jkitzes/macroeco issues and pull requests

#108 - Update project for Python 3+

Issue - State: closed - Opened by sgelias about 3 years ago - 5 comments

#107 - No module named 'models'

Issue - State: open - Opened by Zakher21 over 5 years ago - 4 comments

#106 - O-ring

Issue - State: closed - Opened by j538 almost 8 years ago - 2 comments

#105 - Allow spaces in column names in data tables

Issue - State: open - Opened by jkitzes almost 9 years ago
Labels: maybe

#104 - Port to Python 3

Issue - State: open - Opened by jkitzes almost 9 years ago
Labels: enhancement

#103 - Add continuous integration

Issue - State: open - Opened by jkitzes almost 9 years ago
Labels: maybe

#102 - Make plot in mecodesktop even if no model is fit

Issue - State: open - Opened by jkitzes about 9 years ago
Labels: enhancement

#101 - Clarify mecodesktop Run button is Save and Run

Issue - State: closed - Opened by jkitzes about 9 years ago - 1 comment
Labels: enhancement

#100 - Address inheritance of scipy docstrings more elegantly, if possible

Issue - State: closed - Opened by jkitzes about 9 years ago
Labels: enhancement

#99 - Deal with autodoc issues

Issue - State: open - Opened by jkitzes about 9 years ago - 1 comment
Labels: doc

#98 - Twiggy error not being displayed in log file

Issue - State: closed - Opened by mqwilber about 9 years ago - 2 comments

#97 - Warning thrown by df indexing in new pandas

Issue - State: closed - Opened by jkitzes about 9 years ago - 1 comment
Labels: bug

#96 - TestEmpiricalCDF error in new pandas

Issue - State: closed - Opened by jkitzes about 9 years ago - 1 comment
Labels: bug

#95 - Direct METE SAR upscaling has bug

Issue - State: closed - Opened by mqwilber about 9 years ago - 1 comment
Labels: bug

#94 - Add examples to docstrings

Issue - State: closed - Opened by mqwilber about 9 years ago - 2 comments
Labels: enhancement

#93 - Standalone Windows MacroecoDesktop?

Issue - State: open - Opened by jkitzes about 9 years ago - 1 comment
Labels: enhancement

#92 - Check that setup.py correctly installs dependencies (and has them all)

Issue - State: open - Opened by jkitzes over 9 years ago - 20 comments

#91 - Complete review of docs to clean up any TODOs and broken links

Issue - State: closed - Opened by jkitzes over 9 years ago - 5 comments

#90 - Add info on how to download MacroecoDesktop to Github repo readme

Issue - State: closed - Opened by jkitzes over 9 years ago
Labels: enhancement

#89 - Change subset_index file saved by MacroecoDesktop to split_index

Issue - State: closed - Opened by jkitzes over 9 years ago - 2 comments
Labels: wontfix

#88 - Change split behavior of SSAD

Issue - State: open - Opened by jkitzes over 9 years ago
Labels: enhancement

#87 - Bump version to 1.0 for first release

Issue - State: closed - Opened by jkitzes about 10 years ago - 1 comment
Labels: acceptance

#86 - Upload v0.3 to pypi

Issue - State: closed - Opened by jkitzes about 10 years ago - 1 comment
Labels: acceptance

#85 - lognorm gives error for multiple random numbers

Issue - State: closed - Opened by mqwilber about 10 years ago

#84 - Plot style namespace pollution

Issue - State: closed - Opened by jkitzes about 10 years ago - 1 comment
Labels: bug

#83 - Logser distribution needs unit tests

Issue - State: closed - Opened by jkitzes about 10 years ago - 7 comments
Labels: enhancement

