jrderuiter/pybiomart issues and pull requests

#23 - Error querying biomart

Issue - State: open - Opened by joseph-siefert 9 months ago - 3 comments

#22 - Error in quering plant ensembl datasets

Issue - State: open - Opened by nikhilshinde0909 about 3 years ago

#21 - conversion between entrezgene to uniprot_gn_id

Issue - State: open - Opened by sunyi000 about 3 years ago

#20 - Problem with working old assemblies

Issue - State: open - Opened by himanshusingh2018 almost 4 years ago

#19 - problem with quering Ensembl Variation 101

Issue - State: open - Opened by motfalo about 4 years ago

#18 - Fixed urllib3 error.

Pull Request - State: open - Opened by dstrib over 4 years ago

#17 - problem with accessing mouse regulatory features

Issue - State: open - Opened by ooakley over 4 years ago - 1 comment

#16 - Bump requests from 2.9.1 to 2.20.0

Pull Request - State: open - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#15 - Using entrez gene id as filter

Issue - State: open - Opened by DeepaMahm about 5 years ago - 2 comments

#14 - external gene names cannot be used as filter

Issue - State: open - Opened by ChelseaCHENX about 5 years ago

#13 - Update environment.yml

Pull Request - State: open - Opened by ScarabMonkey about 5 years ago - 1 comment

#12 - pip should be listed in environment.yml

Issue - State: open - Opened by ScarabMonkey about 5 years ago

#11 - typo in usage docs

Pull Request - State: open - Opened by fbnrst about 5 years ago - 1 comment

#10 - Arguments `use_attr_names` and `dtypes` don't play well together

Issue - State: open - Opened by ivirshup over 5 years ago

#9 - Error on filter with many items (~100 elements) passed

Issue - State: open - Opened by ivirshup over 5 years ago - 1 comment

#8 - NAN's lead entrez ids to be considered as floats

Issue - State: open - Opened by samwindels over 5 years ago - 1 comment

#7 - fix filters

Pull Request - State: open - Opened by neolei over 5 years ago - 1 comment

#6 - Parity in filter options with biomaRt

Pull Request - State: open - Opened by ivirshup almost 6 years ago - 3 comments

#5 - Specify data types to Dataset.query

Pull Request - State: closed - Opened by moonso over 6 years ago - 4 comments

#4 - Allow to specify data types to panda

Issue - State: closed - Opened by moonso over 6 years ago

#3 - Does pybiomart support v0.9 of Biomart?

Issue - State: closed - Opened by uludag almost 8 years ago - 3 comments

#2 - Querying without attributes gives DataFrame with error message

Issue - State: closed - Opened by jrderuiter about 9 years ago - 1 comment

#1 - VirtualSchema not handled properly

Issue - State: closed - Opened by jrderuiter about 9 years ago

Ecosyste.ms: Issues

GitHub / jrderuiter/pybiomart issues and pull requests