Ecosyste.ms: Issues

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GitHub / kylebarron/medicare_utils issues and pull requests

#63 - Bump wheel from 0.30.0 to 0.38.1

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#62 - Bump pip from 19.2 to 21.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#61 - Bump pip from 9.0.1 to 19.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#60 - Use JSON crosswalks to convert variable names

Pull Request - State: closed - Opened by kylebarron about 6 years ago

#59 - Fix Parquet data exports to load in Spark

Pull Request - State: closed - Opened by kylebarron about 6 years ago

#58 - Buyin vars left in pl dataset

Issue - State: open - Opened by kylebarron about 6 years ago

#56 - Add time to logging messages

Issue - State: open - Opened by kylebarron over 6 years ago

#54 - Variable names extension

Issue - State: open - Opened by kylebarron over 6 years ago

#53 - Should get_cohort be person-year level?

Issue - State: closed - Opened by kylebarron over 6 years ago

#52 - Debug performance in _get_cohort_age_year_filter

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#50 - Write data to disk if I'm using too much memory

Issue - State: open - Opened by kylebarron over 6 years ago

#49 - Only import claimindex/clm_id in correct years

Issue - State: open - Opened by kylebarron over 6 years ago

#48 - Add to_stata wrapper

Issue - State: closed - Opened by kylebarron over 6 years ago

#46 - Put search_for_codes joining in separate function

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#45 - Add tests for keep_vars regex arguments

Issue - State: open - Opened by kylebarron over 6 years ago

#44 - Add more filtering options to get_cohort

Issue - State: open - Opened by kylebarron over 6 years ago - 1 comment

#43 - Create Conda package

Issue - State: closed - Opened by kylebarron over 6 years ago

#41 - Add snappy compression as dependency

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#40 - fix codes paths to catch if trailing / not provided

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: codes

#39 - med.codes.hcpcs() doesn't create (parent) directory if it doesn't exist

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: codes

#38 - rename data to metadata

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#37 - Fix `scan_file` to work if no tokeep is empty

Issue - State: open - Opened by kylebarron over 6 years ago

#36 - add module-level dask option once dask is programmed for `search_for_codes`

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#35 - provide redirect for "zip_cd" -> "bene_zip"

Issue - State: closed - Opened by kylebarron over 6 years ago

#34 - add right join functionality

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#33 - test parquet datasets comprised of multiple files

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: parquet

#32 - allow keeping variables by regular expression

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: get_cohort

#31 - Optionally merge result from search_for_codes to person-level dataset

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: search_for_codes

#30 - raise an error when an item in `keep_vars` doesn't exist in the desired dataset

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: search_for_codes

#29 - don't allow a `rename` argument to be provided when `collapse_codes` is `True`.

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: search_for_codes

#28 - Add columns attribute to npi

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: codes

#27 - get icd9 hierarchy from icd9.com

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: codes

#26 - TypeError: can only concatenate tuple (not "str") to tuple

Issue - State: closed - Opened by kylebarron over 6 years ago - 2 comments
Labels: get_cohort

#25 - pass range of years to codes functions when loading

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: codes

#24 - Allow keeping beneficiary-level column in search_for_codes()

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#23 - Change proc to sg and diag to dx to be in line with usual cms abbreviations

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment
Labels: codes

#22 - Create folder if it doesn't exist

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: codes

#21 - Automatically fall back to Stata file usage if parquet file not found

Issue - State: open - Opened by kylebarron over 6 years ago - 2 comments

#20 - Add rename option to search_for_codes

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: search_for_codes

#19 - If no codes are provided, don't create 'match' variable

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: search_for_codes

#18 - Add tests!

Issue - State: open - Opened by kylebarron over 6 years ago - 5 comments

#17 - Figure out better merging across years

Issue - State: closed - Opened by kylebarron over 6 years ago - 3 comments
Labels: get_cohort

#16 - Add to nobs_dropped the number deleted when buyin_months == 'all'

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment
Labels: get_cohort

#15 - When merge is outer, need some kind of notification for which year person came from

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment
Labels: get_cohort

#14 - Alert when variable in keep_vars is unmatched

Issue - State: closed - Opened by kylebarron over 6 years ago

#12 - Consolidate main() and convert_med() into one function

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: parquet

#11 - copy npi codebook and readme to NPI data folder as well

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: codes

#10 - update dependencies

Issue - State: closed - Opened by kylebarron over 6 years ago

#9 - change pq_vars()

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#8 - Allow dtypes argument when passing CSV to convert to parquet

Issue - State: open - Opened by kylebarron over 6 years ago
Labels: parquet

#7 - Update rename_dict to common folder

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#6 - Add functions to add value labels onto data for categorical data

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#5 - BUG: Can't coerce np.NaN to integer

Issue - State: closed - Opened by kylebarron over 6 years ago
Labels: bug

#4 - convert md to rst before pypi upload

Issue - State: closed - Opened by kylebarron over 6 years ago - 2 comments

#3 - Add "levels" argument to search_for_codes()

Issue - State: closed - Opened by kylebarron over 6 years ago

#2 - Try to save downloaded codes in package folder

Issue - State: closed - Opened by kylebarron over 6 years ago - 1 comment

#1 - try dta to pq conversion with pyarrow

Issue - State: closed - Opened by kylebarron over 6 years ago