Ecosyste.ms: Issues

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GitHub / kitwaremedical/lungair-desktop-application issues and pull requests

#62 - DOC: Discuss docker image creation and use in README.md

Pull Request - State: closed - Opened by Leengit about 2 years ago
Labels: documentation

#62 - DOC: Discuss docker image creation and use in README.md

Pull Request - State: closed - Opened by Leengit about 2 years ago
Labels: documentation

#61 - add acknowledgements

Pull Request - State: closed - Opened by ebrahimebrahim about 2 years ago

#61 - add acknowledgements

Pull Request - State: closed - Opened by ebrahimebrahim about 2 years ago

#60 - add notice file

Issue - State: open - Opened by ebrahimebrahim about 2 years ago

#60 - add notice file

Issue - State: open - Opened by ebrahimebrahim about 2 years ago

#59 - application loads incorrectly

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: bug

#59 - application loads incorrectly

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: bug

#57 - STYLE: Update python code with blank line fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago
Labels: style

#57 - STYLE: Update python code with blank line fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago
Labels: style

#56 - STYLE: Remove unused python imports

Pull Request - State: closed - Opened by jcfr about 2 years ago - 1 comment
Labels: style

#56 - STYLE: Remove unused python imports

Pull Request - State: closed - Opened by jcfr about 2 years ago - 1 comment
Labels: style

#55 - STYLE: Python formatting with `black -l 120 -C`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 4 comments
Labels: style

#55 - STYLE: Python formatting with `black -l 120 -C`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 4 comments
Labels: style

#54 - STYLE: Update python code with whitespace fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago

#54 - STYLE: Update python code with whitespace fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago

#53 - STYLE: Satisfy `flake8` via `black`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 3 comments

#53 - STYLE: Satisfy `flake8` via `black`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 3 comments

#52 - STYLE: Update python code with indentation fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago - 2 comments

#52 - STYLE: Update python code with indentation fixes

Pull Request - State: closed - Opened by jcfr about 2 years ago - 2 comments

#51 - STYLE: Reformat Python code with `black`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 16 comments
Labels: style

#51 - STYLE: Reformat Python code with `black`

Pull Request - State: closed - Opened by Leengit about 2 years ago - 16 comments
Labels: style

#50 - Fix typos

Pull Request - State: closed - Opened by jcfr about 2 years ago

#50 - Fix typos

Pull Request - State: closed - Opened by jcfr about 2 years ago

#49 - STYLE: Change docker-requirements.txt to useful-requirements.txt

Pull Request - State: closed - Opened by Leengit about 2 years ago

#49 - STYLE: Change docker-requirements.txt to useful-requirements.txt

Pull Request - State: closed - Opened by Leengit about 2 years ago

#48 - BUG: Remove version information that will become stale

Pull Request - State: closed - Opened by Leengit about 2 years ago

#48 - BUG: Remove version information that will become stale

Pull Request - State: closed - Opened by Leengit about 2 years ago

#47 - Change the docker image visibility to public

Issue - State: closed - Opened by ebrahimebrahim about 2 years ago - 9 comments

#47 - Change the docker image visibility to public

Issue - State: closed - Opened by ebrahimebrahim about 2 years ago - 9 comments

#46 - Modify README.md to give instructions for using the docker image.

Issue - State: closed - Opened by ebrahimebrahim about 2 years ago
Labels: documentation

#46 - Modify README.md to give instructions for using the docker image.

Issue - State: closed - Opened by ebrahimebrahim about 2 years ago
Labels: documentation

#45 - refactor SegmentationModel into subclasses based on backend

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: enhancement

#45 - refactor SegmentationModel into subclasses based on backend

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: enhancement

#44 - decouple SegmentationModel from Xray

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: enhancement

#44 - decouple SegmentationModel from Xray

Issue - State: open - Opened by ebrahimebrahim about 2 years ago
Labels: enhancement

#43 - Add dummy Dockerfile and GHAction workflow to publish

Pull Request - State: closed - Opened by banesullivan about 2 years ago - 3 comments

#43 - Add dummy Dockerfile and GHAction workflow to publish

Pull Request - State: closed - Opened by banesullivan about 2 years ago - 3 comments