#82 - Added discrete gamma and a few other additions

Pull Request - State: closed - Opened by mqwilber about 10 years ago

#81 - AIC column header in test_statistics has leading space

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: bug

#80 - Split does not work with strings

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: bug

#79 - Name collision: column names in csv and methods of dataframe

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: doc

#78 - Updates to documentation from Harte lab meeting

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: doc

#77 - Inconsistent incrementing in `empirical`

Issue - State: closed - Opened by mqwilber over 10 years ago - 1 comment
Labels: bug, enhancement

#76 - Rank distribution for models

Issue - State: open - Opened by mqwilber over 10 years ago - 1 comment

#75 - Nosetest data files not copied by setup.py

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: maybe

#74 - Add logser in addition to logser_uptrunc

Issue - State: closed - Opened by jkitzes over 10 years ago
Labels: enhancement

#73 - New distribution code clean up

Issue - State: closed - Opened by jkitzes over 10 years ago - 7 comments
Labels: enhancement

#72 - Move requirements.txt out to top level dir

Issue - State: open - Opened by jkitzes over 10 years ago

#71 - Make package dependencies more explicit

Issue - State: closed - Opened by mqwilber over 10 years ago - 6 comments

#70 - macroeco develop errors on import after building from source on Ubuntu 13.1

Issue - State: closed - Opened by ethanwhite over 10 years ago - 6 comments

#69 - Unit test exponential distributions

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#68 - Refactor empirical.o_ring

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#67 - Status of form_func and tests

Issue - State: closed - Opened by jkitzes over 10 years ago - 7 comments
Labels: enhancement

#66 - Text editor for metadata file?

Issue - State: closed - Opened by mqwilber over 10 years ago - 2 comments
Labels: doc

#65 - RAD log plot does not show zeros

Issue - State: open - Opened by jkitzes over 10 years ago

#64 - nbinom rank repeat?

Issue - State: closed - Opened by jkitzes over 10 years ago - 5 comments

#63 - Add text editor to GUI

Issue - State: closed - Opened by jkitzes over 10 years ago

#62 - Add plognorm, plognorm_ut

Issue - State: closed - Opened by jkitzes over 10 years ago - 3 comments
Labels: enhancement

#61 - Finish mete_sar or gen_sar

Issue - State: open - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#60 - Make format_dense take df and return df, then unit test

Issue - State: closed - Opened by jkitzes over 10 years ago - 3 comments
Labels: enhancement

#59 - Commit a static/data folder for test files and saved test output

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#58 - Complete remaining format functions

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: enhancement

#57 - Few comments and cleanup for format_dense

Issue - State: closed - Opened by jkitzes over 10 years ago - 3 comments
Labels: acceptance

#56 - Commit demo data folder for use in tutorials

Issue - State: closed - Opened by jkitzes over 10 years ago - 3 comments
Labels: doc

#55 - Figure out how to unit test main and do it

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: enhancement

#54 - Make main work with curves

Issue - State: closed - Opened by jkitzes over 10 years ago
Labels: enhancement

#53 - Refactoring review of main

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: acceptance

#52 - Cut down main output in distributions to just RAD

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#51 - Complete empirical sar, ear, comm_grid

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: enhancement

#50 - Complete addition and testing of all remaining empirical metrics

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: acceptance

#49 - Complete addition and testing of all remaining curves

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: acceptance

#48 - Complete addition and testing of all remaining distributions

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: acceptance

#47 - Clear all TODO's hanging out in code and move to issues

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: acceptance

#46 - Nested splits documentation

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: doc

#45 - Document how to import everything if desired

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: doc

#44 - Mark unit tests as slow

Issue - State: open - Opened by jkitzes over 10 years ago
Labels: acceptance

#43 - Merge updated compare and test compare

Pull Request - State: closed - Opened by mqwilber over 10 years ago

#42 - Try to implement super in distributions

Issue - State: open - Opened by jkitzes over 10 years ago

#41 - Justin and Mark code sprint mega-issue

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment

#40 - Convert single file modules to subdirs with init

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: enhancement

#39 - Complete setup.py with dependencies and other info for pypi

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#38 - Develop

Pull Request - State: closed - Opened by mqwilber over 10 years ago

#37 - Consider creating formal user stories/use cases to help design

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: maybe

#36 - New script format and runner that avoids duplication and simplifies workflow

