Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / klavinslab/coral issues and pull requests

#37 - ubuntu-22.04-python3

Issue - State: open - Opened by ahmadhussein7 about 1 year ago - 1 comment

#36 - Bump wheel from 0.29.0 to 0.38.1

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#35 - Bump numpy from 1.10.2 to 1.22.0

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#34 - Bump numpy from 1.10.2 to 1.21.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#33 - addition between strings and ssDNA or DNA ignore ordering

Issue - State: closed - Opened by christakahashi over 6 years ago - 2 comments

#32 - Allow digests with enzymes containing 'N' in recognition site, fixes #31

Pull Request - State: closed - Opened by blthree almost 8 years ago

#31 - Restriction sites containing ambiguous bases do not digest targets

Issue - State: closed - Opened by blthree almost 8 years ago - 3 comments

#30 - Merge release 0.5.0

Pull Request - State: closed - Opened by nbolten almost 9 years ago

#29 - Sequencing overhaul, adding MAFFT and Needleman-Wunsch-based MSA

Pull Request - State: closed - Opened by nbolten almost 9 years ago

#28 - Sequencing overhaul, adding MAFFT and Needleman-Wunsch-based MSA

Pull Request - State: closed - Opened by nbolten almost 9 years ago

#26 - First-class ssDNA and ssRNA objects

Pull Request - State: closed - Opened by nbolten about 9 years ago

#25 - Version 0.4.3 release

Pull Request - State: closed - Opened by nbolten about 9 years ago

#24 - 0.4.2 Release

Pull Request - State: closed - Opened by nbolten about 9 years ago

#23 - 0.4.0 Release

Pull Request - State: closed - Opened by nbolten about 9 years ago

#22 - New ViennaRNA and NUPACK modules

Pull Request - State: closed - Opened by nbolten about 9 years ago

#21 - Excise features from circular DNA, generating linear DNA

Pull Request - State: closed - Opened by nbolten about 9 years ago

#20 - Coral will install in Python 3 environment, but then fails to import.

Issue - State: closed - Opened by cgevans about 9 years ago - 2 comments

#19 - Release 0.3.2

Pull Request - State: closed - Opened by nbolten about 9 years ago

#18 - Merge 0.3.1 Release

Pull Request - State: closed - Opened by nbolten about 9 years ago

#17 - analysis.anneal can now anneal a primer longer than the template

Pull Request - State: closed - Opened by nbolten about 9 years ago

#16 - Updated annealing and PCR logic

Pull Request - State: closed - Opened by nbolten about 9 years ago

#15 - Primer dimer amplification error

Issue - State: closed - Opened by sundipta about 9 years ago - 1 comment

#14 - Can't anneal a primer longer than the template

Issue - State: closed - Opened by nbolten about 9 years ago - 1 comment

#13 - Version 0.3.0 Release

Pull Request - State: closed - Opened by nbolten about 9 years ago

#12 - Annotate fix with pcr

Pull Request - State: closed - Opened by jvrana about 9 years ago - 1 comment

#11 - Bug Fixes to Gibson Annotation

Pull Request - State: closed - Opened by jvrana about 9 years ago - 1 comment

#10 - Slicing the last N bases of a coral.DNA object modifies the parent features

Issue - State: closed - Opened by jvrana about 9 years ago - 4 comments

#9 - PCRGibsonOverhaul

Pull Request - State: closed - Opened by jvrana about 9 years ago - 1 comment

#8 - Updates to Anneal Reaction

Pull Request - State: closed - Opened by jvrana about 9 years ago

#7 - PrimerBindingReaction

Pull Request - State: closed - Opened by jvrana about 9 years ago - 2 comments

#6 - D3 Sequence Visualization for iPython Notebooks

Pull Request - State: closed - Opened by nbolten about 9 years ago

#5 - Searchable features

Pull Request - State: closed - Opened by nbolten about 9 years ago

#4 - Sequencemodel

Pull Request - State: closed - Opened by nbolten over 9 years ago

#2 - DNA type doesn't include annotation colors

Issue - State: closed - Opened by eyu-boltthreads over 9 years ago - 2 comments

#1 - Cython has to be run manually

Issue - State: closed - Opened by uycire over 9 years ago - 2 comments