Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / josiahseaman/FluentDNA issues and pull requests
#94 - 2.5.3 Natural Chromosome Layouts
Pull Request -
State: closed - Opened by josiahseaman over 4 years ago
#93 - Python 3.7+ issue with `os` import of `errno`
Issue -
State: closed - Opened by aganezov almost 5 years ago
- 4 comments
#92 - Pull Rename into Pip
Pull Request -
State: closed - Opened by josiahseaman almost 5 years ago
#91 - Fluentdna Rename
Pull Request -
State: closed - Opened by josiahseaman almost 5 years ago
#90 - The Big Rename: FluentDNA
Issue -
State: closed - Opened by josiahseaman almost 5 years ago
Labels: documentation
#89 - 2.4.5
Pull Request -
State: closed - Opened by josiahseaman almost 5 years ago
#88 - Compiling on Old Environments
Issue -
State: closed - Opened by josiahseaman almost 5 years ago
- 1 comment
Labels: documentation
#87 - I86 repeatmasker gallery
Pull Request -
State: closed - Opened by josiahseaman almost 5 years ago
#86 - Transposon View: Resurrecting RepeatMasker gallery
Issue -
State: closed - Opened by josiahseaman almost 5 years ago
Labels: enhancement, documentation
#85 - Graph Genomes: ODGI Matrix layout in FluentDNA
Issue -
State: closed - Opened by josiahseaman almost 5 years ago
- 2 comments
Labels: enhancement
#84 - Refactor: Allow MSA mouseover in mixed layouts
Issue -
State: open - Opened by josiahseaman almost 5 years ago
Labels: enhancement, documentation
#83 - 2.4.4: Usability and server improvement for Publication
Pull Request -
State: closed - Opened by josiahseaman almost 5 years ago
#82 - Alignment Stats: add syntenic versus translocations
Issue -
State: closed - Opened by josiahseaman about 5 years ago
Labels: enhancement
#81 - Publication Refinement
Issue -
State: closed - Opened by josiahseaman about 5 years ago
Labels: enhancement
#80 - Keep pip up to date
Pull Request -
State: closed - Opened by josiahseaman about 5 years ago
#79 - Update pip to 2.4.2
Pull Request -
State: closed - Opened by josiahseaman over 5 years ago
#78 - Chromosome Streaming
Issue -
State: open - Opened by josiahseaman over 5 years ago
Labels: enhancement
#77 - Reproducibility: Download links for all Data Sources
Issue -
State: closed - Opened by josiahseaman over 5 years ago
#76 - Nice Layout for Examples Gallery
Issue -
State: open - Opened by josiahseaman over 5 years ago
Labels: enhancement
#75 - GO TO Functionality on Webpage
Issue -
State: open - Opened by josiahseaman over 5 years ago
Labels: enhancement
#74 - Genome Alignment: Ref doesn't show gaps in translocations
Issue -
State: open - Opened by josiahseaman almost 6 years ago
Labels: bug
#73 - Ungapped index for Genome Alignment Mouseover
Issue -
State: open - Opened by josiahseaman almost 6 years ago
Labels: enhancement
#72 - Multiple sequence retrieval
Pull Request -
State: closed - Opened by josiahseaman almost 6 years ago
#71 - Sequence Retreival for Multiple Sequence Alignment
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
- 1 comment
Labels: enhancement
#70 - Ideogram: Mouse coordinate padding is off at the end of each chromatin fiber row
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
Labels: wontfix
#69 - Page not loading on 127.0.0.1 private network
Issue -
State: open - Opened by josiahseaman almost 6 years ago
Labels: bug, help wanted
#68 - Ideogram and sequence retrieval
Pull Request -
State: closed - Opened by josiahseaman almost 6 years ago
#67 - Machine learning backend
Issue -
State: open - Opened by photomedia almost 6 years ago
- 1 comment
Labels: enhancement
#66 - NucleotideNumber is showing even when pointing to label
Issue -
State: closed - Opened by photomedia almost 6 years ago
- 1 comment
Labels: bug
#65 - Clarity in Whole Genome Alignment
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
- 5 comments
Labels: enhancement
#64 - User defined Layout
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
#63 - Search: What is Practical and Useful?
