #3)

Issue - State: closed - Opened by SamuelNicaise about 3 years ago
Labels: high-priority

#306 - Classification on more than selected variants

Issue - State: closed - Opened by bioinfo-chru-strasbourg about 3 years ago - 2 comments

#305 - [source editor ] show progress bar

Issue - State: closed - Opened by dridk about 3 years ago

#300 - [VQL] optimize multiple sample selection

Issue - State: closed - Opened by dridk about 3 years ago

#297 - [VQL] enhancement

Issue - State: closed - Opened by dridk about 3 years ago