krisrs1128/microbiome_pred issues and pull requests

#62 - Writing

Pull Request - State: closed - Opened by krisrs1128 about 7 years ago

#61 - Update fbar

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#60 - load libraries needed to send batch jobs

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#59 - Need word conditional in conditional models

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#58 - Update partial dep

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#57 - need to maintain measure ids as column names

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#56 - Avoid princomp function

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#55 - Match responses

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#54 - Debug predict

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#53 - bad paren

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#52 - Binarize factor

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#51 - Make sure to get correct columns from PCA

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#50 - Use only two cores

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#49 - Typo in immpost

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#48 - Imm post

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#47 - Conf revise

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#46 - Create evaluation for conditional case

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#45 - mean impute

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#44 - Eval vis

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#43 - Update rdata

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#42 - Label models according to binary vs. conditional

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#41 - rename gbm -> xgbTree

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#40 - Remove nas in pca

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#39 - New confs

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#38 - I don't think the labels were saved correctly last time

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#37 - Write json

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#36 - Static figures

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#35 - Some further figure revisions

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#34 - Debugging predict

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#33 - Discussion

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#32 - Partial figs

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#31 - Don't quite if one of the parsings failed

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#30 - new script run in batch

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#29 - Interpreting predictions

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#28 - Remove unecessary arg to responses.R

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#27 - Update confs

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#26 - Partial dependence function

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#25 - Binary response

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#24 - Training conditional positive model

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#23 - require train_control argument for all model confs

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#22 - Cores update

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#21 - Visualizing features & read train control

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#20 - Batch updates

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#19 - Pca feature

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#18 - Pred figs brainstorm

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#17 - Tree ix feature

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#16 - Taxa features

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#15 - More preprocessing and featurization options

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#14 - Ensemble eval

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#13 - Retrain ensemble

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#12 - Retrain all

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#11 - Featurize all

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#10 - Ensemble script

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#9 - Evaluate

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#8 - Prediction

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#7 - Model setup

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#6 - Responses

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#5 - Train test

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#4 - Initial feature

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#3 - CV splits

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#2 - Preprocessing

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

#1 - Setup data

Pull Request - State: closed - Opened by krisrs1128 over 7 years ago

GitHub / krisrs1128/microbiome_pred issues and pull requests