Issue -
State: open - Opened by josiahseaman almost 6 years ago
Labels: enhancement
#62 - Restore sequence retrieval under mouse cursor
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
- 2 comments
Labels: enhancement
#61 - GFF3 support
Issue -
State: closed - Opened by josiahseaman almost 6 years ago
- 1 comment
Labels: enhancement, help wanted
#60 - Useful to developers: Outputting Gene Coordinates to CSV
Issue -
State: open - Opened by josiahseaman almost 6 years ago
Labels: enhancement, help wanted, documentation
#59 - Annotation Outlines have opacity side effects
Issue -
State: closed - Opened by josiahseaman about 6 years ago
- 4 comments
Labels: bug
#58 - www-data folder in GUI build
Issue -
State: closed - Opened by photomedia about 6 years ago
- 8 comments
#57 - Double copying fasta files when using --contigs
Issue -
State: open - Opened by josiahseaman about 6 years ago
Labels: bug
#56 - User Friendly Installation
Issue -
State: open - Opened by josiahseaman over 6 years ago
- 7 comments
Labels: enhancement
#55 - compilation error - hold_console_for_windows
Issue -
State: closed - Opened by photomedia over 6 years ago
- 3 comments
#54 - Runserver unresponsive
Issue -
State: open - Opened by josiahseaman over 6 years ago
#53 - Chromosome Poster - Ideogram Layout with Space filling curve
Issue -
State: open - Opened by josiahseaman over 6 years ago
- 3 comments
Labels: enhancement
#52 - User adjustable width.
Pull Request -
State: closed - Opened by josiahseaman over 6 years ago
#51 - Showing aligned sequence source as annotation
Issue -
State: closed - Opened by josiahseaman over 6 years ago
Labels: enhancement
#50 - Investigate Annotorious as an Annotation tool
Issue -
State: open - Opened by josiahseaman over 6 years ago
Labels: question
#49 - Project Website - Documentation
Issue -
State: closed - Opened by josiahseaman over 6 years ago
- 5 comments
Labels: bug, documentation
#48 - Mac max image size is much smaller (178 million pixels)
Issue -
State: open - Opened by josiahseaman over 6 years ago
Labels: question
#47 - Visual C++ dependency in Python 3.5+
Issue -
State: closed - Opened by josiahseaman over 6 years ago
- 2 comments
Labels: bug, help wanted
#46 - Running DDV2 in Windows
Issue -
State: closed - Opened by photomedia over 6 years ago
- 12 comments
#45 - Future: Just in time rendering
Issue -
State: open - Opened by josiahseaman over 6 years ago
- 1 comment
Labels: enhancement, wontfix
#44 - Color Zooming - best of both worlds
Issue -
State: open - Opened by josiahseaman over 6 years ago
- 1 comment
Labels: enhancement, help wanted
#43 - VCF file parser for RADseq
Issue -
State: open - Opened by josiahseaman over 6 years ago
#42 - Standalone DDV script that uses current python version
Issue -
State: open - Opened by josiahseaman over 6 years ago
Labels: enhancement
#41 - Correct legend for protein sequences
Issue -
State: closed - Opened by josiahseaman over 6 years ago
- 1 comment
Labels: enhancement
#40 - Include example data files and tests for users
Issue -
State: closed - Opened by josiahseaman over 6 years ago
- 1 comment
Labels: enhancement
#39 - Bug: Nucleotide Number mouse over doesn't make sense in some contexts
Issue -
State: closed - Opened by josiahseaman over 6 years ago
- 1 comment
Labels: bug, enhancement
#38 - Pip installable refactor
Pull Request -
State: closed - Opened by josiahseaman over 6 years ago
- 1 comment
#37 - Quick mode should create a webpage and launch a browser for large files
Issue -
State: open - Opened by josiahseaman almost 7 years ago
Labels: enhancement
#36 - Allow user to set fixed width from command line
Issue -
State: closed - Opened by josiahseaman almost 7 years ago
Labels: enhancement, question
#35 - Manage File Assets for Batch Processing of a Genome
Issue -
State: open - Opened by josiahseaman almost 8 years ago
Labels: enhancement
#34 - Multiple Reference Contigs in one Alignment Visualization
Issue -
