jdrudolph/photon issues and pull requests

#44 - PHOTON-output issue

Issue - State: open - Opened by Rawan-Alnafisah over 1 year ago

#43 - Is this tool still supported?

Issue - State: open - Opened by ohovey5 almost 2 years ago - 1 comment

#42 - Issue with Generic network export

Issue - State: open - Opened by LLinda88 over 3 years ago

#41 - Photon error

Issue - State: open - Opened by dasaraslab over 3 years ago

#40 - Error - Future Warning

Issue - State: open - Opened by K-Boum over 3 years ago - 1 comment

#39 - Photon - Value cannot be null

Issue - State: open - Opened by LauraEKane1 over 3 years ago - 1 comment

#38 - Can not open the STRING Network for phosphoproteomic analysis

Issue - State: closed - Opened by shayankhozooei over 3 years ago - 1 comment

#37 - Can not find photon in Perseus

Issue - State: closed - Opened by Nazaninfarid over 3 years ago - 3 comments

#36 - Data Input

Issue - State: closed - Opened by IsalineMs almost 4 years ago - 1 comment

#35 - PHOTON suitable for latest Perseus version

Pull Request - State: open - Opened by danielaferretti1992 about 4 years ago - 2 comments

#34 - Photon analysis

Issue - State: closed - Opened by IsalineMs over 4 years ago - 1 comment

#33 - Error message for network analysis

Issue - State: open - Opened by bstankavich over 4 years ago - 13 comments

#32 - Error when using Python

Issue - State: open - Opened by IsalineMs over 4 years ago - 2 comments

#31 - Could not load type 'PerseusApi.Utils.PerseusFactory

Issue - State: closed - Opened by DoubleHelixAlchemist over 4 years ago - 2 comments

#30 - Perseus-PHOTON exsample data

Issue - State: open - Opened by wanghao1991217 over 4 years ago - 2 comments

#29 - I always got error message while processing Photon.

Issue - State: closed - Opened by PsuperGirl almost 5 years ago - 1 comment

#28 - Cannot proceed through (Network → From matrix → Basic → From matrix)

Issue - State: closed - Opened by Mindianli almost 5 years ago - 1 comment

#27 - AttributeError: 'NoneType' object has no attribute 'text'

Issue - State: open - Opened by DonnaOliviaD almost 5 years ago - 3 comments

#26 - Is Perseus the only way to use photon?

Issue - State: closed - Opened by biodavidjm almost 5 years ago - 2 comments

#25 - Issue during PHOTON reading parameter

Issue - State: closed - Opened by Sarkawt-Hamad about 5 years ago - 3 comments

#24 - excutor

Issue - State: closed - Opened by Sarkawt-Hamad about 5 years ago - 1 comment

#23 - Can't change column type

Issue - State: closed - Opened by cheininger over 5 years ago - 1 comment

#22 - PHOTON output error

Issue - State: closed - Opened by sjr24 over 5 years ago - 6 comments

#21 - Service Unavailable

Issue - State: closed - Opened by stgu1509 almost 6 years ago - 1 comment

#20 - Find annotation file from UniProt to ENSP

Issue - State: closed - Opened by LuisFranciscoHS almost 6 years ago - 1 comment

#19 - Two of three sidedness options producing errors

Issue - State: closed - Opened by jonhsussman over 6 years ago - 2 comments

#18 - Output error following tutorial with Perseus

Issue - State: closed - Opened by Jonathan-Davey over 6 years ago - 1 comment

#17 - Link to tutorial data appears broken

Issue - State: closed - Opened by 4000qtrap over 6 years ago - 1 comment

#16 - PHOTON Web server gives an ANAT error while ANAT Cytoscape plugin works OK

Issue - State: closed - Opened by ozgunbabur almost 7 years ago - 6 comments

#15 - Parametrize defaults

Pull Request - State: closed - Opened by jdrudolph about 7 years ago

#14 - processing fails at functional site prediction step

Issue - State: closed - Opened by biodavidjm about 7 years ago - 3 comments

#13 - [WIP] Perseus plugin

Pull Request - State: closed - Opened by jdrudolph about 7 years ago

#12 - Error on using custom data: Cannot have number of folds n_folds=10 greater than the number of samples: 3.

Issue - State: closed - Opened by sean-ocall over 7 years ago - 2 comments

#11 - Error when running with custom data: 'DataFrame' object has no attribute 'to_frame'

Issue - State: closed - Opened by ma-bio21 over 7 years ago - 2 comments

#10 - Phosphosite information

Issue - State: closed - Opened by Spacebio almost 8 years ago - 3 comments
Labels: question

#9 - PPI input data

Issue - State: closed - Opened by JessQuevza almost 8 years ago - 1 comment
Labels: question

#8 - Change PPI network

Issue - State: closed - Opened by linkerst almost 8 years ago - 4 comments

#7 - high-level task progress, issue #6

Pull Request - State: closed - Opened by jdrudolph almost 8 years ago

#6 - any progress indicator available?

Issue - State: closed - Opened by krzysztofpawlowskiWULS almost 8 years ago - 4 comments
Labels: question

#5 - Unable to complete job

Issue - State: closed - Opened by kestecker almost 8 years ago

#4 - Error after submitting data

Issue - State: closed - Opened by eliseneedham almost 8 years ago - 5 comments

#3 - windows server 2008

Issue - State: closed - Opened by AngristProteomics about 8 years ago - 5 comments
Labels: bug

#2 - Container stopps working immediately

Issue - State: closed - Opened by isas-institute about 8 years ago - 3 comments
Labels: bug

#1 - Description of output

Issue - State: closed - Opened by MarkusRinschen about 8 years ago - 1 comment
Labels: question

GitHub / jdrudolph/photon issues and pull requests