konstantint/pyliftover issues and pull requests

#19 - conversion error from hg19 to hg38 in pyliftover

Issue - State: closed - Opened by Dearwunan 3 months ago - 3 comments

#18 - UCSC link has changes to https://hgdownload2.soe.ucsc.edu/

Pull Request - State: closed - Opened by NizanHellman 8 months ago

#17 - different hg19 positions map to the same hg38 position

Issue - State: closed - Opened by LuoPangpang over 1 year ago - 2 comments

#16 - Missing Output for Some Positions

Issue - State: closed - Opened by matty234 about 2 years ago - 2 comments

#15 - PAR1 and PAR2 liftover from hg19 to hg38?

Issue - State: open - Opened by Shicheng-Guo over 2 years ago - 1 comment

#14 - Difference from binary liftOver

Issue - State: closed - Opened by rkimoakbioinformatics about 4 years ago

#13 - Interesting mapping and re-mapping results. Expert opinion please???

Issue - State: closed - Opened by Peter-J-Freeman over 4 years ago - 1 comment

#12 - weird liftover

Issue - State: closed - Opened by wyatt-t-clark about 5 years ago

#11 - Problem converting hg38 to hg19

Issue - State: closed - Opened by nicokrez about 5 years ago - 2 comments

#10 - coordinate 2bp shift for some and not for others

Issue - State: closed - Opened by zhangtaowhu over 5 years ago - 7 comments

#9 - problem with loading canFam3ToHg38.over.chain

Issue - State: open - Opened by rkimoakbioinformatics over 5 years ago - 6 comments

#8 - Conversion results may differ from what is obtained with LiftOver

Issue - State: closed - Opened by yvancluet over 5 years ago - 1 comment

#7 - Deprecation warning - urlopen

Issue - State: closed - Opened by TeriForey over 5 years ago - 1 comment

#6 - empty return for hg19 to hg38

Issue - State: closed - Opened by Seb-Leb over 6 years ago - 1 comment

#5 - convert_coordinate fails with zero-based indices (but unity-based works)

Issue - State: closed - Opened by ofrei over 7 years ago - 4 comments

#4 - Some incorrect conversions from hg38 to hg19 even on '+' strand

Issue - State: closed - Opened by iljungr over 8 years ago - 1 comment

#3 - pyliftover won't map some locations on chr1 from hg38 to hg19