kishwarshafin/helen issues and pull requests

#37 - helen polish UserWarning on batch size

Issue - State: open - Opened by lloydlowUOA over 2 years ago

#36 - there are no other mammal models other than human?

Issue - State: closed - Opened by xdkong over 3 years ago - 2 comments

#35 - Question about model's training data

Issue - State: closed - Opened by huangnengCSU almost 4 years ago - 2 comments

#34 - Only Polish interested sequences

Issue - State: closed - Opened by Yechao94 about 4 years ago - 3 comments

#33 - wrong script in example Usage in README.md

Issue - State: closed - Opened by li081766 about 4 years ago - 1 comment

#32 - Exception: process 6 terminated with signal SIGKILL

Issue - State: closed - Opened by utrivedi about 4 years ago - 5 comments

#31 - How to train a new model with in lab testing data

Issue - State: closed - Opened by yipukangda about 4 years ago - 2 comments

#30 - torch.set_num_threads error in docker image

Issue - State: closed - Opened by jmkidd about 4 years ago - 3 comments

#29 - MarginPolish output zero .fa file

Issue - State: closed - Opened by yangxiaofeill over 4 years ago - 9 comments

#28 - How to install helen in a gcc4.8 enrivments?

Issue - State: closed - Opened by biozhangzhou over 4 years ago - 3 comments

#27 - marginpolish docker stuck at 99%

Issue - State: closed - Opened by MichelMoser over 4 years ago - 13 comments
Labels: bug

#26 - Are existing models suitable to polish a high heterozygosity plant genome assemblies?

Issue - State: closed - Opened by xiekunwhy over 4 years ago - 3 comments

#25 - Add helen to bioconda.

Issue - State: closed - Opened by xiekunwhy over 4 years ago - 5 comments

#24 - Fixed elapsed time display

Pull Request - State: closed - Opened by esrice over 4 years ago

#23 - some problem occurs when evaluating the data of na12878 chromosome 21

Issue - State: closed - Opened by huangnengCSU over 4 years ago - 4 comments

#22 - Models for Guppy 3.6

Issue - State: closed - Opened by dominik-handler over 4 years ago - 2 comments

#21 - Pkg

Pull Request - State: closed - Opened by kishwarshafin over 4 years ago

#20 - Master2

Pull Request - State: closed - Opened by kishwarshafin over 4 years ago

#19 - Compatibility with draft assembly from other assemblers

Issue - State: closed - Opened by SHuang-Broad over 4 years ago - 3 comments

#18 - Issue on stitch.py

Issue - State: closed - Opened by nozabey almost 5 years ago - 7 comments

#17 - margin docker run fail

Issue - State: closed - Opened by lstxmu about 5 years ago - 27 comments

#16 - MarginPolish

Issue - State: closed - Opened by reiverjohn about 5 years ago - 3 comments

#15 - Plant species

Issue - State: closed - Opened by Jolvii85 about 5 years ago - 3 comments
Labels: discussion

#14 - HAC models

Issue - State: closed - Opened by MichelMoser over 5 years ago - 17 comments
Labels: discussion

#13 - Fix #12

Pull Request - State: closed - Opened by cgjosephlee over 5 years ago

#12 - output path and filename are not joined properly

Issue - State: closed - Opened by cgjosephlee over 5 years ago - 2 comments

#11 - run call.consensus..py fail

Issue - State: closed - Opened by lstxmu over 5 years ago - 40 comments
Labels: help wanted

#10 - h5 error

Issue - State: closed - Opened by MichelMoser over 5 years ago - 21 comments
Labels: bug

#9 - marginPolish option

Issue - State: closed - Opened by MichelMoser over 5 years ago - 3 comments
Labels: bug