#42 - load EHR data from a FHIR server

Issue - State: open - Opened by ebrahimebrahim over 2 years ago

#42 - load EHR data from a FHIR server

Issue - State: open - Opened by ebrahimebrahim over 2 years ago

#41 - Provide torch segmentation model via MONAI Deploy

Pull Request - State: closed - Opened by Leengit over 2 years ago - 37 comments

#41 - Provide torch segmentation model via MONAI Deploy

Pull Request - State: closed - Opened by Leengit over 2 years ago - 37 comments

#40 - update light_the_torch usage

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#40 - update light_the_torch usage

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#39 - Building successful but python modules not being found

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago - 8 comments
Labels: bug

#39 - Building successful but python modules not being found

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago - 8 comments
Labels: bug

#38 - Simplify and fix linting workflow

Pull Request - State: closed - Opened by jcfr over 2 years ago - 2 comments

#38 - Simplify and fix linting workflow

Pull Request - State: closed - Opened by jcfr over 2 years ago - 2 comments

#37 - COMP: Add missing flake8 and pre-commit-config

Pull Request - State: closed - Opened by jcfr over 2 years ago - 2 comments

#37 - COMP: Add missing flake8 and pre-commit-config

Pull Request - State: closed - Opened by jcfr over 2 years ago - 2 comments

#36 - add some github actions

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#36 - add some github actions

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#35 - load images from DICOM server

Issue - State: open - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#35 - load images from DICOM server

Issue - State: open - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#34 - update slicer and change git protocol

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#34 - update slicer and change git protocol

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#33 - add a bar plot

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#33 - add a bar plot

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago

#32 - add some kind of bar plot

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#32 - add some kind of bar plot

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#31 - introduce CI into repository

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#31 - introduce CI into repository

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#30 - add DICOM validation

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago - 1 comment

#30 - add DICOM validation

Pull Request - State: closed - Opened by ebrahimebrahim over 2 years ago - 1 comment

#29 - delete old nodes and subject hierarchy items when done with them

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: bug

#29 - delete old nodes and subject hierarchy items when done with them

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: bug

#28 - properly set initial size of split view

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago - 1 comment
Labels: enhancement

#27 - error displayed while loading fio2 plot

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: bug

#26 - make plot view and slice view controls consistent

Issue - State: open - Opened by ebrahimebrahim over 2 years ago - 1 comment
Labels: enhancement

#25 - make tables not editable

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: bug

#24 - improve table appearance

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#23 - introduce an EHR dataset that contains NICU data

Issue - State: open - Opened by ebrahimebrahim over 2 years ago
Labels: enhancement

#22 - use tabbed type layout or get functionality of resetting plot view in some other way

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago - 1 comment
Labels: enhancement

#21 - interactive plots

Issue - State: closed - Opened by ebrahimebrahim over 2 years ago - 1 comment
Labels: enhancement

#20 - implement a way of displaying records

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 1 comment
Labels: enhancement

#19 - fix barWidget alignment

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago
Labels: bug

#18 - improve monai install method

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#17 - customize widgets in under slice view pin icon

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#16 - peform validation when loading DICOM objects

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 1 comment
Labels: enhancement

#15 - crash when switching out of transforms module

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago - 9 comments
Labels: bug, low priority

#14 - add approval widget for extracted features

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#13 - split lung fields into quadrants

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#12 - Extend directory-based image loading to work with dicom

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#11 - Include ITK python wrapping as part of build

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago
Labels: bug

#10 - copy correct set of files during build

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago

#9 - consider using slicer's built in numpy interfacing options

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement, low priority

#8 - Memory leak related to default storage node creation

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago

#7 - separate original image from model input image

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 1 comment
Labels: enhancement

#6 - include segmentation post processing

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago - 3 comments
Labels: bug

#5 - using monai itkreader crashes slicer

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 2 comments
Labels: bug

#4 - Get access to vtk.util

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 7 comments

#3 - Separate xray views

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 4 comments

#2 - Include python dependencies in build

Issue - State: open - Opened by ebrahimebrahim almost 3 years ago
Labels: enhancement

#1 - Don't hardcode transform

Issue - State: closed - Opened by ebrahimebrahim almost 3 years ago - 1 comment
Labels: bug