State: open - Opened by josiahseaman almost 8 years ago
Labels: enhancement
#33 - Edit in Translocations
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
- 1 comment
#32 - Faster reverse complement
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
#31 - Allow Contig breaks (headers) in Parallel View
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
- 1 comment
#30 - Compile for Linux
Issue -
State: open - Opened by josiahseaman almost 8 years ago
#29 - Actual development merged to python-master
Pull Request -
State: closed - Opened by josiahseaman almost 8 years ago
#28 - Unique Sequence Visualization
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
Labels: enhancement
#27 - Annotation Layer ordering
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
Labels: enhancement, wontfix, minor
#26 - Toggleable annotation layers
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
Labels: wontfix
#25 - Listing of Available Annotation Overlays
Issue -
State: closed - Opened by josiahseaman almost 8 years ago
Labels: enhancement, wontfix
#24 - Summary Statistics
Issue -
State: open - Opened by BryanHurst about 8 years ago
#23 - Break alignment stats up into phases
Issue -
State: open - Opened by josiahseaman about 8 years ago
Labels: enhancement
#22 - Standalone executable
Issue -
State: open - Opened by josiahseaman about 8 years ago
#21 - DDV annotation pop over
Issue -
State: closed - Opened by josiahseaman about 8 years ago
Labels: enhancement, wontfix
#20 - Show only Exons in Gencode annotation
Issue -
State: closed - Opened by josiahseaman about 8 years ago
Labels: wontfix
#19 - SVG Display Demo in OpenSeaDragon
Issue -
State: closed - Opened by josiahseaman about 8 years ago
- 1 comment
#18 - Annotation display in DDV pages
Issue -
State: open - Opened by josiahseaman about 8 years ago
- 4 comments
Labels: enhancement
#17 - Double check accuracy of alignment
Issue -
State: closed - Opened by josiahseaman about 8 years ago
- 1 comment
Labels: bug
#16 - Move all FASTA sources to output specific folder
Issue -
State: closed - Opened by josiahseaman about 8 years ago
Labels: enhancement
#15 - Read chromosome contig from whole genome files
Issue -
State: closed - Opened by josiahseaman about 8 years ago
Labels: enhancement
#14 - Use all Alignment information from Chain Files
Issue -
State: closed - Opened by josiahseaman about 8 years ago
- 7 comments
Labels: enhancement
#13 - Generate Independent Visualization Pages from Python
Issue -
State: closed - Opened by josiahseaman about 8 years ago
Labels: enhancement
#12 - Generate FASTA from pairwise alignment "chain" files
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 6 comments
Labels: enhancement
#11 - Parallel Genomes Layout
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 5 comments
Labels: enhancement
#10 - Gallery Feature
Issue -
State: open - Opened by josiahseaman over 8 years ago
Labels: enhancement
#9 - Reallly Large Images
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 1 comment
Labels: enhancement
#8 - Text Labels for contigs
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 2 comments
Labels: enhancement
#7 - Multi-part FASTA File display
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 2 comments
#6 - Switch download service to VERSION instead of GI
Issue -
State: open - Opened by josiahseaman over 8 years ago
Labels: enhancement, minor
#5 - Interface naming robustness
Issue -
State: closed - Opened by josiahseaman over 8 years ago
Labels: bug, minor
#4 - Updated Mouse Tracking for Nucleotide Index
Issue -
State: closed - Opened by josiahseaman over 8 years ago
Labels: bug
#3 - Sharp lines on zoomed in pixels
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 1 comment
Labels: enhancement
#2 - New Tiled Layout
Issue -
State: closed - Opened by josiahseaman over 8 years ago
- 4 comments
Labels: enhancement
#1 - User Specified Column Width
Issue -
State: closed - Opened by josiahseaman over 8 years ago
Labels: enhancement