Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / jni/affinder issues and pull requests

#97 - WIP: Undo

Pull Request - State: open - Opened by jni 8 months ago

#96 - Add nap6 menu contributions

Pull Request - State: closed - Opened by jni 8 months ago

#94 - Restore missed points affine setting in callback

Pull Request - State: closed - Opened by jni 12 months ago - 1 comment

#93 - Closing the widget should close affinder

Issue - State: open - Opened by jni about 1 year ago

#92 - Need ability to undo point adding and effect of callbacks

Issue - State: open - Opened by jni about 1 year ago

#91 - Update tests to fix napari 0.4.19 errors

Pull Request - State: closed - Opened by jni about 1 year ago - 1 comment

#90 - Add txt file filter for saving output file

Pull Request - State: closed - Opened by andreasmarnold about 1 year ago - 1 comment

#89 - Limit "Select File" button for output to .txt files

Issue - State: closed - Opened by andreasmarnold about 1 year ago

#88 - Optionally delete points layers after finishing alignment

Pull Request - State: closed - Opened by andreasmarnold about 1 year ago - 5 comments

#87 - Fix metadata of new layer after applying transform

Pull Request - State: closed - Opened by andreasmarnold about 1 year ago - 1 comment

#86 - add pre commit

Pull Request - State: closed - Opened by jni about 1 year ago - 1 comment

#85 - Consider layer transform metadata when applying transform

Pull Request - State: closed - Opened by jni about 1 year ago - 1 comment

#84 - Add ability to load transformations from a file

Pull Request - State: closed - Opened by andreasmarnold over 1 year ago - 4 comments

#83 - Consider scale and translation in apply_tf

Pull Request - State: closed - Opened by andreasmarnold over 1 year ago - 3 comments

#82 - Consider scale and translation in apply_tf

Pull Request - State: closed - Opened by andreasmarnold over 1 year ago - 5 comments

#81 - Add documentation for applying a transform after finding it

Pull Request - State: open - Opened by jamesyan-git over 1 year ago - 2 comments

#80 - apply_affine does not correctly transform images for scales<1

Issue - State: closed - Opened by andreasmarnold over 1 year ago - 2 comments
Labels: bug

#78 - Add widget to apply transform and produce new layer

Pull Request - State: closed - Opened by andreasmarnold over 1 year ago - 2 comments

#77 - Adding layers with small scale values results in absurdly large points

Issue - State: open - Opened by jni over 1 year ago
Labels: good first issue

#76 - Widget idea: table showing current point coordinates and residuals for each point

Issue - State: open - Opened by jni over 1 year ago - 6 comments

#75 - Add widget to copy transforms between layers

Pull Request - State: closed - Opened by andreasmarnold over 1 year ago - 3 comments

#74 - Update metadata

Pull Request - State: closed - Opened by jni over 1 year ago - 1 comment

#73 - Hide private attribute access warnings from napari Viewer

Pull Request - State: closed - Opened by jni over 1 year ago - 1 comment

#72 - Extend affinder to 3D

Issue - State: open - Opened by marbre2 over 1 year ago - 2 comments

#71 - Use signal blocked context manager

Pull Request - State: closed - Opened by jni over 1 year ago

#70 - Update actions dependencies including aganders3/headless-gui

Pull Request - State: closed - Opened by jni over 1 year ago - 1 comment

#69 - Ensure reference and moving layers are different

Pull Request - State: closed - Opened by jni over 1 year ago - 1 comment

#68 - Add documentation URL to repo description

Issue - State: closed - Opened by GenevieveBuckley almost 2 years ago - 1 comment

#67 - Add documentation link to README

Pull Request - State: closed - Opened by GenevieveBuckley almost 2 years ago - 1 comment

#66 - Improve documentation, explaining how affinder works

Issue - State: open - Opened by jni almost 2 years ago

#65 - Change docs theme to Pydata Sphinx theme

Issue - State: open - Opened by jni over 2 years ago

#64 - Should add sample data

Issue - State: open - Opened by jni over 2 years ago

#63 - why not make the description the readme?

Issue - State: closed - Opened by tlambert03 over 2 years ago - 10 comments

#62 - removed python 3.7, added 3.10 to github workflow

Pull Request - State: closed - Opened by thanushipeiris almost 3 years ago - 2 comments

#61 - Transformation matrix with skimage.transform.warp

Issue - State: open - Opened by fjorka almost 3 years ago - 5 comments
Labels: documentation

#60 - Fix Windows GL CI install

Pull Request - State: closed - Opened by jni almost 3 years ago - 2 comments

#59 - Only run napari-hub preview on adding hub-preview label

Pull Request - State: closed - Opened by jni almost 3 years ago - 3 comments
Labels: hub-preview

#58 - 2d onto 3d with euclidean, similarity transforms

Pull Request - State: closed - Opened by thanushipeiris almost 3 years ago - 18 comments

#57 - refresh available layers in dropdown

Issue - State: closed - Opened by thanushipeiris almost 3 years ago - 1 comment

#56 - Add python script to convert mp4 links into html tags for documentation

Pull Request - State: closed - Opened by jamesyan-git almost 3 years ago - 2 comments

#55 - Add nojekyll file

Pull Request - State: closed - Opened by jamesyan-git almost 3 years ago - 1 comment

#54 - Allow the use of pre-existing points layers

Pull Request - State: closed - Opened by jni about 3 years ago - 1 comment

#53 - Add docs Build and Deploy

Pull Request - State: closed - Opened by jamesyan-git about 3 years ago - 2 comments

#52 - add tests for most layer types

Pull Request - State: closed - Opened by thanushipeiris about 3 years ago - 10 comments