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#35 - Add correct package dependency needs to `setup.py`

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: enhancement

#34 - Complete Sphinx documentation

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: doc

#32 - Have distributions inherit from rv_*

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#30 - Consider packaging GUI (ecopattern) using kivy

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: maybe

#29 - Consider simplifying metadata and parameters formats

Issue - State: closed - Opened by jkitzes over 10 years ago - 3 comments
Labels: maybe

#28 - Switch distributions.py notation to balls and urns

Issue - State: closed - Opened by jkitzes over 10 years ago - 1 comment
Labels: enhancement

#27 - Add logging to all modules

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: enhancement

#26 - Should make more liberal use of _ to mark private methods

Issue - State: closed - Opened by jkitzes over 10 years ago - 2 comments
Labels: acceptance

#25 - Iterative gen_sar solver fails when z = 0

Issue - State: closed - Opened by mqwilber almost 11 years ago - 2 comments
Labels: bug

#24 - Fix geo_series pdf

Issue - State: closed - Opened by jkitzes almost 11 years ago - 1 comment
Labels: bug

#23 - Update nbd lt

Pull Request - State: closed - Opened by mqwilber about 11 years ago - 4 comments

#21 - Review and refactor compare and output

Issue - State: closed - Opened by jkitzes over 11 years ago - 1 comment
Labels: enhancement

#20 - Where to store coordinates of columns?

Issue - State: open - Opened by jkitzes over 11 years ago - 2 comments
Labels: enhancement

#18 - Hide imported modules in our modules?

Issue - State: closed - Opened by jkitzes over 11 years ago - 2 comments
Labels: enhancement

#16 - Add Contributing guidelines

Issue - State: open - Opened by jkitzes over 11 years ago - 1 comment
Labels: enhancement

#14 - Give example code for empirical, compare, output, and distributions classes

Issue - State: closed - Opened by mqwilber over 11 years ago - 4 comments
Labels: doc

#12 - Implement presence and percent data types in Patch methods

Issue - State: open - Opened by jkitzes over 11 years ago - 1 comment
Labels: maybe

#11 - Documentation platform for package

Issue - State: closed - Opened by jkitzes over 11 years ago - 1 comment

#10 - Add commonality calculations to Patch

Issue - State: closed - Opened by jkitzes over 11 years ago - 1 comment
Labels: enhancement

#9 - Back calculate N from presence absence data at different scales just given two S's

Issue - State: open - Opened by jkitzes over 11 years ago - 2 comments
Labels: enhancement

#8 - Add sampling option to Patch or metrics in empirical

Issue - State: open - Opened by jkitzes over 11 years ago
Labels: enhancement

#7 - Logser_ut and _approx fail if S ~ N

Issue - State: closed - Opened by jkitzes over 11 years ago - 2 comments
Labels: enhancement

#5 - plognorm and plognorm_ut should be parameterize-able with S, N

Issue - State: closed - Opened by jkitzes over 11 years ago - 2 comments
Labels: enhancement

#4 - empirical does not support making multiple sars on one dataset

Issue - State: closed - Opened by jkitzes over 11 years ago - 1 comment
Labels: enhancement

#3 - fnbd fails does not provide expected result with some data

Issue - State: closed - Opened by jkitzes over 11 years ago - 2 comments
Labels: bug

#2 - Consider switching some code to Cython for speed

Issue - State: closed - Opened by jkitzes over 11 years ago - 3 comments
Labels: maybe

#1 - Check test suite on Windows using Anaconda

Issue - State: open - Opened by jkitzes over 11 years ago - 2 comments
Labels: acceptance

GitHub / jkitzes/macroeco issues and pull requests