Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / khanlab/snakebids issues and pull requests
#337 - Fix typo in BidsValidator plugin
Pull Request -
State: closed - Opened by pvandyken 10 months ago
Labels: bug
#336 - Overhaul `snakebids create`
Pull Request -
State: closed - Opened by pvandyken 10 months ago
- 6 comments
Labels: enhancement
#335 - Extension of `BidsComponent.filter` api
Issue -
State: open - Opened by pvandyken 10 months ago
#334 - Add deprecation mechanism to old pybidsdb vals
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug
#333 - `pybids_db_dir` was eliminated without warning, causing migration issues
Issue -
State: closed - Opened by pvandyken 11 months ago
- 2 comments
#332 - Refactor filter_list to use RegexContainer
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: maintenance
#331 - Add poetry lock check
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: maintenance
#330 - Update dependencies and pyright version
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: maintenance
#329 - Port documentation changes
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: skip_changelog
#328 - Update docs dependencies
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
#327 - Port hotfixes from 0.9.x
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug
#326 - Fix version fetching in readthedocs build
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: bug, documentation
#326 - Fix version fetching in readthedocs build
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: bug, documentation
#325 - HOTFIX Fix pybidsdb path resolution
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug
#325 - HOTFIX Fix pybidsdb path resolution
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug
#324 - Implement Bids Spec files
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: maintenance
#323 - Fix mistaken comparison of BidsEntity to str sets
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug, skip_changelog
#323 - Fix mistaken comparison of BidsEntity to str sets
Pull Request -
State: closed - Opened by pvandyken 11 months ago
Labels: bug, skip_changelog
#322 - Drop support for Python 3.7
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: breaking
#322 - Drop support for Python 3.7
Pull Request -
State: closed - Opened by pvandyken 11 months ago
- 1 comment
Labels: breaking
#321 - SnakeBidsApp Assumes filters are present
Issue -
State: open - Opened by pvandyken 11 months ago
Labels: bug
#320 - Update scipy constraints for py3.8
Pull Request -
State: closed - Opened by kaitj 11 months ago
- 3 comments
Labels: maintenance
#320 - Update scipy constraints for py3.8
Pull Request -
State: closed - Opened by kaitj 11 months ago
- 3 comments
Labels: maintenance
#319 - Scipy dependency
Issue -
State: closed - Opened by kaitj 11 months ago
Labels: bug
#319 - Scipy dependency
Issue -
State: closed - Opened by kaitj 11 months ago
Labels: bug
#317 - fixing small virtual env activation typo in tutorial.md
Pull Request -
State: closed - Opened by ataha24 about 1 year ago
Labels: documentation
#317 - fixing small virtual env activation typo in tutorial.md
Pull Request -
State: closed - Opened by ataha24 about 1 year ago
Labels: documentation
#316 - Update cookiecutter
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 4 comments
Labels: maintenance
#316 - Update cookiecutter
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 4 comments
Labels: maintenance
#315 - Drop Support for Py37
Issue -
State: closed - Opened by pvandyken about 1 year ago
- 1 comment
Labels: breaking
#315 - Drop Support for Py37
Issue -
State: closed - Opened by pvandyken about 1 year ago
- 1 comment
Labels: breaking
#314 - Allow Booleans in filter lists
Pull Request -
State: closed - Opened by pvandyken about 1 year ago
- 2 comments
Labels: bug
#313 - Use PEP 621-based pyproject.toml in snakebids create
Issue -
State: closed - Opened by tkkuehn about 1 year ago
- 3 comments
#312 - Add plugin reference page to docs
Pull Request -
State: closed - Opened by kaitj about 1 year ago
Labels: documentation
#311 - Plugins page in docs
Issue -
State: closed - Opened by kaitj about 1 year ago
Labels: documentation
#311 - Plugins page in docs
Issue -
State: closed - Opened by kaitj about 1 year ago
Labels: documentation
#310 - Always set SnakeBidsApp.args in run_snakemake
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
Labels: maintenance
#310 - Always set SnakeBidsApp.args in run_snakemake
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
Labels: maintenance
#309 - Boolean CLI filters
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
- 1 comment
Labels: enhancement
#309 - Boolean CLI filters
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
- 1 comment
Labels: enhancement
#308 - Save more provenance information
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
- 9 comments
Labels: enhancement
#307 - Update app creation instructions
Issue -
State: closed - Opened by kaitj about 1 year ago
- 2 comments
Labels: documentation
#307 - Update app creation instructions
Issue -
State: closed - Opened by kaitj about 1 year ago
- 2 comments
Labels: documentation
#306 - Update cookiecutter template
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 1 comment
Labels: maintenance
#306 - Update cookiecutter template
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 1 comment
Labels: maintenance
#305 - Test magic args
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
- 3 comments
Labels: test
#305 - Test magic args
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
- 3 comments
Labels: test
#304 - `export_sourcedir` plugin
Issue -
State: open - Opened by pvandyken about 1 year ago
- 1 comment
Labels: enhancement, plugin
#303 - exclude_participant_label and filter_component incompatible in some cases
Issue -
State: closed - Opened by tkkuehn about 1 year ago
#302 - Expect plugins to be callable classes
Issue -
State: open - Opened by tkkuehn about 1 year ago
- 1 comment
#302 - Expect plugins to be callable classes
Issue -
State: open - Opened by tkkuehn about 1 year ago
- 1 comment
#301 - Split bids into its own repository
Issue -
State: closed - Opened by tkkuehn about 1 year ago
- 1 comment
#300 - Add DuplicateComponentError for more precision
