jtamames/SqueezeMeta issues and pull requests

#584 - can't find nr.db there, or it is corrupted

Issue - State: closed - Opened by Yaooo999 almost 2 years ago - 3 comments

#578 - The database download seems to be stuck in the LCA_tax step

Issue - State: closed - Opened by Yaooo999 almost 2 years ago - 5 comments

#576 - Large amount of unmapped reads

Issue - State: closed - Opened by fpusan almost 2 years ago - 1 comment

#571 - Restart keeps adding sample names at the end of contigs in merged mode?

Issue - State: closed - Opened by fpusan almost 2 years ago - 1 comment

#565 - Undefined subroutine &main::error_out called at 01.run_all_assemblies.pl line 231

Issue - State: closed - Opened by florekem almost 2 years ago - 7 comments

#561 - How to run in hybrid mode and how to pass multiple external assemblies into SqueezeMeta?

Issue - State: closed - Opened by gaworj almost 2 years ago - 1 comment

#559 - Run stops at diamond process

Issue - State: closed - Opened by sakcham almost 2 years ago - 21 comments

#553 - Trimmomatic option

Issue - State: closed - Opened by luozhy88 about 2 years ago - 11 comments

#547 - Error in STEP 14

Issue - State: closed - Opened by EorgeKit about 2 years ago - 12 comments

#506 - Support for EggNOG version 5.0.2

Issue - State: open - Opened by mdehollander over 2 years ago - 2 comments
Labels: enhancement, databases

#474 - Installing SQMtools in Windows or Mac (including RStudio)

Issue - State: closed - Opened by fpusan over 2 years ago - 3 comments
Labels: good first issue, SQMtools

#458 - Step 1.5 seqmerge crash

Issue - State: closed - Opened by phagelab over 2 years ago - 23 comments

#456 - Update SQMtools (and R recommendation) to >4.0

Issue - State: closed - Opened by fpusan over 2 years ago - 2 comments
Labels: enhancement

#448 - 10.mapsamples.pl. Program finished abnormally: consumes all RAM/SWAP while counting sequences...

Issue - State: closed - Opened by nucleoli2 over 2 years ago - 8 comments

#416 - sqm2tables.py - All fixes in one place :-)

Issue - State: open - Opened by biobrad over 2 years ago - 8 comments
Labels: SQMtools

Ecosyste.ms: Issues

GitHub / jtamames/SqueezeMeta issues and pull requests