jfarid27/graphtcga issues and pull requests

#77 - Updates 150126

Pull Request - State: closed - Opened by jfarid27 almost 10 years ago

#77 - Updates 150126

Pull Request - State: closed - Opened by jfarid27 almost 10 years ago

#76 - Consider removing motif column data from table

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#76 - Consider removing motif column data from table

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#75 - Change table headers to TF, Gene, motif, and zScore

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#75 - Change table headers to TF, Gene, motif, and zScore

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#74 - Remove database responses for negative z score

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#74 - Remove database responses for negative z score

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#73 - Add clickable zScore slider instead of histogram

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#73 - Add clickable zScore slider instead of histogram

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#72 - Add Transcription Factor only network visualization

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#72 - Add Transcription Factor only network visualization

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#71 - Histogram update

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#71 - Histogram update

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#70 - Link z-Score selector to visualization

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#70 - Link z-Score selector to visualization

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#69 - Redo visualization for tails only of z-Score selector

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#69 - Redo visualization for tails only of z-Score selector

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#68 - Front end rebuild

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#68 - Front end rebuild

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#67 - Server search refact

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#67 - Server search refact

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#66 - Add query for local interactions on server

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#66 - Add query for local interactions on server

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#65 - Move download link to selected collections pane

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#65 - Move download link to selected collections pane

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#64 - Add gene search to selected collections pane

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#64 - Add gene search to selected collections pane

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#63 - Add collection selection link to available collections table

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#62 - Build local network query for specified gene

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#62 - Build local network query for specified gene

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#61 - Add query to select significant edges to and from selected gene at specified level

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#61 - Add query to select significant edges to and from selected gene at specified level

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#60 - added geneCheckEmitter merge to pandaController.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#60 - added geneCheckEmitter merge to pandaController.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#59 - Add function to check if gene is significant in dataset at set significant level

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#59 - Add function to check if gene is significant in dataset at set significant level

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#58 - added default list of all files to scope pre search. fixes #55.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#58 - added default list of all files to scope pre search. fixes #55.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#57 - Fix issue 55

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#57 - Fix issue 55

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#56 - added axis labels to histogram. fixes #54.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#56 - added axis labels to histogram. fixes #54.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#55 - Add all available files to search list pre-search

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#55 - Add all available files to search list pre-search

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#54 - Add labels to histogram distribution graphics

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#54 - Add labels to histogram distribution graphics

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#53 - Added search capabilities for files.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#53 - Added search capabilities for files.

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#52 - refactor event wrappers to accept file parameters in environmentController

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#52 - refactor event wrappers to accept file parameters in environmentController

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#51 - refactor search to match on datasets instead of search corpus values

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#51 - refactor search to match on datasets instead of search corpus values

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#50 - refactor visualize graph to accept file parameter

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#50 - refactor visualize graph to accept file parameter

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#49 - refactor download graph to accept file parameter

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#49 - refactor download graph to accept file parameter

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#48 - remove selected file/folder from environment controller environment

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#48 - remove selected file/folder from environment controller environment

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#47 - Update file structure files to match updated data type

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#47 - Update file structure files to match updated data type

Issue - State: closed - Opened by jfarid27 about 10 years ago
Labels: enhancement

#46 - Asthetic updates

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#46 - Asthetic updates

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#45 - Db connector refact

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#45 - Db connector refact

Pull Request - State: closed - Opened by jfarid27 about 10 years ago

#44 - Add onHover for top 10 pageRanked list

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#44 - Add onHover for top 10 pageRanked list

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#43 - Add top 10 pageRanked nodes list

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#43 - Add top 10 pageRanked nodes list

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#42 - Add pagerank calculation for all visible nodes on download

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#42 - Add pagerank calculation for all visible nodes on download

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement, wontfix

#41 - Add dynamic z-score selector for graph visualization

Issue - State: closed - Opened by jfarid27 over 10 years ago - 1 comment
Labels: enhancement

#41 - Add dynamic z-score selector for graph visualization

Issue - State: closed - Opened by jfarid27 over 10 years ago - 1 comment
Labels: enhancement

#40 - Cytoscape addition

Pull Request - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#40 - Cytoscape addition

Pull Request - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#39 - Push all filestructure data in folders GET request

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#39 - Push all filestructure data in folders GET request

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#38 - Gephi TSV head is not adding to file output

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: bug

#38 - Gephi TSV head is not adding to file output

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: bug

#37 - Add Cytoscape graph window to front end

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#37 - Add Cytoscape graph window to front end

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#36 - Fix cytoscape json GET request in API factory

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#36 - Fix cytoscape json GET request in API factory

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#35 - Add cytoscape js to project deps

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#35 - Add cytoscape js to project deps

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#34 - Cli milestone

Pull Request - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#34 - Cli milestone

Pull Request - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#33 - Refactor 2

Pull Request - State: closed - Opened by jfarid27 over 10 years ago

#33 - Refactor 2

Pull Request - State: closed - Opened by jfarid27 over 10 years ago

#32 - Project module sprint 1

Pull Request - State: closed - Opened by jfarid27 over 10 years ago

#32 - Project module sprint 1

Pull Request - State: closed - Opened by jfarid27 over 10 years ago

#31 - Add defined thresholds for z-score and interaction weight

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#31 - Add defined thresholds for z-score and interaction weight

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#30 - add case for input data in and output to specified file name

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#30 - add case for input data in and output to specified file name

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#29 - add case file input agrument output to stdout

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#29 - add case file input agrument output to stdout

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#28 - add argument tab for interaction strength threshold and z-score threshold

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#28 - add argument tab for interaction strength threshold and z-score threshold

Issue - State: closed - Opened by jfarid27 over 10 years ago
Labels: enhancement

#27 - Add argument tab for port to start server

Issue - State: closed - Opened by jfarid27 over 10 years ago

GitHub / jfarid27/graphtcga issues and pull requests