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
Labels: maintenance
#300 - Add DuplicateComponentError for more precision
Pull Request -
State: closed - Opened by tkkuehn about 1 year ago
Labels: maintenance
#299 - Need to Narrow down the `ValueError` thrown in `BidsDataset.from_iterable()`
Issue -
State: closed - Opened by pvandyken about 1 year ago
#299 - Need to Narrow down the `ValueError` thrown in `BidsDataset.from_iterable()`
Issue -
State: closed - Opened by pvandyken about 1 year ago
#298 - Update README
Pull Request -
State: closed - Opened by kaitj about 1 year ago
Labels: documentation
#297 - Raise error on missing `custom_path` and invalid `bids_dir`
Pull Request -
State: closed - Opened by kaitj about 1 year ago
Labels: maintenance
#296 - Update pybids_db parameters
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 1 comment
Labels: maintenance, deprecation
#296 - Update pybids_db parameters
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 1 comment
Labels: maintenance, deprecation
#295 - Make the target easier to override in plugins
Issue -
State: closed - Opened by pvandyken about 1 year ago
- 1 comment
Labels: enhancement
#294 - Allow builtins as types
Issue -
State: closed - Opened by pvandyken about 1 year ago
Labels: enhancement
#293 - Mandatory vs Optional components in `pybids_inputs`
Issue -
State: open - Opened by pvandyken about 1 year ago
- 2 comments
Labels: enhancement
#293 - Mandatory vs Optional components in `pybids_inputs`
Issue -
State: open - Opened by pvandyken about 1 year ago
- 2 comments
Labels: enhancement
#292 - Improve implementation of `get()` in `MultiSelectDict`
Issue -
State: open - Opened by pvandyken about 1 year ago
- 2 comments
Labels: enhancement
#291 - Add BidsValidator Plugin
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 4 comments
Labels: enhancement
#291 - Add BidsValidator Plugin
Pull Request -
State: closed - Opened by kaitj about 1 year ago
- 4 comments
Labels: enhancement
#285 - Implement extension support
Pull Request -
State: closed - Opened by pvandyken about 1 year ago
- 3 comments
Labels: enhancement
#285 - Implement extension support
Pull Request -
State: closed - Opened by pvandyken about 1 year ago
- 3 comments
Labels: enhancement
#284 - Implement `BidsPartialComponent`
Pull Request -
State: closed - Opened by pvandyken about 1 year ago
- 5 comments
Labels: enhancement
#283 - Restrict pybids bug check to python 3.7
Pull Request -
State: closed - Opened by pvandyken about 1 year ago
- 6 comments
Labels: maintenance
#270 - Why is `pybids_db_dir` commented in the boilerplate config?
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: maintenance
#270 - Why is `pybids_db_dir` commented in the boilerplate config?
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: maintenance
#269 - Confusing menagerie of names for pybids database
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: breaking
#269 - Confusing menagerie of names for pybids database
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: breaking
#264 - Expose `args` on `SnakeBidsApp` for plugins
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: enhancement
#264 - Expose `args` on `SnakeBidsApp` for plugins
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: enhancement
#262 - Deprecate `participant_label` and `exclude_participant_label` args
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 4 comments
Labels: deprecation, blocked
#259 - BIDS validation
Pull Request -
State: closed - Opened by kaitj over 1 year ago
- 8 comments
Labels: enhancement
#259 - BIDS validation
Pull Request -
State: closed - Opened by kaitj over 1 year ago
- 8 comments
Labels: enhancement
#258 - Extend boolean filtering to cli
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: enhancement
#256 - Automatically create pybidsdb
Issue -
State: open - Opened by pvandyken over 1 year ago
Labels: enhancement, plugin
#246 - Versioned `bids` functions
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: enhancement
#245 - Customizable `bids` function based on spec file
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 5 comments
Labels: enhancement
#244 - `BidsDataset` advanced component selection
Issue -
State: open - Opened by pvandyken over 1 year ago
- 1 comment
Labels: enhancement
#244 - `BidsDataset` advanced component selection
Issue -
State: open - Opened by pvandyken over 1 year ago
- 1 comment
Labels: enhancement
#243 - Implement `BidsPartialComponent`
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: enhancement
#243 - Implement `BidsPartialComponent`
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: enhancement
#241 - `BidsDataset.filter`
Issue -
State: open - Opened by pvandyken over 1 year ago
- 1 comment
Labels: enhancement
#236 - Breaking `BidsDataset` API Changes
Issue -
State: open - Opened by pvandyken over 1 year ago
Labels: breaking
#235 - Support `extension` in `bids()` function
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: bug
#235 - Support `extension` in `bids()` function
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: bug
#232 - Extending filtering to meta-data
Issue -
State: closed - Opened by Bradley-Karat over 1 year ago
- 2 comments
Labels: enhancement
#222 - integrate bids validator by default into snake bids
Issue -
State: closed - Opened by Remi-Gau over 1 year ago
- 5 comments
Labels: enhancement
#222 - integrate bids validator by default into snake bids
Issue -
State: closed - Opened by Remi-Gau over 1 year ago
- 5 comments
Labels: enhancement
#221 - add an easy way for user to add a README and dataset_description to their output
Issue -
State: open - Opened by Remi-Gau over 1 year ago
- 6 comments
Labels: enhancement
#219 - Missing `custom_path` when bids_dir invalid should throw error
Issue -
State: closed - Opened by pvandyken over 1 year ago
Labels: bug
#216 - `participant_label` applies subject filter to every single component
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 1 comment
Labels: bug
#206 - Expose snakemake as a script
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 2 comments
Labels: enhancement, wontfix
#205 - Saving more provenance information
Issue -
State: closed - Opened by pvandyken over 1 year ago
- 4 comments