Ecosyste.ms: Issues

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GitHub / kzkedzierska/sonics issues and pull requests

#20 - Install Issue with pymc_extracted

Issue - State: closed - Opened by qiutip 12 months ago

#19 - Can SONiCS deal with compound or interrupted microsatellites?

Issue - State: open - Opened by ericopolo 12 months ago - 2 comments

#18 - cleaned up

Pull Request - State: closed - Opened by kzkedzierska about 3 years ago

#17 - clean up directory

Issue - State: open - Opened by kzkedzierska about 3 years ago

#16 - Develop

Pull Request - State: closed - Opened by kzkedzierska about 3 years ago

#15 - help

Issue - State: closed - Opened by zhangjinpengGithub about 3 years ago - 5 comments

#14 - allow install via pip

Issue - State: open - Opened by kzkedzierska over 4 years ago

#13 - create conda env file to run pymc

Issue - State: closed - Opened by kzkedzierska over 4 years ago

#12 - pymc not compatible with current python versions

Issue - State: closed - Opened by kzkedzierska over 4 years ago - 1 comment
Labels: bug

#11 - Monte carlo

Pull Request - State: closed - Opened by kzkedzierska over 6 years ago

#10 - Monte Carlo option

Issue - State: closed - Opened by kzkedzierska over 6 years ago

#9 - introduced all three conditions and did some changes to the output

Pull Request - State: closed - Opened by kzkedzierska over 6 years ago

#8 - adding option for logging intermediate simulation results

Pull Request - State: closed - Opened by kzkedzierska over 6 years ago

#7 - Major update - details in comments

Pull Request - State: closed - Opened by kzkedzierska over 6 years ago

#6 - let sonics create output dir if it does not exist

Issue - State: closed - Opened by kzkedzierska over 6 years ago

#5 - add parrallelization

Issue - State: closed - Opened by kzkedzierska over 6 years ago
Labels: enhancement

#4 - Create LICENSE

Pull Request - State: closed - Opened by aakrosh almost 7 years ago

#3 - Saving the output

Issue - State: closed - Opened by kzkedzierska almost 7 years ago

#2 - The number of copies in the reference genome could be float

Issue - State: closed - Opened by aakrosh almost 7 years ago

#1 - Changes to setup of the software

Pull Request - State: closed - Opened by aakrosh almost 7 years ago