Ecosyste.ms: Issues

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GitHub / jimmyodonnell/banzai issues and pull requests

#21 - Convert configuration file to INI format

Issue - State: open - Opened by jimmyodonnell over 6 years ago
Labels: enhancement

#21 - Convert configuration file to INI format

Issue - State: open - Opened by jimmyodonnell over 6 years ago
Labels: enhancement

#20 - Confirm that use of BLAST's `-max_target_seqs` is intentional

Issue - State: open - Opened by armish over 6 years ago

#20 - Confirm that use of BLAST's `-max_target_seqs` is intentional

Issue - State: open - Opened by armish over 6 years ago

#19 - two small fixes

Pull Request - State: closed - Opened by fmichonneau about 7 years ago - 3 comments

#19 - two small fixes

Pull Request - State: closed - Opened by fmichonneau about 7 years ago - 3 comments

#18 - Cutadapt is not parallel

Issue - State: open - Opened by jimmyodonnell about 7 years ago

#18 - Cutadapt is not parallel

Issue - State: open - Opened by jimmyodonnell about 7 years ago

#17 - derep_fasta_hash.py appears to truncate fasta headers at 45 characters

Issue - State: open - Opened by invertdna about 7 years ago - 6 comments

#17 - derep_fasta_hash.py appears to truncate fasta headers at 45 characters

Issue - State: open - Opened by invertdna about 7 years ago - 6 comments

#16 - Banzai without secondary indices

Issue - State: open - Opened by ramongallego over 7 years ago - 4 comments
Labels: enhancement

#16 - Banzai without secondary indices

Issue - State: open - Opened by ramongallego over 7 years ago - 4 comments
Labels: enhancement

#15 - Use named arguments in dereplication script

Issue - State: closed - Opened by jimmyodonnell over 7 years ago
Labels: enhancement

#15 - Use named arguments in dereplication script

Issue - State: closed - Opened by jimmyodonnell over 7 years ago
Labels: enhancement

#14 - Fails if missing R package

Issue - State: closed - Opened by jimmyodonnell over 7 years ago
Labels: bug

#14 - Fails if missing R package

Issue - State: closed - Opened by jimmyodonnell over 7 years ago
Labels: bug

#13 - derep_fasta.py

Issue - State: closed - Opened by invertdna over 7 years ago - 6 comments

#13 - derep_fasta.py

Issue - State: closed - Opened by invertdna over 7 years ago - 6 comments

#12 - logfile -- version number?

Issue - State: open - Opened by invertdna over 7 years ago - 5 comments
Labels: enhancement

#12 - logfile -- version number?

Issue - State: open - Opened by invertdna over 7 years ago - 5 comments
Labels: enhancement

#11 - error in creating duplicate table

Issue - State: closed - Opened by invertdna over 7 years ago - 4 comments

#11 - error in creating duplicate table

Issue - State: closed - Opened by invertdna over 7 years ago - 4 comments

#10 - Not really an issue

Issue - State: closed - Opened by ramongallego almost 8 years ago - 4 comments

#10 - Not really an issue

Issue - State: closed - Opened by ramongallego almost 8 years ago - 4 comments

#9 - Using compressed files as raw data

Issue - State: open - Opened by ramongallego about 8 years ago - 4 comments
Labels: bug, enhancement

#9 - Using compressed files as raw data

Issue - State: open - Opened by ramongallego about 8 years ago - 4 comments
Labels: bug, enhancement

#8 - document format for CSV file

Issue - State: open - Opened by fmichonneau about 8 years ago - 3 comments
Labels: enhancement

#8 - document format for CSV file

Issue - State: open - Opened by fmichonneau about 8 years ago - 3 comments
Labels: enhancement

#6 - code assumes already-pear'd data are in a single library

Issue - State: open - Opened by invertdna over 8 years ago

#6 - code assumes already-pear'd data are in a single library

Issue - State: open - Opened by invertdna over 8 years ago

#5 - Update provision.sh using jimmyodonnell repo

Pull Request - State: closed - Opened by MBARIMike about 9 years ago

#4 - provision.sh doesn't correctly install ncbi blast

Issue - State: closed - Opened by conchoecia over 9 years ago - 2 comments

#3 - Give link to Vagrant VirtualBox instructions from Jimmy's repo

Pull Request - State: closed - Opened by MBARIMike over 9 years ago - 3 comments

#2 - Vagrant install script

Pull Request - State: closed - Opened by MBARIMike over 9 years ago

#1 - Consolidate samples doesn't output correct number of tags

Issue - State: closed - Opened by jimmyodonnell about 10 years ago - 1 comment