Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / karissawhiting/oncokbr issues and pull requests
#29 - add gnomeverse annotation to readme
Pull Request -
State: open - Opened by stl2137 about 1 month ago
#28 - Variant Classifications in MSK IMPACT Not Found In Consequence Map
Issue -
State: open - Opened by david-nemirovsky 4 months ago
#28 - Variant Classifications in MSK IMPACT Not Found In Consequence Map
Issue -
State: open - Opened by david-nemirovsky 4 months ago
#27 - Update package to use httr2
Pull Request -
State: open - Opened by karissawhiting 4 months ago
#26 - Make utility functions to simplify repeated code
Issue -
State: open - Opened by karissawhiting 6 months ago
#25 - Compare Annotated Results from CDSI, Python Annotator and {oncokbR}
Issue -
State: open - Opened by karissawhiting 6 months ago
#24 - Annotator returns NAs when processing data from CDSI
Issue -
State: open - Opened by karissawhiting 8 months ago
#23 - All examples using annotate_mutations(oncokbR::blca_mutations[1:10, ]) produce error bc missing tumor_type var
Issue -
State: open - Opened by hfuchs5 9 months ago
#22 - Check Intragenic Loss as Fusion Type
Issue -
State: open - Opened by karissawhiting about 1 year ago
#21 - Make sure tumor type messaging is clear
Issue -
State: open - Opened by karissawhiting about 1 year ago
#20 - Check handling of intragenic fusions
Issue -
State: open - Opened by karissawhiting about 1 year ago
#19 - Check integration gnomeR
Pull Request -
State: closed - Opened by karissawhiting about 1 year ago
#18 - Unit tests
Pull Request -
State: closed - Opened by jflynn264 about 1 year ago
#17 - Document annotation output
Pull Request -
State: closed - Opened by jflynn264 about 1 year ago
#16 - Checks failed, wont run examples
Issue -
State: closed - Opened by jflynn264 about 1 year ago
#15 - variant_classification column not found
Issue -
State: open - Opened by JoanneF1229 about 1 year ago
- 1 comment
#14 - Add unit tests and check functionality & docs of functions
Issue -
State: open - Opened by karissawhiting about 1 year ago
#13 - Check results returned with and without tumor type parameter and document differences
Issue -
State: closed - Opened by karissawhiting about 1 year ago
- 1 comment
Labels: hackathon
#12 - Fix mentioned manuscripts
Pull Request -
State: closed - Opened by inodb about 1 year ago
#11 - Update Token Authentication
Issue -
State: open - Opened by karissawhiting about 1 year ago
Labels: hackathon
#10 - OncoKB Versions
Issue -
State: closed - Opened by jalavery almost 2 years ago
- 4 comments
Labels: hackathon
#9 - Questions For cBioPortal
Issue -
State: closed - Opened by karissawhiting about 2 years ago
#8 - Add sv annotation
Pull Request -
State: closed - Opened by karissawhiting about 2 years ago
#7 - Check SV processing
Issue -
State: closed - Opened by karissawhiting about 2 years ago
#6 - Add tumor type functionality
Issue -
State: closed - Opened by karissawhiting about 2 years ago
- 1 comment
#5 - Make package site
Issue -
State: closed - Opened by karissawhiting about 2 years ago
#4 - Add github actions
Issue -
State: closed - Opened by karissawhiting about 2 years ago
#3 - Update df returned by annotate mutations
Pull Request -
State: closed - Opened by slb2240 about 2 years ago
#2 - Return hugo gene symbol and gene variant in dataframe returned by annotate_mutations()
Issue -
State: closed - Opened by slb2240 about 2 years ago
#1 - Check oncokbR results against oncokb-annotator file annotation
Issue -
State: closed - Opened by karissawhiting about 2 years ago
Labels: hackathon