#51 - Run tox under GabrielBB action which seems to be more stable

Pull Request - State: closed - Opened by jamesyan-git about 3 years ago - 1 comment

#50 - add existing points layer

Pull Request - State: closed - Opened by thanushipeiris about 3 years ago - 11 comments

#48 - Task: add tests for non-image alignment

Issue - State: open - Opened by jni about 3 years ago

#47 - aligning non-image layers

Pull Request - State: closed - Opened by thanushipeiris about 3 years ago - 1 comment

#46 - Migrate to npe2

Pull Request - State: closed - Opened by jamesyan-git about 3 years ago - 1 comment

#45 - add categories and preview page

Pull Request - State: closed - Opened by chili-chiu about 3 years ago - 2 comments

#44 - find packages in setup.cfg, fix wheel

Pull Request - State: closed - Opened by tlambert03 about 3 years ago - 5 comments

#43 - wheel building broken?

Issue - State: closed - Opened by tlambert03 about 3 years ago

#42 - Task: Allow aligning non-image layers

Issue - State: open - Opened by jni about 3 years ago

#41 - Allow alignment of mixed dimensionality layers

Issue - State: closed - Opened by jni about 3 years ago - 2 comments

#40 - Task: update to npe2

Issue - State: closed - Opened by jni about 3 years ago - 2 comments

#39 - src layout

Pull Request - State: closed - Opened by jni about 3 years ago - 1 comment

#38 - Update badges to point to main, not master

Pull Request - State: closed - Opened by jni about 3 years ago - 1 comment

#37 - Restore setuptools_scm functionality

Pull Request - State: closed - Opened by jni about 3 years ago - 1 comment

#36 - Add test based on basic example

Pull Request - State: closed - Opened by jni about 3 years ago - 3 comments

#35 - Update affinder for more recent napari

Pull Request - State: closed - Opened by jni about 3 years ago

#33 - Add ability to automatically refine alignment once approximate alignment is found

Issue - State: open - Opened by jni over 3 years ago - 1 comment

#32 - Change anchor link to use github flavoured markdown

Pull Request - State: closed - Opened by DragaDoncila over 3 years ago - 1 comment

#31 - Add description for napari hub

Pull Request - State: closed - Opened by DragaDoncila over 3 years ago - 2 comments

#30 - Don't use a magicgui widget as a global store for attributes

Issue - State: open - Opened by jni almost 4 years ago

#29 - Create close_affinder with magic_factory rather than magicgui

Issue - State: closed - Opened by jni almost 4 years ago

#28 - Use radio buttons for transformation model selection

Pull Request - State: closed - Opened by jni almost 4 years ago

#27 - Minor improvements

Pull Request - State: closed - Opened by jni almost 4 years ago - 1 comment

#26 - Tutorial

Pull Request - State: open - Opened by VolkerH about 4 years ago - 6 comments

#25 - multi-time-point multi-channel issues

Issue - State: open - Opened by VolkerH about 4 years ago - 1 comment

#24 - Type error: missing a required argument 'layers'

Issue - State: closed - Opened by VolkerH about 4 years ago - 3 comments

#23 - Show status

Issue - State: open - Opened by jwindhager about 4 years ago

#22 - Remember settings

Issue - State: open - Opened by jwindhager about 4 years ago - 1 comment

#21 - Show alignment certainty metric

Issue - State: open - Opened by jwindhager about 4 years ago

#20 - Difference visualization

Issue - State: open - Opened by jwindhager about 4 years ago - 1 comment

#19 - Support for coordinates file to be transformed

Issue - State: open - Opened by jwindhager about 4 years ago

#18 - Saving control points

Issue - State: open - Opened by jwindhager about 4 years ago - 2 comments

#17 - Add UI to pre-load existing transforms

Issue - State: open - Opened by jni about 4 years ago - 1 comment

#16 - Add ability to save affine transform as a txt

Pull Request - State: closed - Opened by jni about 4 years ago

#15 - Automatically adjust zoom levels

Pull Request - State: closed - Opened by jni about 4 years ago - 1 comment

#14 - Crosshairs

Issue - State: open - Opened by VolkerH about 4 years ago - 3 comments

#13 - Slight tweaks to structure and install

Pull Request - State: closed - Opened by jni about 4 years ago

#12 - Add proper napari dock widget plugin

Pull Request - State: closed - Opened by jni about 4 years ago - 16 comments

#11 - Option to "restart" annotation, use existing points layers

Issue - State: open - Opened by sofroniewn about 4 years ago - 3 comments

#10 - Use two modes to call/close affinder

Pull Request - State: closed - Opened by jni about 4 years ago - 1 comment

#9 - Option to delete point layers when finished

Issue - State: closed - Opened by jni about 4 years ago

#8 - Saving functionality

Issue - State: closed - Opened by jni about 4 years ago - 2 comments

#7 - Automatically set zoom to fit layer when switching layers

Issue - State: closed - Opened by jni about 4 years ago

#6 - Allow chaining transforms together

Pull Request - State: closed - Opened by jni about 4 years ago - 1 comment

#5 - Add support for n-dimensional points

Pull Request - State: closed - Opened by jni about 4 years ago - 1 comment

#4 - make napari plugin

Issue - State: closed - Opened by jni about 4 years ago - 1 comment

#3 - add n-dimensional support

Issue - State: closed - Opened by jni about 4 years ago

#2 - allow chaining of transforms

Issue - State: closed - Opened by jni about 4 years ago

#1 - don't create a dock widget within another

Issue - State: closed - Opened by jni about 4 years ago