Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / kundajelab/genomelake issues and pull requests

#22 - JUND HepG2 data for all chromosomes

Issue - State: open - Opened by berkuva over 4 years ago

#21 - Add support for Python 3.7

Issue - State: open - Opened by mmtrebuchet over 5 years ago - 6 comments

#20 - Invalid Base Issue

Issue - State: closed - Opened by mmingay2 almost 6 years ago - 1 comment

#19 - migrated from pysam to pyfaidx

Pull Request - State: open - Opened by Avsecz about 6 years ago - 2 comments

#18 - Migrate from pysam to pyfaidx

Issue - State: open - Opened by Avsecz about 6 years ago - 2 comments

#17 - Open the bigwig file only once

Pull Request - State: closed - Opened by Avsecz over 6 years ago - 8 comments

#16 - Add TileDB backend (#1)

Pull Request - State: closed - Opened by chrisprobert over 6 years ago - 1 comment

#15 - Speed of genomelake vs. pyfasta for DNA sequence loading

Issue - State: closed - Opened by AvantiShri over 6 years ago - 8 comments

#14 - ImportError: No module named util

Issue - State: closed - Opened by AvantiShri over 6 years ago - 4 comments

#13 - The README mixes tabs and spaces

Pull Request - State: closed - Opened by daquang over 6 years ago - 1 comment

#12 - Handle ambiguous letters other than N/n, allowed by IUPAC conventions.

Pull Request - State: open - Opened by manyu90 over 6 years ago - 22 comments

#11 - bigwig tests

Pull Request - State: closed - Opened by jisraeli over 6 years ago - 2 comments

#10 - test ArrayExtractor on fasta

Pull Request - State: closed - Opened by jisraeli over 6 years ago - 2 comments

#9 - Coveralls and status badges

Pull Request - State: closed - Opened by jisraeli over 6 years ago

#8 - FastaExtractor tests and CI

Pull Request - State: closed - Opened by jisraeli over 6 years ago

#7 - fix BigwigExtractor import

Pull Request - State: closed - Opened by Avsecz over 6 years ago

#6 - BigwigExtractor error

Issue - State: closed - Opened by Avsecz over 6 years ago - 2 comments

#5 - keep fasta in memory

Pull Request - State: closed - Opened by jorenretel over 6 years ago - 1 comment

#4 - readme enable python code highlighting

Pull Request - State: closed - Opened by Avsecz over 6 years ago

#3 - install cython and parse README in setup.py

Pull Request - State: closed - Opened by jisraeli over 6 years ago

#2 - stranded fasta extraction

Pull Request - State: closed - Opened by jisraeli over 6 years ago

#1 - Python3 support

Pull Request - State: closed - Opened by jisraeli over 6 years ago